mRNA_S-ischiensis_contig104.1805.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig104.1805.1
Unique NamemRNA_S-ischiensis_contig104.1805.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 4.380e-66
Identity = 178/280 (63.57%), Postives = 209/280 (74.64%), Query Frame = 1 
Query:   31 LSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDET-TTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKTDQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEAEDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLR--CLSFLPALPDR 861
            +S KE+ AAMASLEDADDVEAG+AL +EA ++  EFDE   +    XXXXXXXXXXXXXXXXX           XXXXX       KTD+ELEEEFAAWQA    PDV+ALE+SLAPIERY LRVRT+VDPYYSLY+RTEAQRREE E AGG+LDVDA+EAEKE+EE+RQME+GELLAC V  ++++ QR +F+RERAR V ERK+R +TG AWE R DA S   FW+N DTGEA WD P VV  REAH KAL  R+ G+PQPLLL+  C   +P +  R
Sbjct: 2244 MSEKELRAAMASLEDADDVEAGRALEREAADEQLEFDENGASSKDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFGDDKEKTDKELEEEFAAWQA---WPDVSALESSLAPIERYALRVRTDVDPYYSLYFRTEAQRREEIEAAGGDLDVDAIEAEKEMEERRQMESGELLACHVRIKDLKRQRDMFSRERARAVSERKKRLLTGDAWELRPDAVSKMPFWYNRDTGEAIWDKPHVVAAREAHAKALEERYSGLPQPLLLKDVCSGGVPTMVGR 2520
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.230e-60
Identity = 219/540 (40.56%), Postives = 270/540 (50.00%), Query Frame = 1 
Query:   79 DDVEAGQALLKEAVEDAREFDET--TTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKTDQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEAEDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRVSSTLEVSTAVRLLGESPPDPSRVTLELRGDAELRWVGPRAQGALAGTTLRR-RPAPAAXXXXXXXXXXXXXSGSSVVPALVPAKTTALHQMSAGGLAPAVLVSVSSGASLRLAACHLHNGSPDTSRESVAAATTTASAATQGPTTGASGPRESAAAACATGEGSGLFLDRCHVHAAPGDGVVAG 1689
            DDVEAG+AL KEA ++  EFDE   ++    XXXXXXXXXXXXXXXXX           XXXXX       KTD+ELEEEFAAWQ + VGPDV+ALE+SLAPIERY LRVRT+VDPYYSLY+RTEAQRREE E AGG+LDVDA+EAEKE+EE+RQME+GELLAC V  ++ + QR +F+RERAR V ERK+R +TG AWE R DA S   FW+N DTG+    + ++ L R                  L R + +L A PDR+  A  VC  W +GA H++F   VLPVEAGV                            L                                    L    AVR+LGE+  DPSRV +E+ G   +RW  P+  G + G +LRR RP P                                            L+ V SG +L+L+ACH++N                                E++     T   S LFL+RC V  A GDGV  G
Sbjct: 1923 DDVEAGRALEKEAADEQLEFDENGASSKDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFGDDKEKTDKELEEEFAAWQ-NKVGPDVSALESSLAPIERYALRVRTDVDPYYSLYFRTEAQRREEIEAAGGDLDVDAIEAEKEMEERRQMESGELLACHVRIKDSKRQRDMFSRERARAVSERKKRLLTGDAWELRPDAVSKMPFWYNRDTGDRTSFSRSIALSR------------------LQRVMRYLKATPDRMCAA-EVCQPWLEGARHKTFKLRVLPVEAGV-------------------RDAAALAQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLSSDRAVRILGEAT-DPSRVLVEMTGS--VRWTAPK--GLVVGVSLRRPRPCPDKGP----------------------------------------LIKVDSGGNLQLSACHVNNKQAG----------------------------EASPGLEVTDANSILFLERCRVQDARGDGVSCG 2350
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A7S4NI31_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI31_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.660e-50
Identity = 163/440 (37.05%), Postives = 214/440 (48.64%), Query Frame = 1 
Query:   22 EAELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKT---------------DQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEAEDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRVSST-LEVSTAVRLLGESPPDPSRVTLELRGDAELRWVGPRAQGALAGTTLRR 1293
            E +LS +++E AMASLED DDV+A Q   KEA E+ +EFDE                        DG   T G               KT               D  +E+EFAAWQ + VG D AA+ ASL P+ERY L  R E DP  SL  ++E Q  +EA    GE D++ +E  K  EE+R +E G+LLA    P  +  QR +F RE++RL  E+ RR++TG  WE R DA S + FWFNTDTGEA WD P V+L  EA   A   ++  +    L+  + +L   PDR+     VC  W   AT  SF K V PVE G  AL P                          L    + ++A+AL    PGDT+ L  GH+ V+   L + T +RL+G+   DPS V +EL G  +   V     G + G TLRR
Sbjct:  876 EEKLSKEQIENAMASLEDEDDVKAMQGAQKEAEEELQEFDEDVQYKENGEG--------------DGQDNTGGEEKKIKETKKPPAKKKTSKQPKPGKEEEKADVDDAMEKEFAAWQ-NKVGVDTAAINASLTPMERYALLFREEKDPSESLQLQSETQEMQEAASLEGEWDMEEIENAKMEEEKRAIEEGDLLATQPPPETLPRQRQLFAREKSRLRAEKLRRKLTGENWETRIDALSKSPFWFNTDTGEARWDKPLVLLGLEADALAHEKKWNALSMKPLVHVMEYLVPFPDRMR-CSAVCRQWRSAATDISFVKHVFPVEMGALALDPD------------------------KLGQNHYRTMAEALGEALPGDTIELGDGHYWVNDPGLHIKTPLRLIGDEN-DPSHVVIELSGSIDFDSVC----GWMEGVTLRR 1270
