mRNA_S-ischiensis_contig103.1775.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: D7G353_ECTSI (Putative periplasmic protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G353_ECTSI) HSP 1 Score: 209 bits (533), Expect = 4.810e-52 Identity = 120/282 (42.55%), Postives = 165/282 (58.51%), Query Frame = 2
Query: 1274 RVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQITAAKPQEPWRLGKLAPFLPG---VSSRVAATTTAIQN-LAHLAGAQALARSPLGSGILQLG 2107
RVFVV F+ P ++ M LL + V FL H N TTDEVV+ LE+PGG V ++GL +A LA L+ +G RLTVCVDK AASGGYM+AC+AD + APFA+LGSIGV+ TN ++ L+ +GVD+ T+G K +V+ + Q Q+D IH AFK H+ ++RP +D+E V TG+ WLG+ A+D+ L D+V T EYL R +A + + K + G L L G VS R A++ + L L Q R+ G G+L G
Sbjct: 532 RVFVVSFR---PGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMIACIADELTTAPFAMLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHSAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVDMRLADKVTTAMEYLQGRMTDAQVFLVKPHKKKMAAGSGLLRELLLGPLAVSGRFASSVAVLSTVLRQLLLQQRPGRAARGEGLLHPG 810
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: A0A6H5KTD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD1_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.150e-51 Identity = 117/281 (41.64%), Postives = 164/281 (58.36%), Query Frame = 2
Query: 1274 RVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDE--VVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQITAAKPQEPWRLGKLAPFLPG---VSSRVAATTTAIQN-LAHLAGAQALARSPLGSGIL 2098
RVFVV F+ P ++ M LL + V FL H N TTDE VV+ LE+PGG V ++GL +A LA L+ +G RLTVCVDK AASGGYMMAC+AD + APFA+LGSIGV+ N ++ L+ +GVD+ Q T+G K +V+ + Q Q+D IH AFK H+ ++RP +D+E V TG+ WLG+ A+++ L D+V T EYL R +A + + K + L L G +S R A++ + L L Q R+ G+G+L
Sbjct: 158 RVFVVSFR---PGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEASVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMMACIADELTTAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHTAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVEMHLADKVTTAMEYLQGRMSDAQVFLVKPHKKKMAAGSSLLRELLFGPLAISGRFASSVAVLSTVLRQLLRQQHPCRTARGAGLL 435
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: A0A3M1CHX6_9PROT (Protease SohB n=1 Tax=Bdellovibrio sp. TaxID=28201 RepID=A0A3M1CHX6_9PROT) HSP 1 Score: 194 bits (494), Expect = 2.360e-51 Identity = 102/221 (46.15%), Postives = 146/221 (66.06%), Query Frame = 2
Query: 1274 RVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQI 1936
+++V++FK D + S +SL + ++ A AN+ DEVVLCLE+PGG V YGL +A L ++ GI LTVCVDK AASGGYMMACVAD +C APFA+LGS+GVLA+ N HR L+ VD+ ++TAG K SL +++ K + Q++D H FK+ ++ RP ++VEK+ATG+ W A D+ LVD++ T+ EYL+Q+ EADI ++
Sbjct: 90 KIYVLEFKG-DIKASSVESLGEEVTAILTA-------ANRG-DEVVLCLESPGGVVHGYGLAAAQLLRIKEHGITLTVCVDKVAASGGYMMACVADKVCAAPFAILGSVGVLAQVPNFHRFLKKHDVDYKEVTAGEFKRTVSLFGEITPEGEKKFREQIEDTHALFKEFVKNNRPQVEVEKIATGEYWFAARAKDLALVDELVTSQEYLFQKRNEADIYKV 301
