mRNA_S-ischiensis_contig103.1791.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: D7G2V4_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V4_ECTSI) HSP 1 Score: 107 bits (266), Expect = 2.080e-23 Identity = 55/93 (59.14%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 12 LPMGLRNQGNTCYMNSLLQTLYHVEGLREVVLTEGXXXXXXSTLEGLRDVFAQLRRSGGRPGTTVALTRAMEIDPRFQQDAQEFGRFLFMNIE 290
LP GL NQGNTCY+NSLLQ LYH GLRE V T+ L VF QL + GGRP +T+ +TRAM +DP QQDAQEFGRFLFM +E
Sbjct: 96 LPNGLANQGNTCYLNSLLQALYHAPGLREAVFEALTGGGDSETVLALGTVFRQLEQ-GGRPASTLPVTRAMGVDPTVQQDAQEFGRFLFMALE 187
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: A0A835YMK6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK6_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.750e-19 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 15 PMGLRNQGNTCYMNSLLQTLYHVEGLREVVLTEGXXXXXXSTLEGLRDVFAQLRRSGGRPGTTVALTRAMEIDPRFQQDAQEFGRFLFMNI 287
P+GL NQGNTCYMNSLLQT ++V LR VL+ L GL+ VF LR G G+T LT AM IDPR+QQDAQEFGRFLFM++
Sbjct: 227 PVGLENQGNTCYMNSLLQTAFNVPRLRGAVLSA---PKAGGALGGLQRVFEDLRAGYGA-GSTRPLTAAMGIDPRYQQDAQEFGRFLFMSL 313
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: A0A7S2BF77_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BF77_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.360e-15 Identity = 46/104 (44.23%), Postives = 56/104 (53.85%), Query Frame = 3
Query: 15 PMGLRNQGNTCYMNSLLQTLYHVEGLREVVLTEGXXXXXXSTLEGLRDVFAQLR-RSGGRPGTTVALTRAMEIDPRFQQDAQEFGRFLFMNIEVSAAGPGVPEY 323
P GL N GNTCYMN+LLQ LYHV+ +RE V+ L +F L+ GRP T AL RA+ +D R QQD+QEF LF + A PG Y
Sbjct: 123 PNGLTNHGNTCYMNALLQGLYHVDAVREAVIDAAADSGAGGVPGALAAIFRALKLNENGRPAPTKALCRALGVDVREQQDSQEFRAALFAELTSHPAMPGEALY 226
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: F0Y3L1_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3L1_AURAN) HSP 1 Score: 74.3 bits (181), Expect = 6.400e-12 Identity = 48/105 (45.71%), Postives = 56/105 (53.33%), Query Frame = 3
Query: 21 GLRNQGNTCYMNSLLQTLYHVEGLREVVLTEGXXXXXXSTLEGLRD---------VFAQLRRSGGRPGTTVALTRAMEIDPRFQQDAQEFGRFLFMNI-EVSAAG 305
GLRNQGNTCY+NSLLQTLYHV LR V+ + L LR VFA LR G T ALTR++ + QQDAQE+ R L + E AG
Sbjct: 22 GLRNQGNTCYLNSLLQTLYHVPKLRSAVIDDAPAPAKRGPLARLRPKVPALALARVFATLR--GNSTARTGALTRSLRVSGMQQQDAQEYLRILVGELLEAPVAG 124
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: A0A7S2XW18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW18_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 5.840e-11 Identity = 41/98 (41.84%), Postives = 54/98 (55.10%), Query Frame = 3
Query: 21 GLRNQGNTCYMNSLLQTLYHVEGLREVVL--TEGXXXXXXSTLEGLRDVFAQLR------RSGGRPGTTVALTRAMEIDPRFQQDAQEFGRFLFMNIE 290
GL NQGNTCY+NSLLQ LYH+ R++++ + E L VFA L+ + G +T LT + +DPR QQDAQEF R L +E
Sbjct: 240 GLVNQGNTCYLNSLLQLLYHLPAFRDLLIPGSSRTCVAPGPVGEALGKVFAALKERELQGQEAGGAVSTTPLTSLLGVDPRVQQDAQEFNRLLIAAME 337
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: A0A8J2X4Q1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4Q1_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.730e-9 Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = 3
Query: 21 GLRNQGNTCYMNSLLQTLYHVEGLREVVLTEGXXXXXXSTLEGLR----------DVFAQLRRSGGRPGTTVALTRAMEIDPRFQQDAQEFGRFLFMNIEVSAA 302
GLRNQGNTCY+NSLLQTL+HV LR VL G ++ LR DVF +L ++ T LTRA+ + QQDAQE+ R L + AA
Sbjct: 24 GLRNQGNTCYLNSLLQTLFHVPALRSDVL--GRPAEPRGLMKRLRTAPRPARALADVFKRLAQNA--TAQTRGLTRALGVSGLQQQDAQEYLRLLVGELCEDAA 123