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A1Z5K378_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K378_FISSO)

HSP 1 Score: 203 bits (516), Expect = 1.590e-49
Identity = 154/424 (36.32%), Postives = 220/424 (51.89%), Query Frame = 1 
Query:   28 ELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKTDQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEA-EDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRVSSTLEVSTAVRLLGESPPDPSRVTLELRGDAELRWVGPRAQGALA-GTTLRR 1293
            E + +E+E+AMA LEDADDV A +   KEA ++ +EFDE+                        G  E                    D ELE+EFAAWQ   VG D A++EASL+P+ERYGL  R  VDP+YS+Y   E QR + A ++   E++VD ++ EK ++EQR ME G+LLA   EP ++  QR +F RERARL   +K R++TG  WE R DA +   FW+N D+GEA WD P  ++E EA  +A+  R+  +P   L+  +++L   PDR   A  +C  W   +   SF + V PVE G                                +    + ++ADA+AA  PGDT+ L  GH+ V+  LE+   +RL+G+   +P+ VT+E+ G   L W   +A+G    G T RR
Sbjct: 1462 EKAKEEMESAMACLEDADDVNALKGAQKEAEDELKEFDESIEYTNDSDPDDDPANKPPESNKEKGQKELA-----------KDSRPDDDFELEKEFAAWQ-DQVGADPASVEASLSPMERYGLNFRRNVDPFYSIYAVMEQQRLQVASQEQAEEVNVDDIQQEKMLDEQRAMEDGDLLATFPEPDDLVRQRSMFLRERARLRANKKLRKITGQDWEPRRDALTQAPFWYNVDSGEATWDKPKALIELEALDRAILERWSALPHQTLVHIMTYLVPYPDRQ-HASLMCRHWKKASCDLSFVRHVYPVEMGA------------------------YTREDSKIERNHYRNIADAVAASLPGDTIELGDGHYWVNDNLELQHPIRLIGDEH-NPANVTIEMGGT--LVW---KARGGFCEGITFRR 1842
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A7S3P8E0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P8E0_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.240e-48
Identity = 127/310 (40.97%), Postives = 175/310 (56.45%), Query Frame = 1 
Query:   28 ELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKTDQE-LEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRR-EEAEDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAG 951
            +++ +++E+AM  LED DDV+A +   KEA E+ +EFDET                       D                      K ++E LE+EFAAWQ   VG D  A+EASL+P+ERYGL +R +VDP+YSLY   E  R+ +EAE+A  E+D+DA+EAEK  +E+R    G+LL  D+ P E+  QR +F RERAR+    KRRQMTG  WE R D +  + F++N DTGEA WD P V+LE E+  +A  + +  +P   L+  +SFL   P+R+  A  VC  W   A   SF + V PVE G
Sbjct:   48 DMTTEQMESAMTELEDKDDVQALRGARKEAAEELKEFDETVEIKKEEGDDEDLEPKNESDREKD---------------------EKAEREALEKEFAAWQTE-VGMDNEAIEASLSPVERYGLHLREDVDPFYSLYAVLEYNRKMDEAEEAENEIDIDAIEAEKAEDERRAAMDGDLLVTDLMPEELVRQRNLFQRERARVKASMKRRQMTGENWEIRVDQQHHSSFYYNVDTGEARWDKPPVLLELESFNRASTVGWSMLPS--LVNVMSFLEPYPERMKAA-LVCGQWKKAAFDPSFVRHVYPVEMG 332
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A1Z5JCC1_FISSO (E1A-binding protein p400 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCC1_FISSO)

HSP 1 Score: 198 bits (504), Expect = 4.730e-48
Identity = 153/425 (36.00%), Postives = 221/425 (52.00%), Query Frame = 1 
Query:   28 ELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKTDQ-ELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEA-EDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRVSSTLEVSTAVRLLGESPPDPSRVTLELRGDAELRWVGPRAQGALA-GTTLRR 1293
            E + +++E+AMA LEDADDV A +   KEA ++ +EFDE+                       D                      ++D+ ELE+EFAAWQ + VG D A++EASL+P+ERYGL  R  VDP+YS+Y  TE QR   A ++   E++VD +  EK ++EQR ME G+LLA   EP ++  QR +F RERARL   +K R++TG  WE R DA +   FW+N D+GEA WD P  ++  EA  +A+  ++  +P   L+  +++L   PDR   A  +C  W   A   SF + V PVE G                                +    + ++ADA+AA  PGDT+ L  GH+ V+  LE+   VRL+G+   +P+ VT+E+ G   L W   +A+G    G T RR
Sbjct: 1470 EKTKEQMESAMACLEDADDVNALKGAQKEAEDELKEFDESIEYATESDPDDDPANKLPESKKKD------------KEQNEHTEDGRSDEVELEKEFAAWQ-NQVGADPASVEASLSPMERYGLNFRRNVDPFYSIYAITEHQRLHAASQEQSEEVNVDEIHQEKILDEQRAMEDGDLLATFPEPDDLVRQRSMFLRERARLRANKKLRKITGQDWEPRCDAFTQAPFWYNVDSGEATWDKPKALIALEALDRAILEKWGALPHQTLVHIMTYLVPFPDRQ-NASLMCRHWKKAACDLSFVRHVYPVEMGA------------------------YIREDSKIERNHYRNIADAVAASLPGDTIELGDGHYWVNDNLELHHPVRLIGDEH-NPANVTMEMGGT--LVW---KARGGFCEGITFRR 1850
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A4D9D1C0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1C0_9STRA)

HSP 1 Score: 186 bits (471), Expect = 5.050e-44
Identity = 181/421 (42.99%), Postives = 224/421 (53.21%), Query Frame = 1 
