mRNA_S-ischiensis_contig104.1808.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.390e-57 Identity = 85/107 (79.44%), Postives = 98/107 (91.59%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRYY++Q YANH DAFDL TEDGRRFAQNGGQRVCTVLVYLNDV +GGCT+FP+L ++VQPR+G+AVVFFPATLDG LD LHAAEPA+DTKWVSQIW+RQG+Y
Sbjct: 177 QVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAY 283
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A835YJM0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJM0_9STRA) HSP 1 Score: 164 bits (414), Expect = 5.290e-49 Identity = 79/107 (73.83%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY Q YA HLDAFDL T+DG RFAQNGGQRV TVL+YLNDV GG TSFP+L L V PRRG+AVVFFP+TLDG D LALH AEPAVD K+VSQIW+RQG Y
Sbjct: 100 QVGRYLPTQFYAPHLDAFDLKTQDGMRFAQNGGQRVATVLIYLNDVPRGGNTSFPRLGLSVTPRRGMAVVFFPSTLDGCADELALHTAEPAVDVKYVSQIWIRQGLY 206
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A7S1UYE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYE3_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.320e-49 Identity = 78/107 (72.90%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY+ +Q Y H DAFDL+ EDGRRFA NGGQR TVLVYLNDV GG TSFP LNL VQPRRG+A+VFFPAT+DG LD +ALHAA PAVDTK+VSQ+W+RQG Y
Sbjct: 270 QVGRYFPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVHQGGATSFPALNLDVQPRRGMAIVFFPATVDGYLDKMALHAANPAVDTKYVSQVWIRQGEY 376
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A8J9TA93_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TA93_PHATR) HSP 1 Score: 161 bits (408), Expect = 1.750e-48 Identity = 75/107 (70.09%), Postives = 88/107 (82.24%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY+ +Q Y H DAFDL TEDG RFA NGGQR TVL+YLNDV+ GG T FP LNL VQPR+G+A+VFFPAT+DG LD +ALHAA PAVDTK+VSQ+W+RQG Y
Sbjct: 82 QVGRYFPSQQYLQHYDAFDLGTEDGLRFAANGGQRTITVLLYLNDVARGGATRFPALNLDVQPRQGMALVFFPATIDGMLDRMALHAAMPAVDTKYVSQVWIRQGHY 188
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A1Z5JHE4_FISSO (P4Hc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE4_FISSO) HSP 1 Score: 160 bits (404), Expect = 5.270e-47 Identity = 73/107 (68.22%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY+ + Y H DAFDL+TEDGRRFA NGGQR TVL+YLNDV GG T FP LNL +QPRRG+A+VFFPAT+DG LD +ALHAA PA+DTK+VSQ+W+RQ Y
Sbjct: 99 QVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIY 205
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A7S2YBM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBM7_9STRA) HSP 1 Score: 158 bits (400), Expect = 8.090e-47 Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY+++Q Y H DAFDL TEDG RFA NGGQR TVL+YLND GG T FP LNL VQPRRG+A+VFFPAT+DG LD +ALHAA PA+DTK+VSQ W+RQ +Y
Sbjct: 112 QVGRYFASQQYLQHFDAFDLGTEDGLRFAANGGQRTVTVLIYLNDCERGGGTRFPALNLEVQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKYVSQCWIRQSTY 218
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A6U0TVS1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TVS1_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.260e-46 Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY Q Y H DAFDL++EDGRRFA NGGQR T+LVYLNDVS GG T FP+LN++VQPRRG+A+VFFPAT+DGTLD + LHAA PAVD K+VSQ+W+RQ +Y
Sbjct: 194 QVGRYLPTQQYLQHFDAFDLSSEDGRRFASNGGQRTITILVYLNDVSTGGNTVFPRLNIQVQPRRGMALVFFPATVDGTLDKMTLHAALPAVDVKYVSQVWIRQTNY 300
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A7S3KY14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY14_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.240e-46 Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY ++Q Y H DAFDL+TEDGRRFA NGGQR TVL+YLNDV GG T FP LNL VQP RG+A++FFPAT+DG LD ++LHAA PAVDTK+VSQ+W+RQGSY
Sbjct: 280 QVGRYMASQQYLQHYDAFDLSTEDGRRFASNGGQRTITVLIYLNDVHQGGATRFPALNLDVQPVRGMALIFFPATIDGMLDQMSLHAALPAVDTKYVSQVWIRQGSY 386
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A8J2S9J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J3_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.850e-46 Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
+VGRY + Y H DAFD ++ DGRRFAQNGGQRV TVLVYLNDV+ GGCTSF KL L +QP++G A+VFFPA+LDG LD LHAAEPA+D KWVSQIW+RQ +Y
Sbjct: 124 QVGRYRGGEFYKAHYDAFDTSSPDGRRFAQNGGQRVATVLVYLNDVARGGCTSFSKLGLSIQPKKGTALVFFPASLDGMLDQHYLHAAEPALDLKWVSQIWIRQKAY 230
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Match: A0A7S2UA87_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA87_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.030e-45 Identity = 72/107 (67.29%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGCTSFPKLNLRVQPRRGVAVVFFPATLDGTLDPLALHAAEPAVDTKWVSQIWVRQGSY 321
++GRY +Q Y H DAFDL E GRRFA NGGQR TVL+YLNDV GG T+FP LNL V+PRRG+A+VFFPAT+DG LD +ALHAA PA+DTK+VSQ+W+RQG+Y
Sbjct: 145 QIGRYLPSQKYLQHFDAFDLGDEHGRRFASNGGQRTVTVLLYLNDVMNGGHTTFPSLNLEVKPRRGMAIVFFPATIDGYLDKMALHAALPAIDTKFVSQVWIRQGNY 251 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig104.1808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig104.1808.1 >prot_S-ischiensis_contig104.1808.1 ID=prot_S-ischiensis_contig104.1808.1|Name=mRNA_S-ischiensis_contig104.1808.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=107bp KVGRYYSNQHYANHLDAFDLATEDGRRFAQNGGQRVCTVLVYLNDVSAGGback to top mRNA from alignment at S-ischiensis_contig104:227261..227858+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig104.1808.1 ID=mRNA_S-ischiensis_contig104.1808.1|Name=mRNA_S-ischiensis_contig104.1808.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=598bp|location=Sequence derived from alignment at S-ischiensis_contig104:227261..227858+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig104:227261..227858+ >mRNA_S-ischiensis_contig104.1808.1 ID=mRNA_S-ischiensis_contig104.1808.1|Name=mRNA_S-ischiensis_contig104.1808.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=642bp|location=Sequence derived from alignment at S-ischiensis_contig104:227261..227858+ (Schizocladia ischiensis KU_0333)back to top |