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: UPI001FE45108 (protease SohB n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI001FE45108) HSP 1 Score: 190 bits (483), Expect = 1.130e-49 Identity = 106/225 (47.11%), Postives = 144/225 (64.00%), Query Frame = 2
Query: 1265 RGGRVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQIT 1939
R RVFV+ F + D + + D N+R + AV L A DEVVL LE+PGG V YGL S+ L +R++G+RLTVCVDK AASGGYMMAC+AD I APFA++GSIGV+A+ N HR LR VD +TAG K ++ + + D K Q +L+D H FK+ +++ R LD+ ++ATG+ W G A DIGLVD + T+ EYL R KEAD+ +++
Sbjct: 101 RKARVFVLDF-DGDVQASAVD----NLRREITAV----LEAADKKDEVVLRLESPGGLVHAYGLASSQLRRIRNQGVRLTVCVDKVAASGGYMMACIADRIVAAPFAIVGSIGVVAQIPNFHRLLRKHDVDVELMTAGEYKRTLTMFGENTDKDREKFQEELEDTHLLFKEFVREHRRNLDIAQIATGEHWFGTRAKDIGLVDDLQTSDEYLLTRCKEADVYEVS 316
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: A0A534XJY1_9DELT (Protease SohB n=5 Tax=Bacteria TaxID=2 RepID=A0A534XJY1_9DELT) HSP 1 Score: 188 bits (478), Expect = 2.640e-49 Identity = 107/236 (45.34%), Postives = 148/236 (62.71%), Query Frame = 2
Query: 1277 VFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQITAAKPQE-PWRLGKLA 1981
VFV+ FK D + +R L + V + A K DEVV+ LE+ GG V YGL +A L +R K IRLTVC+D+ AASGGYMMACVAD + APFA++GSIGV+A+ N HR L+ VD ++TAG K S+ +++ K Q +L+D H FK ++ RP LD+++VATG+ WL R L++GLVDQ+ T+ EYL RA EA++ Q+T +P+ RLG +A
Sbjct: 85 VFVLDFK--------GDLFATAVRSLREEVTAITAVAGKG-DEVVVRLESAGGAVPHYGLAAAQLMRVRDKSIRLTVCIDRVAASGGYMMACVADAVVAAPFAIIGSIGVVAQVPNFHRLLKKHDVDFQEMTAGEFKRTVSVFGEITERGRKKFQEELEDTHSLFKQFVKAHRPKLDLDQVATGEHWLARRGLELGLVDQLRTSDEYLIDRAGEANLYQVTFERPRSLRERLGSVA 311
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: A0A4Q7YIP3_9GAMM (Serine protease SohB n=1 Tax=Fluviicoccus keumensis TaxID=1435465 RepID=A0A4Q7YIP3_9GAMM) HSP 1 Score: 189 bits (479), Expect = 3.730e-49 Identity = 99/221 (44.80%), Postives = 140/221 (63.35%), Query Frame = 2
Query: 1274 RVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQI 1936
R+FV+ F D R + D N+R + A+ L + DEVV+CLE+PGG V YGL ++ LA +R + LT+CVDK AASGGYMMAC+ + I APFA++GSIGV+A+ N HR L W +D LTAG K ++ + + + K +L+D H FKD ++ +RP LD+ KVATG+ W GR A+D+GL+D++ T+ EYL +KEADI +
Sbjct: 102 RIFVIHFNG-DMRASATD----NLRQEITAI----LTMAEARDEVVVCLESPGGMVHGYGLAASQLARIRQNNVPLTICVDKVAASGGYMMACLGNTIMAAPFAIVGSIGVVAQIPNFHRLLDKWDIDFEVLTAGEYKRTLTVFGENTDAGREKFVEELEDTHTLFKDFVKDYRPALDIAKVATGEHWYGRRAVDLGLIDKLMTSDEYLQTASKEADIFAV 313
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: A0A7W7P3C9_9PSED (Serine protease SohB n=1 Tax=Pseudomonas nitritireducens TaxID=915472 RepID=A0A7W7P3C9_9PSED) HSP 1 Score: 188 bits (477), Expect = 5.260e-49 Identity = 110/258 (42.64%), Postives = 161/258 (62.40%), Query Frame = 2
Query: 1274 RVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQITAAKPQEPWRLGKL-----APFLPGVSSRVAATTTAI 2032