Query:   31 LSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKTDQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEAEDAGGE--LDVDALEAEKEVEEQRQMEAGELLAC--DVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRV----------SSTLEVSTAVRLLGESPPDPSRVTLELRGDAELRWVG 1251
            +SA+EV AAM ++ED  DV A +   KE  E+ REF+E       XXXXXXXXXXXXXXXX  G     G  G                  EEEFAA Q S +GPDV A+EA L P+ERY  R RTEVDPYYS +Y +E QRR E E+      +DV+ALE     EE R +E GE+LA   D+    V  Q   + RER R   E +RR MTG  W +  +A SG  +W + D+GEA WDTPAVV EREA  +A    F G+P P+L   L+FL A P RL  AG V   W   + H SFH  VL VE  V     P          XXXXXXXXX      + PG F ++A A+AAVE G T++L  GHH +          ++    S+A++      P P   +  L     LR VG
Sbjct: 1169 VSAQEVAAAMTAMEDEADVVAMKGAEKEGREELREFEEGGRAEGAXXXXXXXXXXXXXXXXLGGGKMEGGKEGEDGALG------------EEEFAAIQ-SQLGPDVGAIEARLRPVERYAFRFRTEVDPYYSFFYLSEEQRRRELEEEAEATAVDVEALERAAAEEEARSLEEGEVLATSMDMAREAVLLQAWGYRRERGRRRAEARRRAMTGENWVRMVEAGSGYPYWLDQDSGEACWDTPAVVTEREARARAREEGFAGLPAPVLRHLLAFLGA-PSRLR-AGEVSVRWRVASVHASFHARVLSVETAVAFARAPQAAASGTPSPXXXXXXXXXPPAQ-EVEPGVFLTLAAAVAAVEEGSTILLDPGHHWLDEVAPSPAPAANLAAPSSALQEASTETPAPPAPSFSLLVSKHLRLVG 1573
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A7S4EMN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMN4_9STRA)

HSP 1 Score: 178 bits (452), Expect = 7.340e-42
Identity = 143/426 (33.57%), Postives = 213/426 (50.00%), Query Frame = 1 
Query:   19 KEAELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKTDQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEAEDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRVSST-LEVSTAVRLLGESPPDPSRVTLELRGDAELRWVGPRAQGALAGTTLRR 1293
            K  ++S  E+E AMA+LED DD +A +   KEA ED +EFDE T            XXXXXXX       + T                  +++LE+EFAAWQ S  G D  A++  ++P+ERYGL+ R ++DP+YS++Y  E +R+ EA +   E+D++ +E +K +EEQ+ ++  +LLA  + P ++  QR ++ RE+ RL  E+ RR++TG  W Q+ D  +   FW+N +TGEA WDTP VV E  A   A R  +  +P  LL   + FL   P+R      VC  W    +   F   V P E G  A   P+                               ++ DALA   PGDT+ L  GH+ V+   + V   +R +G+   +P+ V +E+ G  +    G    G + G T RR
Sbjct:  908 KPQDISKDEMEEAMAALEDEDDAKALRGARKEAEEDQKEFDENTAIPKERSDDDEEXXXXXXXSKGKRKLKETKGRSGTESKPEGDEQNSDEKDLEKEFAAWQ-STEGFDAKAIDHFMSPMERYGLKFREKIDPFYSIFYINEQRRKMEAMEGAEEIDMEEVERQKAMEEQQAIDNQDLLATGIRPEDLVRQRNLYRREKIRLRSEKLRRKITGELWSQKVDGLTKKPFWYNEETGEATWDTPLVVAELRAEDLAAREGWGHLPIKLLTHIMGFLFPFPERQR-CSAVCRQWRIAVSDIRFVVHVYPAEMGALANRDPSKRHYNHHA-----------------------TIEDALANALPGDTIELGDGHYWVNDPGIIVDKPLRFVGDEN-NPANVVIEMSGSVQWTAKG----GWIEGITFRR 1303
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: A0A7S2NZ45_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZ45_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.040e-41
Identity = 137/427 (32.08%), Postives = 206/427 (48.24%), Query Frame = 1 
Query:   19 KEAELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAP----------ETTGVAGXXXXXXXXXXXXKTDQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEAEDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRVSSTLEVSTAVRLLGESPPDPSRVTLELRGDAELRWVGPRAQGA 1269
            +E E+++ ++E  MASLEDADDV+A +   KEA ++  EFDE                          AP          + + ++G            + +++LE+EFAAWQ S +G DV  + ASL P ERY L  R  VDPYYSLY+ TE ++  ++E    E D+DA+E  K  EE++ M+ G+LLA D  P  + +QR ++ RE+ RL   +KRR++TG  W  + +      FW+N DTGE   D P ++ + EA   A   ++  +P   L+R + +L   P+R+     VC  W+    H SF   VLPVE G                                L    + S+ DALA   PGDT+ L  GH+ V+  +EV   +R++G+   DP  +    RG     W+  R+  +
Sbjct:  865 EEKEINSADIENVMASLEDADDVQAMRGAQKEAQDELVEFDENVQFKADEESSQADDSVIENESQSS-APSLKKKGKIVSKKSSISGSDDSAEISKQ--QEEKDLEKEFAAWQNS-IGVDVETIRASLGPAERYALNFREAVDPYYSLYFLTETEKMNQSELTDQEWDIDAIEDAKIEEERQAMDDGDLLATDPHPMTLYKQRHLYRREKIRLKAAKKRRKLTGEDWVLKNEPTLPFSFWYNEDTGEVLLDKPRLIQDLEAEVSAREKKWNALPLTALVRIMCYLTPHPERMT-CSVVCRQWSLAGRHASFVLHVLPVEMGA-------------------------MLESTKLDHNHYRSIDDALATALPGDTIELGDGHYWVNKGMEVHKPLRIVGDEN-DPGTINWAKRGG----WMDERSNSS 1256
[Close]
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Match: K0RY45_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RY45_THAOC)

HSP 1 Score: 171 bits (433), Expect = 7.320e-40
Identity = 148/427 (34.66%), Postives = 215/427 (50.35%), Query Frame = 1 
