mRNA_S-ischiensis_contig103.1790.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: D7G2V4_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V4_ECTSI) HSP 1 Score: 200 bits (508), Expect = 1.580e-58 Identity = 102/190 (53.68%), Postives = 132/190 (69.47%), Query Frame = 1
Query: 7 AAEQGGGREEAGENKGVHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDVGKWLQQSAAVLAAGDGQ------------RGENYRLSGVVMHVGGPSVGHYYAYVR 540
AA + GG +E G G+ AI++LF G+L++Y+EC+DV F KE +E FYDL +D++G +L++SLDRF ELLSG+NR RA EHGLQDARKG+RF PPVLQFHLKRFEY+PY L K++DRF FP LD+ W+ + L+ DG + + Y+LS VVMHVGGP+ GHYYAYVR
Sbjct: 200 AAGEAGGDKEVG---GLSAAIKDLFAGRLMSYVECVDVAFTKEKEEAFYDLPMDIKGSGTLQKSLDRFIEAELLSGDNRLRAGEHGLQDARKGIRFLQLPPVLQFHLKRFEYDPYQGDLVKIHDRFEFPTELDMSPWV--TPPPLSPKDGSNSHSDSHTDAEDKADKYKLSAVVMHVGGPAAGHYYAYVR 384
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A835YMK6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK6_9STRA) HSP 1 Score: 191 bits (486), Expect = 5.960e-55 Identity = 87/159 (54.72%), Postives = 113/159 (71.07%), Query Frame = 1
Query: 64 AIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDVGKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
A++ F G L NY++C++VPF++ E FYDLS++V+G ++L+ESLD+FT PE L+G+NRWR + HGLQDARKGVRF SFPP +QFHLKRF Y+ + KVN RF FP TLDV W+ + + NY LS V+MHVGG S GHYYAY+R
Sbjct: 324 AVETTFSGYLENYMDCINVPFSRNRPEPFYDLSVEVEGLRNLKESLDQFTTPEELTGDNRWRTEPHGLQDARKGVRFISFPPFIQFHLKRFRYDMNTGDMGKVNSRFEFPETLDVSPWVSEPGGEACSNPAAAPLNYSLSAVLMHVGGVSSGHYYAYIR 482
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A446U041_TRITD (USP domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446U041_TRITD) HSP 1 Score: 160 bits (406), Expect = 2.360e-45 Identity = 79/166 (47.59%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 55 VHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDV----GKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
V G I++LF G +NYIEC++V + KE FYDL LDV+GC+ + S D++ E L G+N+++A++HGLQDARKGV F FPPVLQ LKRFEY+ D + K+NDR+ FP+ LD+ GK+L A D Y L V++H GG GHYYA++R
Sbjct: 119 VEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYQAEQHGLQDARKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDKDDGKYLTPDA------DRSIRNLYTLHSVLVHSGGVHGGHYYAFIR 278
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A507E5B7_9FUNG (Ubiquitinyl hydrolase 1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E5B7_9FUNG) HSP 1 Score: 168 bits (425), Expect = 7.010e-45 Identity = 80/163 (49.08%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 61 GAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDVGKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVRTGP 549
GAI LFVGK+ +YI C+ VP+ EDFYD+ L+V+GCK+L+ES D + A E L G+NR++A+ +GLQDA+KGV FT+FPPVL LKRFEY+ + D + K+NDR +P +DVG +L + A D + Y L GV++H G GHY A++R GP
Sbjct: 336 GAISRLFVGKMKSYIRCIGVPYESSRMEDFYDIQLNVKGCKTLKESFDEYVAVETLDGDNRYQAEGYGLQDAKKGVIFTAFPPVLHLQLKRFEYDFHRDVMVKINDRHEYPSEIDVGGYLDEEA------DRSVSQKYHLHGVLVHSGDLHGGHYCAFIRPGP 492
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A453FLZ2_AEGTS (USP domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453FLZ2_AEGTS) HSP 1 Score: 158 bits (399), Expect = 7.370e-45 Identity = 78/166 (46.99%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 55 VHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDV----GKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
V G IQ+LF G +NYIEC+ V + KE FYDL+LDV+GC + S D++ A E+L G+N+++++++GLQDA+KG+ F FPPVLQ LKRFEY+ D + K+NDR+ FP+ LD+ GK+L A D Y L V++H GG S GHYYA++R
Sbjct: 25 VEGTIQKLFEGHHMNYIECIGVDYKSTRKESFYDLALDVKGCSDVYASFDKYVAVEMLDGDNKYQSEKYGLQDAKKGMLFIDFPPVLQLQLKRFEYDHARDIMVKINDRYEFPLQLDLDRDDGKYLSPEA------DRSVRNLYTLHSVLVHSGGVSGGHYYAFIR 184
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A059A217_EUCGR (Ubiquitinyl hydrolase 1 n=16 Tax=Magnoliopsida TaxID=3398 RepID=A0A059A217_EUCGR) HSP 1 Score: 166 bits (419), Expect = 4.510e-44 Identity = 82/166 (49.40%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 55 VHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDV----GKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
V G IQ+LF G +NYIEC+DV + KE FYDL LDV+GC+ + S D++ E L G+N+++A+EHGLQDA+KGV F FPPVLQ HLKRFEY+ D + K+NDR+ FP+ LD+ GK+L A D Y L V++H GG GHYYA++R