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: A0A1J4K410_9EUKA (Ubiquitinyl hydrolase 1 n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4K410_9EUKA) HSP 1 Score: 65.1 bits (157), Expect = 1.040e-8 Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 3
Query: 18 MGLRNQGNTCYMNSLLQTLYHVEGLREVVL---TEGXXXXXXSTLEGLRDVFAQLRRSGGRPGTTVALTRAM---EIDPRFQQDAQEFGRFLFMNIEVSAAGPGVPEYFCRRRRRRLHGAVFCK 371
+GL NQG TCYMNSLLQ LYH+ R +V T G S L+ +F Q++ + +TVALT++ + Q D +EF R L N+E+ G + + R + + + CK
Sbjct: 684 VGLNNQGATCYMNSLLQALYHLSAFRRLVYEIPTTGSEDSDTSIPLNLQRLFCQMQFCD-KSCSTVALTKSFGWGSAETFMQHDIEEFSRVLIDNLEMKMKGTPLQDAIPRLFKGKFRNYIRCK 806
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: A0A6A4WZ86_AMPAM (Ubiquitin carboxyl-terminal hydrolase 7 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WZ86_AMPAM) HSP 1 Score: 63.5 bits (153), Expect = 1.090e-8 Identity = 46/113 (40.71%), Postives = 57/113 (50.44%), Query Frame = 3
Query: 18 MGLRNQGNTCYMNSLLQTLYHVEGLREVVL---TEGXXXXXXSTLEGLRDVFAQLRRSGGRPGTTVALTRAM---EIDPRFQQDAQEFGRFLFMNIEVSAAGPG----VPEYF 326
MGLRNQG TCY+NSLLQTLY R+ VL TE L L+ VF +L+ S +P T LT + D QQD +EF R L ++V G +PE F
Sbjct: 1 MGLRNQGATCYLNSLLQTLYFTNNFRKAVLKTPTENDDPPKPM-LRALQWVFGELQHSD-KPVGTKKLTESFVWGTTDCSMQQDVEEFLRVLLEKLQVELKGTSMERVIPELF 111
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: A0A7J7KAD0_BUGNE (Ubiquitinyl hydrolase 1 n=2 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KAD0_BUGNE) HSP 1 Score: 64.7 bits (156), Expect = 1.310e-8 Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query: 12 LPMGLRNQGNTCYMNSLLQTLYHVEGLREVVL--TEGXXXXXXSTLEGLRDVFAQLR--RSGGRPGTTVALTRAM---EIDPRFQQDAQEFGRFLFMNIE 290
LP GL N+ NTCY+NSL+Q L+H++ R+++ T S LE L+ +F +L R + TT LT+A I+ QQD EF + LF ++E
Sbjct: 48 LPRGLYNESNTCYLNSLIQVLFHIQAFRQLIFSFTPRQSHKKLSVLESLQWLFLELEEGRDDNKVVTTNRLTKAFGWTSINRGLQQDVHEFMQMLFNSLE 147
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Match: UPI000A30AD65 (ubiquitin carboxyl-terminal hydrolase 7-like n=1 Tax=Mus pahari TaxID=10093 RepID=UPI000A30AD65) HSP 1 Score: 64.7 bits (156), Expect = 1.310e-8 Identity = 48/126 (38.10%), Postives = 65/126 (51.59%), Query Frame = 3
Query: 18 MGLRNQGNTCYMNSLLQTLYHVEGLREVVL---TEGXXXXXXSTLEGLRDVFAQLRRSGGRPGTTVALTRAM---EIDPRFQQDAQEFGRFLFMNIEVSAAGPGVPEYFCRRRRRRLHGAVFCKLL 377
+GL+NQG TCYMNSLLQTL+ R+ V TEGXX S L+ VF +L+ + +P T LT++ +D QQD QE R L N+E G V + R ++ + CK L
Sbjct: 213 VGLKNQGATCYMNSLLQTLFFTNQFRKAVYLMPTEGXXDSSKSIPLALQRVFYELQHNN-KPVGTKKLTKSFGWETLDSFMQQDVQELCRVLLGNVENKMKGTCVEGTIPKLFRGKMVSYIQCKKL 337 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig103.1791.1 >prot_S-ischiensis_contig103.1791.1 ID=prot_S-ischiensis_contig103.1791.1|Name=mRNA_S-ischiensis_contig103.1791.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=140bp MGLRNQGNTCYMNSLLQTLYHVEGLREVVLTEGGGGGGGSTLEGLRDVFAback to top mRNA from alignment at S-ischiensis_contig103:313789..315497- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig103.1791.1 ID=mRNA_S-ischiensis_contig103.1791.1|Name=mRNA_S-ischiensis_contig103.1791.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1709bp|location=Sequence derived from alignment at S-ischiensis_contig103:313789..315497- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig103:313789..315497- >mRNA_S-ischiensis_contig103.1791.1 ID=mRNA_S-ischiensis_contig103.1791.1|Name=mRNA_S-ischiensis_contig103.1791.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=840bp|location=Sequence derived from alignment at S-ischiensis_contig103:313789..315497- (Schizocladia ischiensis KU_0333)back to top |