Query:   28 ELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETTTXXXXXXXXXXXXXXXXXXXXXDGAPETTGVAGXXXXXXXXXXXXKT----DQELEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEAQRREEAE-DAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRLVFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPAVVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWADGATHQSFHKWVLPVEAGVPALPPPATXXXXXXXXXXXXXXXXXXXXLPSLAPGTFPSVADALAAVEPGDTVVLCSGHHRVSSTLEVSTAVRLLGESPPDPSRVTLELRGDAELRWVGPRAQGALAGTTLRR 1293
            +L+ +++E+AM  LEDADDV A Q+  +EA ED +EFD+                            +      XXXXXXXXXXXX      +Q++E+EFA WQ  A G D + ++ASL P+ERYGL V+  +DP++S YY  E QR E  + ++  ELD++ +E  K  EEQ+  E G+LL    +P  +  QR ++ RE+ARL  E   R++TG  W  + + RS  ++W+NTDTGEA W  P V+++ EA   A    +  +P  +L+    +L   P+R   A   C  W   A   SF   V PVE G   +    +                            F +VA+A+ +  PGDT+ +  G++ V S L V   V+L+G+   D  +V LE+ G  E R  G    G L G TL R
Sbjct:  496 DLNKEQLESAMNELEDADDVRAMQSAKQEAEEDLKEFDDARQGQDGEANDGGKSKKNVGTAKAKTVKKXXXXXXXXXXXXXXXXXXXXXXXEEQDMEKEFATWQKKA-GMDSSTIQASLNPLERYGLHVKEYIDPFFSKYYWEEQQRLETNQRNSISELDIEEIEQRKVNEEQKAFEDGDLLCTFPDPESLPRQRQLYIREKARLRSEIMIRKLTGRNWTTKVEDRSKRVYWYNTDTGEALWGKPQVLIDLEAEENARANGWSALPPNILIDIFDYLVPFPERTAAAAGTCRGWRLAANDPSFVLHVWPVELGALIMNESKSKKKQ------------------------FRTVAEAVESALPGDTIEMGDGNYYVKSGLVVDKPVKLVGDE--DNLKVNLEVGGTIEWRARG----GYLEGLTLHR 891
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig104.1805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKD6_9PHAE4.380e-6663.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTP0_ECTSI1.230e-6040.56Similar to E1a binding protein P400 (Partial) (Fra... [more]
A0A7S4NI31_9STRA1.660e-5037.05Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5K378_FISSO1.590e-4936.32Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S3P8E0_9STRA2.240e-4840.97Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A1Z5JCC1_FISSO4.730e-4836.00E1A-binding protein p400 n=1 Tax=Fistulifera solar... [more]
A0A4D9D1C0_9STRA5.050e-4442.99Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4EMN4_9STRA7.340e-4233.57Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S2NZ45_9STRA2.040e-4132.08Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
K0RY45_THAOC7.320e-4034.66Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig104contigS-ischiensis_contig104:182322..189373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score247.3
Seed ortholog evalue3.1e-62
Seed eggNOG ortholog2880.D7FTP0
KEGG koko:K11320
EggNOG free text desc.helicase activity
EggNOG OGsCOG0553@1,KOG0391@2759
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Exons7
Model size3021
Cds size3018
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815561.3440993-CDS-S-ischiensis_contig104:182323..1844631622815561.3440993-CDS-S-ischiensis_contig104:182323..184463Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 182324..184463 -
1695739770.898995-CDS-S-ischiensis_contig104:182323..1844631695739770.898995-CDS-S-ischiensis_contig104:182323..184463Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 182324..184463 -
1622815561.3603268-CDS-S-ischiensis_contig104:184935..1850891622815561.3603268-CDS-S-ischiensis_contig104:184935..185089Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 184936..185089 -
1695739770.9089272-CDS-S-ischiensis_contig104:184935..1850891695739770.9089272-CDS-S-ischiensis_contig104:184935..185089Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 184936..185089 -
1622815561.377537-CDS-S-ischiensis_contig104:185359..1855011622815561.377537-CDS-S-ischiensis_contig104:185359..185501Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 185360..185501 -
1695739770.918591-CDS-S-ischiensis_contig104:185359..1855011695739770.918591-CDS-S-ischiensis_contig104:185359..185501Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 185360..185501 -
1622815561.3942933-CDS-S-ischiensis_contig104:186360..1864341622815561.3942933-CDS-S-ischiensis_contig104:186360..186434Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 186361..186434 -
1695739770.9267926-CDS-S-ischiensis_contig104:186360..1864341695739770.9267926-CDS-S-ischiensis_contig104:186360..186434Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 186361..186434 -