Sbjct: 406 VEGTIQQLFEGHHMNYIECIDVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYQAEEHGLQDAKKGVLFIDFPPVLQLHLKRFEYDFIRDTMVKINDRYEFPLQLDLDRDNGKYLSPDA------DRSVRNLYSLHSVLVHSGGVHGGHYYAFIR 565
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A4D9BS17_SALSN (Ubiquitinyl hydrolase 1 n=18 Tax=Lamiales TaxID=4143 RepID=A0A4D9BS17_SALSN) HSP 1 Score: 165 bits (418), Expect = 6.140e-44 Identity = 83/166 (50.00%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 55 VHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDV----GKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
V G IQ+LF G L+NYIEC++V F KE FYDL LDV+GCK + S D++ E L G+N++ A+EHGLQDA+KGV F FPPVLQ LKRFEY+ D + K+NDR+ FP+ LD+ GK+L A D Y L V++H GG GHYYA++R
Sbjct: 334 VEGTIQKLFEGHLMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVMFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDNGKYLSPDA------DRSVRNLYTLHSVLVHSGGVHGGHYYAFIR 493
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A822ZU01_NELNU (Uncharacterized protein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A822ZU01_NELNU) HSP 1 Score: 160 bits (406), Expect = 6.590e-44 Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 55 VHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDV----GKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
V G IQ+LF G +NYIEC++V + KE FYDL LDV+GCK + S D++ E L G+N++ A++HGLQDARKGV F FPPVLQ LKRFEY+ D + K+NDR+ FP+ LD+ GK+L A D + Y L V++H GG GHYYA++R
Sbjct: 148 VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRENGKYLSPEA------DRRVCNLYTLHSVLVHSGGVHGGHYYAFMR 307
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A5A7P349_STRAF (Ubiquitinyl hydrolase 1 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7P349_STRAF) HSP 1 Score: 165 bits (417), Expect = 8.310e-44 Identity = 83/166 (50.00%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 55 VHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDV----GKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
V G IQ+LF G +NYIEC++V F KE FYDL LDV+GCK++ ES D++ E L G+N++ A+EHGLQDA+KGV F FPPVLQ LKRFEY+ D + K+NDR+ FP+ LD+ GK+L A D Y L V++H GG GHYYA++R
Sbjct: 349 VEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKNVYESFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFMDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDNGKYLSPEA------DRSIRNLYMLHSVLVHSGGVHGGHYYAFIR 508
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Match: A0A1J6KC76_NICAT (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A1J6KC76_NICAT) HSP 1 Score: 161 bits (407), Expect = 9.560e-44 Identity = 81/166 (48.80%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 55 VHGAIQELFVGKLVNYIECLDVPFAKEWKEDFYDLSLDVQGCKSLEESLDRFTAPELLSGENRWRADEHGLQDARKGVRFTSFPPVLQFHLKRFEYNPYADRLSKVNDRFSFPMTLDV----GKWLQQSAAVLAAGDGQRGENYRLSGVVMHVGGPSVGHYYAYVR 540
V G IQ+LF G +NYIEC++V F KE FYDL LDV+GC+ + S D++ E L G+N++ A+EHGLQDA+KGV F FPPVLQ LKRFEY+ D + K+NDR+ FP+ LD+ GK+L A D Y L V++H GG GHYYA++R
Sbjct: 176 VEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRENGKYLSPDA------DRSVRNLYTLHSVLVHSGGVHGGHYYAFIR 335 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig103.1790.1 >prot_S-ischiensis_contig103.1790.1 ID=prot_S-ischiensis_contig103.1790.1|Name=mRNA_S-ischiensis_contig103.1790.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=184bp AEAAEQGGGREEAGENKGVHGAIQELFVGKLVNYIECLDVPFAKEWKEDFback to top mRNA from alignment at S-ischiensis_contig103:311587..313754- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig103.1790.1 ID=mRNA_S-ischiensis_contig103.1790.1|Name=mRNA_S-ischiensis_contig103.1790.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2168bp|location=Sequence derived from alignment at S-ischiensis_contig103:311587..313754- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig103:311587..313754- >mRNA_S-ischiensis_contig103.1790.1 ID=mRNA_S-ischiensis_contig103.1790.1|Name=mRNA_S-ischiensis_contig103.1790.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1104bp|location=Sequence derived from alignment at S-ischiensis_contig103:311587..313754- (Schizocladia ischiensis KU_0333)back to top |