1622815561.4130323-CDS-S-ischiensis_contig104:187095..1872671622815561.4130323-CDS-S-ischiensis_contig104:187095..187267Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 187096..187267 -
1695739770.93493-CDS-S-ischiensis_contig104:187095..1872671695739770.93493-CDS-S-ischiensis_contig104:187095..187267Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 187096..187267 -
1622815561.4265957-CDS-S-ischiensis_contig104:188107..1883321622815561.4265957-CDS-S-ischiensis_contig104:188107..188332Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 188108..188332 -
1695739770.9429138-CDS-S-ischiensis_contig104:188107..1883321695739770.9429138-CDS-S-ischiensis_contig104:188107..188332Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 188108..188332 -
1622815561.439227-CDS-S-ischiensis_contig104:189262..1893731622815561.439227-CDS-S-ischiensis_contig104:189262..189373Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 189263..189373 -
1695739770.9509566-CDS-S-ischiensis_contig104:189262..1893731695739770.9509566-CDS-S-ischiensis_contig104:189262..189373Schizocladia ischiensis KU_0333CDSS-ischiensis_contig104 189263..189373 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig104.1805.1prot_S-ischiensis_contig104.1805.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig104 182324..189373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig104.1805.1

>prot_S-ischiensis_contig104.1805.1 ID=prot_S-ischiensis_contig104.1805.1|Name=mRNA_S-ischiensis_contig104.1805.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=1006bp
VGSPSAKEAELSAKEVEAAMASLEDADDVEAGQALLKEAVEDAREFDETT
TTTPSKGDEDREEEATAAAGAADGAPETTGVAGSGAGAGEGEEREKTDQE
LEEEFAAWQASAVGPDVAALEASLAPIERYGLRVRTEVDPYYSLYYRTEA
QRREEAEDAGGELDVDALEAEKEVEEQRQMEAGELLACDVEPREVREQRL
VFTRERARLVRERKRRQMTGGAWEQRTDARSGTLFWFNTDTGEAGWDTPA
VVLEREAHTKALRLRFVGMPQPLLLRCLSFLPALPDRLLGAGRVCSAWAD
GATHQSFHKWVLPVEAGVPALPPPATATVSAAASATTTTATAPPPPLPSL
APGTFPSVADALAAVEPGDTVVLCSGHHRVSSTLEVSTAVRLLGESPPDP
SRVTLELRGDAELRWVGPRAQGALAGTTLRRRPAPAAAAPASAALVSASA
SGSSVVPALVPAKTTALHQMSAGGLAPAVLVSVSSGASLRLAACHLHNGS
PDTSRESVAAATTTASAATQGPTTGASGPRESAAAACATGEGSGLFLDRC
HVHAAPGDGVVAGAGASASLADCEVQGCGGAGLAAAPGGRAVARGSRLRR
NQGAGVRVDGGGAAWLERCDCSHNGAGPLVVRPGGSVPVSINNVCAAPPQ
PEAEPEPPAELASACAAGVSTAVRAASLAEPAAPAVPMQPAVAAAAAAAG
VAHTGTAAPAVAAAAAAAAPIPTVTAGPTAGLEAGMPVAVVASTAVAVAA
AAAAAPAPAAAPVATAEAPLNVSRGGAGPEAGPGVAMSERAGPLQVVAPT
VGAAAVGGAATPAALAAPGACRVPGIAAAAAAGPAPSAGSTTVAGAAVTA
PPAAVTGSAAAVAAAPIPEWRQLAAAPTPGMLPPHGTAGAAGATAGAGAA
GDAASARVDTAMGAGVAPGVLSQPAVGGTAQAGAVDTTGGEQGPGTGSGA
GAGAGAGVGAAVSPVLPMPQLPKGFRWLLPKRPRGGGSSRGGGGGAGFRG
GGSGSR
back to top

mRNA from alignment at S-ischiensis_contig104:182322..189373-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig104.1805.1 ID=mRNA_S-ischiensis_contig104.1805.1|Name=mRNA_S-ischiensis_contig104.1805.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7052bp|location=Sequence derived from alignment at S-ischiensis_contig104:182322..189373- (Schizocladia ischiensis KU_0333)
GTGGGCTCTCCATCTGCGAAGGAGGCAGAGCTGTCTGCCAAGGAGGTTGA
GGCAGCCATGGCCTCCCTGGAGGATGCGGATGACGTGGAGGCCGGCCAGG
CCCTGCTCAAGGTTGGTTTCTTTGTTTGTGTGATACAACCTTGCACTCAG
GTATACTATCTCGCACACAAGTGAGTTCCGGGCCCCATCCCGAATTGTAC
CTTGTGCGCAAGGTAAGTCATCAGGTAGTGTATGTGATGTGATGTGATGC
GTACACGAAAACGCTGTACAAATTCATAGTTTATCATAACATGACATCAC
TGCAGTAGCAAGCGCGTTAGTTCCACGGCAAGTAACGGGTACAGTAGGCG
CTGCTGCTGTACTGTGCAATAGTTCATTCCTTTGGATTCCATACTGTAGC
TGTAGCTGTAGGAAAGAAACGAATGCCCCATTTTCATCTCAAGGTATCGC
ATGGAAGCTTACAATACAATGGGATGTTAGAAGAATCCAGCTCTCAGAAG
AGCAAAGAATGCGCCTTTTCCGAGGCAAGAGTCCTTAAACAAGAATATAG
TCGGAGTTTTGCGAAAGCATCGAAACAGGAGTTGAATTACACTGTGTACT
GGAATAAGAGTACTGTGCTACTTGAGGCACAGTACGAGTAGACTCAGAGC
AGTGGGCGCTGCTGTCTGCTGTACTGTACTGTAGTGCAAAGCACTTTCAA
GGAAATAGTGTGTACAGTACAGTGCATAGTTGCCAAGTACTTCCAAGTAC
AGTGGTAGGATACAACAGCGGCGTGAATGGTCTCTGGGCTTTGCCAAGCA
GCATGTGGGCACTACCCTGCACAAGAGTACAGAGTCCGTACTGTGCAGTA
TTAATACTTGGGAAGGGATGAAGTACGGTAGTACTCGATGTGGGTATGCC
CCTCCATCCATGCATCCATGCACACCCCTCCACTCCTTCCCCCCTCTTCC
CCTGCCCCTCTCCCCCCGGGCACGCGTCGTCACAAGTTGTTCGGCACAGC
AAGCAACTCTTGAACCCCCCCCCCCCCCGGGCTGTTCACAGGAAGCCGTG
GAGGATGCCAGGGAGTTTGACGAAACTACCACCACAACACCTTCCAAGGG
GGACGAAGACCGGGAGGAGGAAGCCACGGCCGCCGCTGGTGCTGCGGATG
GCGCCCCTGAGACAACAGGGGTGGCGGGGTCGGGGGCGGGGGCAGGAGAG
GGGGAAGAGAGAGAGAAGACAGACCAGGAGCTGGAGGAAGAGTTTGCGGC
CTGGCAGGCAAGTGCTGTTCTGATGGGCACCATTTTTTGTTTTCGGGAGA
GGGCAGCTTTCTACCGTGCAAAGCAGTCCGCGCGGCGCTTGTGTTCCCCT
CCGTGCTGTTGGATTGATTTCTCGGTTTGGGCCGCGTGGTCAATCAATCA
GATGTGGCTGCACCAAGCAATAGGCAAGTGCTGTTTTGATGGGCACCATT
TTTTGTTTTTGGGAGAGGGCAGCTTTCTACCGTGCAAAGCAGTCCTCGCG
GCGCTTGTGTTCCCCTCCGTGCTGTTGGATTGATTTCTCGGTTTGGGCCG
CGTGGTCAATCAATCAGATGTGGCTGCACCAAGCAACTCAGATTTCGATC
GACCAACGAGATCGATCGACCCAGTTGTCTTGGCCAATCAAATCAACTCA
CAAGTACTCTCCGCACCCCCACACCCCCATAGTTCGCCTCCCACCCCGCG
GTGCTTGCCCCTCCCCCTCCTGGCCCTTGTATTTTCAAATTCCTGCCGCC
ACCCTTGCCCCCATGCGGCCGCTTGCAAGCCCATCTCTCGCGATGGGGGC
TACCGTGGCCAACACCCATAGCATGCGGTGGAGTGGCAGAGCCCTGAGCA
CCCCCCCCCTGCTTTCCTGCCGCCGCTGCCTCCATCCAAATAAGCGACTT
TTTGAGTGAACCCGCGTCCAACACGCTGCTGCCGCTGCCCTGAATATGCA
CTTTGTTCTGTGTGCCAACGATGATGGAGTGACAATGACCAATACGCCAG
CAACGGCAACCACAACCCCCGCCACAACACAAGCACACATGCACACACAC
ACACACCACACCACCACGAACGGCAACCAACGACAACGGCGAAACTACAG
AGCAAGGTCGGGCCCGATGTAGCGGCGCTAGAGGCCTCGCTGGCTCCCAT
TGAGCGCTATGGTCTGCGCGTCCGGACTGAGGTGGATCCCTACTACAGCC
TCTACTACCGCACGGAGGCGCAGCGGCGGGAGGAGGCGGAGGACGCGGGC
GGGGAGCTCGACGTAGACGCCTTGGAAGGTGATGTGGATGTACTACTAGC
CTTGCTGCGAACACCCTCTTCAAATTTGTTTGACATGATTCCAAGTATTA
ATTAACCTGCTCCGTCCCAGTTGAGGCGTGTGGTCAATGGTCTTGGGACA
ACGGCACACATGAGGTGAGTGCACATCCATACTTGTACACTTGCACAGTA
TGTACTCTTGTACTTCATGTACATGCAGCACTGGGAACTTCCAAGCGGAG
GAATCGCCTGCTGACTGAAGCACTGTATAGTGCAGTACTCGTACCCTGTT
TTTGTGCGCGTGTGTGCTTGCATGCATGCACCCATCTCATGACCTTCCTC
AATGCACACCAGTCTGTGACCCCGCCCCCCCCCCCCCAAACAAGACAATG
GAAAGACCATGCCGCAAGTGGGCCAGGCATGTACCTACTGTCGTTCGAAT
TAGTCATATCCCCCGGCCGTTGAGGCAAGCAAGACCACCTGAATAACAAT
TGGGCCCGTGTTTGGGGCCTGCCATGATCAGGGGAATCCGTGGCCGGACC
GGCCAACGGCGCAGCGAAACAAAGCGAAACGTTTTCCTTTTCCTGCTATT
TTCTCGGCTCTGTGCTCCTCCCGCCCACGCACTCTGCAATACTTAATGCC
GCTGTGCCATTCACAAATGGTGGTGTGTTTGTTGGGCAGCGGAGAAGGAG
GTGGAGGAGCAGCGTCAGATGGAGGCGGGGGAGCTGTTGGCGTGTGATGT
GGAGCCGCGGGAGGTGAGTGTGGATGTACTTGGAAGTACCAGTACTTTGA
AATGAAGTGCACAAAATACTTGGAAGTACTGTAGGCGTGCGAGGTGTGAA
TCCATTCCATGTCCGATGACTTGCCGCAGGAGACGTGCTGCTCTGCGTGC
ACGTATGCACGCACGCACAGGCAGACAGGCAGAATGACGGAATTACGCAT
GCACACGGACGCACGCGCACACACGCACGCACACACGCACGTGCGCATGC
ACTACGTGGATCTGTTCCGCACTGTACATGTTTACTGTACTTGGAGTACA
TGTTTACTGCACTTGTTACCGAGTACAGCGCTTCACGCACGTACGCCGTG
TGGAGCATGAGATCCGTGCACGGCGGGGGGGTACCCAACGGGGTACAGTC
GTCCCCGCTGTATGTCAGCACCAGATGAGTCAACACTCATCGCCGTGCAC
CCATTCGTTGACCTATCCCGGTGGGTTGGCTGTGTGTGTGGCTTCCAAAT
CAGGGCGATGGCGTCGATGTGGCTGGCCACGCACAACTCAGCAGGTGCAA
AAATGGGCGATTTTGGTGCGCACCCAGAGGTGGAATATTGTCAAACTTGT
GGTCTGCTACATGCAATGGTGTTTTCTCTGGGTCGAGGGGAGTCCATTGC
ACTACACTAGGGCAGCCAACTCCCTGTAGCCATCGAGAGATCGCCGTGTG
AAGTTAAGTCAACATCCCCGGCTAAGTCGCCATTTTCCACGCGTGATTCA
TGTGTTTTGACGTAAAGCGGGGATGACTATCATCAAGTGGTGGCGCCGAC
GCTCCCACCCCCGGTCCTCCGCATATGTTCCGCCACTGAATCTGCCCCGG
GACTTTTGGGCCGCACTGGTAGGTACGGGAGCAGCGGCTGGTCTTCACGA
GGGAACGCGCTCGCCTGGTGCGCGAGCGCAAGCGGCGGCAGATGACCGGG
GGTGCATGGGAGCAGCGCACGGACGCCCGCAGCGGGACGCTCTTCTGGTT
CAACACTGACACGGGTGAGATTTCCTTGTCCTCCTCCGCCGCCTCCCCCA
TCCCCCTCGTGCCCCCCCGCTCTCCCCCTCGCCCCCCTCCTCCCCCTCCT
CTCCCACCCCCACCCCCCCCCCGCTTCCCTCTCCCTCTACCCCCCCCCCC
CCGCCTCCGCCTCGTCTAAGCTTGTTGGTCGCCCGTGCATCCACACTCCC
ATGCCCCCTGCCGCCCTCTCCAGGCTCTCACTCCCCCCCCCCTCTGCCCC
CGGTGCCTGTGGGCCCCTCCCTGATCCGTTGCAGGAGAGGCGGGGTGGGA
CACCCCTGCCGTTGTCCTGGAGCGCGAGGCACACACAAAGGCCCTGCGTC
TCCGTTTTGTGGGTATGCCGCAGCCGCTGCTCCTCCGCTGCTTGTCCTTC
CTGCCCGCCCTCCCAGACCGCCTCCTGGGGGCTGGAAGGTGAGCCAGGGA
ATGGGGGGCGAATCGCATAAACTTGATGTGTGCAACGCACAGCTTGCCTT
AGCCCAGAGACTGTTGACCATTGAACGTGTGCGTGGTACTAACTCTACTC
ACGACCTGTCGTTCAACATAGCCGTCGGTGTGCATGGCCGACCAAACCCG
AACGTGCACATCAGGTGTTCACGTTCCATTGTGTACTACGTGTTTGATTT
TGCTTCAGGAGCCTCTTGTTGGAGAGTCGGTCTGTTTAGTGCCCACTGGT
TGAACCTGCCTGCCCAAGCCCACGCTGGTGCAAAGTGCAAGCAGGACGAA
CGAAAGAGAAGGAGCAAGCGATGAGTGCACGGCGTCGTACATGCACACAC
ACGCACACGCGCATGCGCACACACGCACGAACGAGTGCACACAGGCACAC
ATGCACACAAACACCATCGCACTTGCTTCCCGTCTCGCGGCTGCCTCGCC
TCGACCCCAGGGTATGCTCTGCCTGGGCAGACGGCGCCACCCACCAAAGC
TTCCACAAGTGGGTTCTCCCAGTGGAGGCAGGCGTGCCGGCACTACCGCC
CCCAGCCACCGCCACAGTGTCGGCGGCGGCGTCGGCGACAACGACGACAG
CAACAGCGCCCCCCCCCCCCCTGCCATCACTGGCGCCCGGGACCTTTCCT
TCGGTGGCGGACGCGCTGGCAGCGGTGGAGCCCGGCGACACTGTGGTACT
CTGTTCGGGCCACCACCGGGTTTCCTCCACCCTGGAGGTGTCCACGGCGG
TGCGCCTGCTGGGGGAGAGCCCTCCCGACCCATCCCGAGTCACCCTGGAG
CTGCGGGGCGACGCTGAGCTGCGCTGGGTGGGACCCCGGGCCCAGGGTGC
CCTGGCGGGCACCACACTCCGCCGCCGCCCCGCACCTGCTGCCGCGGCCC
CGGCCTCTGCAGCGCTGGTGTCGGCTTCAGCGTCAGGGTCATCGGTGGTG
CCGGCACTAGTGCCGGCAAAGACTACGGCGCTTCATCAGATGTCGGCGGG
GGGTCTGGCCCCGGCGGTTCTGGTGTCTGTGTCGAGCGGTGCCTCGCTGC
GCCTGGCCGCGTGCCACCTACATAACGGGTCCCCAGACACCTCCCGTGAG
TCTGTCGCCGCCGCCACCACCACCGCCAGCGCCGCCACCCAGGGCCCCAC
TACCGGGGCCTCAGGCCCCCGAGAATCTGCCGCGGCTGCGTGCGCCACTG
GCGAGGGCTCAGGCCTGTTTCTGGACCGCTGCCACGTGCACGCGGCGCCA
GGGGACGGCGTGGTCGCCGGGGCGGGTGCGTCGGCGTCCCTGGCGGACTG
TGAGGTGCAGGGCTGCGGCGGGGCGGGGCTGGCGGCGGCCCCCGGCGGCC
GGGCGGTGGCGCGGGGGTCGCGTCTGCGCCGCAACCAGGGCGCCGGCGTG
CGGGTCGACGGTGGCGGTGCCGCGTGGCTTGAGCGCTGTGACTGCTCACA
TAACGGAGCCGGGCCGCTGGTGGTGCGGCCTGGCGGCAGCGTGCCTGTGA
GCATCAACAATGTGTGCGCGGCACCGCCACAGCCGGAGGCGGAACCGGAA
CCGCCGGCAGAGCTGGCCTCTGCCTGCGCTGCCGGGGTTAGCACGGCCGT
GCGTGCCGCATCGCTTGCAGAACCAGCGGCGCCCGCAGTGCCCATGCAGC
CAGCGGTGGCTGCCGCGGCGGCAGCGGCAGGGGTGGCTCATACTGGCACC
GCCGCTCCTGCTGTTGCTGCTGCTGCTGCTGCCGCTGCACCAATTCCAAC
GGTGACCGCAGGGCCTACGGCGGGGCTGGAAGCTGGCATGCCGGTGGCGG
TGGTGGCATCCACGGCGGTGGCGGTGGCAGCGGCAGCAGCAGCAGCGCCA
GCGCCAGCAGCAGCACCGGTGGCCACAGCGGAGGCCCCCCTCAATGTTTC
CCGTGGGGGGGCTGGACCGGAGGCCGGGCCGGGGGTGGCCATGTCCGAGA
GGGCTGGGCCACTGCAGGTAGTGGCACCAACTGTTGGGGCAGCGGCAGTC
GGGGGGGCGGCAACACCTGCGGCTTTGGCAGCACCGGGGGCATGTCGGGT
GCCGGGGATCGCAGCGGCGGCGGCAGCCGGGCCTGCCCCATCGGCAGGCT
CAACGACTGTCGCGGGGGCTGCTGTGACTGCGCCTCCAGCGGCGGTCACG
GGCTCAGCGGCGGCGGTGGCGGCGGCACCGATACCAGAGTGGCGGCAGCT
GGCTGCGGCGCCGACACCAGGGATGCTGCCGCCACATGGAACCGCCGGGG
CTGCAGGGGCTACTGCGGGCGCAGGTGCCGCGGGCGACGCTGCCAGTGCA
CGAGTGGACACAGCGATGGGAGCTGGCGTGGCTCCTGGGGTTTTGAGCCA
GCCCGCAGTAGGGGGCACGGCTCAGGCAGGAGCAGTGGACACGACCGGAG
GCGAGCAAGGACCGGGCACCGGTTCAGGGGCGGGAGCGGGAGCGGGGGCA
GGTGTGGGGGCGGCTGTCTCCCCAGTGTTGCCCATGCCACAGCTCCCCAA
GGGTTTCCGTTGGTTGCTCCCCAAGCGGCCTCGGGGCGGCGGAAGCAGCC
GCGGCGGCGGTGGCGGCGCTGGTTTCCGGGGGGGGGGATCTGGGAGCAGG
GG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig104:182322..189373-

>mRNA_S-ischiensis_contig104.1805.1 ID=mRNA_S-ischiensis_contig104.1805.1|Name=mRNA_S-ischiensis_contig104.1805.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=6036bp|location=Sequence derived from alignment at S-ischiensis_contig104:182322..189373- (Schizocladia ischiensis KU_0333)
GTGGGCTCTCCATCTGCGAAGGAGGCAGAGCTGTCTGCCAAGGAGGTTGA
GGCAGCCATGGCCTCCCTGGAGGATGCGGATGACGTGGAGGCCGGCCAGG
CCCTGCTCAAGGTGGGCTCTCCATCTGCGAAGGAGGCAGAGCTGTCTGCC
AAGGAGGTTGAGGCAGCCATGGCCTCCCTGGAGGATGCGGATGACGTGGA
GGCCGGCCAGGCCCTGCTCAAGGAAGCCGTGGAGGATGCCAGGGAGTTTG
ACGAAACTACCACCACAACACCTTCCAAGGGGGACGAAGACCGGGAGGAG
GAAGCCACGGCCGCCGCTGGTGCTGCGGATGGCGCCCCTGAGACAACAGG
GGTGGCGGGGTCGGGGGCGGGGGCAGGAGAGGGGGAAGAGAGAGAGAAGA
CAGACCAGGAGCTGGAGGAAGAGTTTGCGGCCTGGCAGGCAAGTGCTGAA
GCCGTGGAGGATGCCAGGGAGTTTGACGAAACTACCACCACAACACCTTC
CAAGGGGGACGAAGACCGGGAGGAGGAAGCCACGGCCGCCGCTGGTGCTG
CGGATGGCGCCCCTGAGACAACAGGGGTGGCGGGGTCGGGGGCGGGGGCA
GGAGAGGGGGAAGAGAGAGAGAAGACAGACCAGGAGCTGGAGGAAGAGTT
TGCGGCCTGGCAGGCAAGTGCTGTCGGGCCCGATGTAGCGGCGCTAGAGG
CCTCGCTGGCTCCCATTGAGCGCTATGGTCTGCGCGTCCGGACTGAGGTG
GATCCCTACTACAGCCTCTACTACCGCACGGAGGCGCAGCGGCGGGAGGA
GGCGGAGGACGCGGGCGGGGAGCTCGACGTAGACGCCTTGGAAGGTCGGG
CCCGATGTAGCGGCGCTAGAGGCCTCGCTGGCTCCCATTGAGCGCTATGG
TCTGCGCGTCCGGACTGAGGTGGATCCCTACTACAGCCTCTACTACCGCA
CGGAGGCGCAGCGGCGGGAGGAGGCGGAGGACGCGGGCGGGGAGCTCGAC
GTAGACGCCTTGGAAGCGGAGAAGGAGGTGGAGGAGCAGCGTCAGATGGA
GGCGGGGGAGCTGTTGGCGTGTGATGTGGAGCCGCGGGAGCGGAGAAGGA
GGTGGAGGAGCAGCGTCAGATGGAGGCGGGGGAGCTGTTGGCGTGTGATG
TGGAGCCGCGGGAGGTACGGGAGCAGCGGCTGGTCTTCACGAGGGAACGC
GCTCGCCTGGTGCGCGAGCGCAAGCGGCGGCAGATGACCGGGGGTGCATG
GGAGCAGCGCACGGACGCCCGCAGCGGGACGCTCTTCTGGTTCAACACTG
ACACGGGTACGGGAGCAGCGGCTGGTCTTCACGAGGGAACGCGCTCGCCT
GGTGCGCGAGCGCAAGCGGCGGCAGATGACCGGGGGTGCATGGGAGCAGC
GCACGGACGCCCGCAGCGGGACGCTCTTCTGGTTCAACACTGACACGGGA
GAGGCGGGGTGGGACACCCCTGCCGTTGTCCTGGAGCGCGAGGCACACAC
AAAGGCCCTGCGTCTCCGTTTTGTGGGTATGCCGCAGCCGCTGCTCCTCC
GCTGCTTGTCCTTCCTGCCCGCCCTCCCAGACCGCCTCCTGGGGGCTGGA
AGGAGAGGCGGGGTGGGACACCCCTGCCGTTGTCCTGGAGCGCGAGGCAC
ACACAAAGGCCCTGCGTCTCCGTTTTGTGGGTATGCCGCAGCCGCTGCTC
CTCCGCTGCTTGTCCTTCCTGCCCGCCCTCCCAGACCGCCTCCTGGGGGC
TGGAAGGGTATGCTCTGCCTGGGCAGACGGCGCCACCCACCAAAGCTTCC
ACAAGTGGGTTCTCCCAGTGGAGGCAGGCGTGCCGGCACTACCGCCCCCA
GCCACCGCCACAGTGTCGGCGGCGGCGTCGGCGACAACGACGACAGCAAC
AGCGCCCCCCCCCCCCCTGCCATCACTGGCGCCCGGGACCTTTCCTTCGG
TGGCGGACGCGCTGGCAGCGGTGGAGCCCGGCGACACTGTGGTACTCTGT
TCGGGCCACCACCGGGTTTCCTCCACCCTGGAGGTGTCCACGGCGGTGCG
CCTGCTGGGGGAGAGCCCTCCCGACCCATCCCGAGTCACCCTGGAGCTGC
GGGGCGACGCTGAGCTGCGCTGGGTGGGACCCCGGGCCCAGGGTGCCCTG
GCGGGCACCACACTCCGCCGCCGCCCCGCACCTGCTGCCGCGGCCCCGGC
CTCTGCAGCGCTGGTGTCGGCTTCAGCGTCAGGGTCATCGGTGGTGCCGG
CACTAGTGCCGGCAAAGACTACGGCGCTTCATCAGATGTCGGCGGGGGGT
CTGGCCCCGGCGGTTCTGGTGTCTGTGTCGAGCGGTGCCTCGCTGCGCCT
GGCCGCGTGCCACCTACATAACGGGTCCCCAGACACCTCCCGTGAGTCTG
TCGCCGCCGCCACCACCACCGCCAGCGCCGCCACCCAGGGCCCCACTACC
GGGGCCTCAGGCCCCCGAGAATCTGCCGCGGCTGCGTGCGCCACTGGCGA
GGGCTCAGGCCTGTTTCTGGACCGCTGCCACGTGCACGCGGCGCCAGGGG
ACGGCGTGGTCGCCGGGGCGGGTGCGTCGGCGTCCCTGGCGGACTGTGAG
GTGCAGGGCTGCGGCGGGGCGGGGCTGGCGGCGGCCCCCGGCGGCCGGGC
GGTGGCGCGGGGGTCGCGTCTGCGCCGCAACCAGGGCGCCGGCGTGCGGG
TCGACGGTGGCGGTGCCGCGTGGCTTGAGCGCTGTGACTGCTCACATAAC
GGAGCCGGGCCGCTGGTGGTGCGGCCTGGCGGCAGCGTGCCTGTGAGCAT
CAACAATGTGTGCGCGGCACCGCCACAGCCGGAGGCGGAACCGGAACCGC
CGGCAGAGCTGGCCTCTGCCTGCGCTGCCGGGGTTAGCACGGCCGTGCGT
GCCGCATCGCTTGCAGAACCAGCGGCGCCCGCAGTGCCCATGCAGCCAGC
GGTGGCTGCCGCGGCGGCAGCGGCAGGGGTGGCTCATACTGGCACCGCCG
CTCCTGCTGTTGCTGCTGCTGCTGCTGCCGCTGCACCAATTCCAACGGTG
ACCGCAGGGCCTACGGCGGGGCTGGAAGCTGGCATGCCGGTGGCGGTGGT
GGCATCCACGGCGGTGGCGGTGGCAGCGGCAGCAGCAGCAGCGCCAGCGC
CAGCAGCAGCACCGGTGGCCACAGCGGAGGCCCCCCTCAATGTTTCCCGT
GGGGGGGCTGGACCGGAGGCCGGGCCGGGGGTGGCCATGTCCGAGAGGGC
TGGGCCACTGCAGGTAGTGGCACCAACTGTTGGGGCAGCGGCAGTCGGGG
GGGCGGCAACACCTGCGGCTTTGGCAGCACCGGGGGCATGTCGGGTGCCG
GGGATCGCAGCGGCGGCGGCAGCCGGGCCTGCCCCATCGGCAGGCTCAAC
GACTGTCGCGGGGGCTGCTGTGACTGCGCCTCCAGCGGCGGTCACGGGCT
CAGCGGCGGCGGTGGCGGCGGCACCGATACCAGAGTGGCGGCAGCTGGCT
GCGGCGCCGACACCAGGGATGCTGCCGCCACATGGAACCGCCGGGGCTGC
AGGGGCTACTGCGGGCGCAGGTGCCGCGGGCGACGCTGCCAGTGCACGAG
TGGACACAGCGATGGGAGCTGGCGTGGCTCCTGGGGTTTTGAGCCAGCCC
GCAGTAGGGGGCACGGCTCAGGCAGGAGCAGTGGACACGACCGGAGGCGA
GCAAGGACCGGGCACCGGTTCAGGGGCGGGAGCGGGAGCGGGGGCAGGTG
TGGGGGCGGCTGTCTCCCCAGTGTTGCCCATGCCACAGCTCCCCAAGGGT
TTCCGTTGGTTGCTCCCCAAGCGGCCTCGGGGCGGCGGAAGCAGCCGCGG
CGGCGGTGGCGGCGCTGGTTTCCGGGGGGGGGGATCTGGGAGCAGGGGTA
TGCTCTGCCTGGGCAGACGGCGCCACCCACCAAAGCTTCCACAAGTGGGT
TCTCCCAGTGGAGGCAGGCGTGCCGGCACTACCGCCCCCAGCCACCGCCA
CAGTGTCGGCGGCGGCGTCGGCGACAACGACGACAGCAACAGCGCCCCCC
CCCCCCCTGCCATCACTGGCGCCCGGGACCTTTCCTTCGGTGGCGGACGC
GCTGGCAGCGGTGGAGCCCGGCGACACTGTGGTACTCTGTTCGGGCCACC
ACCGGGTTTCCTCCACCCTGGAGGTGTCCACGGCGGTGCGCCTGCTGGGG
GAGAGCCCTCCCGACCCATCCCGAGTCACCCTGGAGCTGCGGGGCGACGC
TGAGCTGCGCTGGGTGGGACCCCGGGCCCAGGGTGCCCTGGCGGGCACCA
CACTCCGCCGCCGCCCCGCACCTGCTGCCGCGGCCCCGGCCTCTGCAGCG
CTGGTGTCGGCTTCAGCGTCAGGGTCATCGGTGGTGCCGGCACTAGTGCC
GGCAAAGACTACGGCGCTTCATCAGATGTCGGCGGGGGGTCTGGCCCCGG
CGGTTCTGGTGTCTGTGTCGAGCGGTGCCTCGCTGCGCCTGGCCGCGTGC
CACCTACATAACGGGTCCCCAGACACCTCCCGTGAGTCTGTCGCCGCCGC
CACCACCACCGCCAGCGCCGCCACCCAGGGCCCCACTACCGGGGCCTCAG
GCCCCCGAGAATCTGCCGCGGCTGCGTGCGCCACTGGCGAGGGCTCAGGC
CTGTTTCTGGACCGCTGCCACGTGCACGCGGCGCCAGGGGACGGCGTGGT
CGCCGGGGCGGGTGCGTCGGCGTCCCTGGCGGACTGTGAGGTGCAGGGCT
GCGGCGGGGCGGGGCTGGCGGCGGCCCCCGGCGGCCGGGCGGTGGCGCGG
GGGTCGCGTCTGCGCCGCAACCAGGGCGCCGGCGTGCGGGTCGACGGTGG
CGGTGCCGCGTGGCTTGAGCGCTGTGACTGCTCACATAACGGAGCCGGGC
CGCTGGTGGTGCGGCCTGGCGGCAGCGTGCCTGTGAGCATCAACAATGTG
TGCGCGGCACCGCCACAGCCGGAGGCGGAACCGGAACCGCCGGCAGAGCT
GGCCTCTGCCTGCGCTGCCGGGGTTAGCACGGCCGTGCGTGCCGCATCGC
TTGCAGAACCAGCGGCGCCCGCAGTGCCCATGCAGCCAGCGGTGGCTGCC
GCGGCGGCAGCGGCAGGGGTGGCTCATACTGGCACCGCCGCTCCTGCTGT
TGCTGCTGCTGCTGCTGCCGCTGCACCAATTCCAACGGTGACCGCAGGGC
CTACGGCGGGGCTGGAAGCTGGCATGCCGGTGGCGGTGGTGGCATCCACG
GCGGTGGCGGTGGCAGCGGCAGCAGCAGCAGCGCCAGCGCCAGCAGCAGC
ACCGGTGGCCACAGCGGAGGCCCCCCTCAATGTTTCCCGTGGGGGGGCTG
GACCGGAGGCCGGGCCGGGGGTGGCCATGTCCGAGAGGGCTGGGCCACTG
CAGGTAGTGGCACCAACTGTTGGGGCAGCGGCAGTCGGGGGGGCGGCAAC
ACCTGCGGCTTTGGCAGCACCGGGGGCATGTCGGGTGCCGGGGATCGCAG
CGGCGGCGGCAGCCGGGCCTGCCCCATCGGCAGGCTCAACGACTGTCGCG
GGGGCTGCTGTGACTGCGCCTCCAGCGGCGGTCACGGGCTCAGCGGCGGC
GGTGGCGGCGGCACCGATACCAGAGTGGCGGCAGCTGGCTGCGGCGCCGA
CACCAGGGATGCTGCCGCCACATGGAACCGCCGGGGCTGCAGGGGCTACT
GCGGGCGCAGGTGCCGCGGGCGACGCTGCCAGTGCACGAGTGGACACAGC
GATGGGAGCTGGCGTGGCTCCTGGGGTTTTGAGCCAGCCCGCAGTAGGGG
GCACGGCTCAGGCAGGAGCAGTGGACACGACCGGAGGCGAGCAAGGACCG
GGCACCGGTTCAGGGGCGGGAGCGGGAGCGGGGGCAGGTGTGGGGGCGGC
TGTCTCCCCAGTGTTGCCCATGCCACAGCTCCCCAAGGGTTTCCGTTGGT
TGCTCCCCAAGCGGCCTCGGGGCGGCGGAAGCAGCCGCGGCGGCGGTGGC
GGCGCTGGTTTCCGGGGGGGGGGATCTGGGAGCAGG
back to top