+VFV+ FK D +A++L + L+ HA K DEV++ L +PGG V YGL +A LA +R KGI LTV VD+ AASGGYMMAC+A+ I APFA+LGSIGV+++ TN+HR L+ VD TAG K ++ +++ K + QL +IH+ F+DH+ +RP LD++K+ TG+ W G A++ GLVDQ+ T+ EYL +A AD+I + P+ P RL KL A F+ G +R+++ ++ I
Sbjct: 93 KVFVLDFKG-DLYASAAENLRHEVTALLS-------HA-KEDDEVLVRLSSPGGTVTGYGLGAAQLARVRDKGIPLTVAVDQVAASGGYMMACIANKIISAPFAMLGSIGVVSQVTNVHRLLKKNDVDVEHFTAGEYKRTVTMTGEITEEGREKYREQLAEIHELFRDHVSAYRPELDMQKIGTGEAWCGTKAMEHGLVDQLMTSDEYLQDKANMADLIHLEFRAPK-PGRLKKLMGAELADFVDGFLTRLSSRSSVI 340
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: UPI000CF45574 (protease SohB n=1 Tax=Microbulbifer pacificus TaxID=407164 RepID=UPI000CF45574) HSP 1 Score: 189 bits (481), Expect = 7.180e-49 Identity = 107/225 (47.56%), Postives = 147/225 (65.33%), Query Frame = 2
Query: 1262 GRGGRVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQI 1936
G R+FVV F + D + A +LS N+R + A+ L + DEVV+CLE+PGG V +YGL ++ LA +R+ G+RLT+ VDK AASGGYMMACVAD I APFA+LGSIGV+A+ N HR L+ VD TAG K ++ + + K Q LD+IH F+ + ++RP LDV KVATG+ W G+ ALD+ LVD++ T+ EYL RA++AD+ Q+
Sbjct: 145 GARKRLFVVHF-DGDIK---ASALS-NLREEITAI----LQVAQPEDEVVVCLESPGGMVANYGLAASQLARVRTAGVRLTIVVDKVAASGGYMMACVADRILAAPFAMLGSIGVVAQLPNFHRLLQRNDVDFELFTAGEYKRTVTMFGENTPEGKEKFQSDLDEIHTLFQHFVSEYRPQLDVTKVATGEVWFGQRALDLALVDELKTSDEYLTSRARDADLYQV 360
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: UPI001E4E281D (protease SohB n=1 Tax=Microbulbifer celer TaxID=435905 RepID=UPI001E4E281D) HSP 1 Score: 189 bits (481), Expect = 7.550e-49 Identity = 100/221 (45.25%), Postives = 143/221 (64.71%), Query Frame = 2
Query: 1274 RVFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQI 1936
R+FVV+F + D + + +L + ++ G + DEVV+CLE+PGG V +YGL ++ LA +RS G++LT+ VDK AASGGYMMACVAD I APFA+LGSIGV+A+ N HR L+ VD TAG K ++ + + K Q L++IH F+ + ++RP LDV KVATG+ W G+ ALD+ LVD++ T+ EYL +AK+AD+ Q+
Sbjct: 151 RLFVVRF-DGDIKASALSNLREEITSILQIAG--------SEDEVVVCLESPGGMVANYGLAASQLARVRSAGVKLTIVVDKVAASGGYMMACVADRILAAPFAMLGSIGVVAQLPNFHRLLQRNDVDFEMFTAGEYKRTVTMFGENTEEGKEKFQSDLEEIHTLFQHFVSEYRPQLDVAKVATGEVWFGQRALDLNLVDEIKTSDEYLTAQAKQADLFQV 362
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Match: A0A2T5J1M3_9GAMM (Inner membrane peptidase n=1 Tax=Agitococcus lubricus TaxID=1077255 RepID=A0A2T5J1M3_9GAMM) HSP 1 Score: 187 bits (476), Expect = 8.180e-49 Identity = 100/220 (45.45%), Postives = 143/220 (65.00%), Query Frame = 2
Query: 1277 VFVVKFKEPDPRRKSADSLSPNMRLLVDAVGFLGLHANKTTDEVVLCLETPGGGVQDYGLMSAHLATLRSKGIRLTVCVDKYAASGGYMMACVADHICVAPFALLGSIGVLAEFTNIHRKLRSWGVDHHQLTAGIDKGGPSLRAKVSTSDLIKLQVQLDDIHQAFKDHIQQFRPGLDVEKVATGQTWLGRAALDIGLVDQVCTTSEYLWQRAKEADIIQI 1936
++V+ F D R + + N+R + A+ + ANK TDEVV+ LE+PGG V YGL ++ LA +R G+ LT+CVDK AASGGYMMAC+A+ I APFA++GSIGV+A+ N HR L W +D+ LTAG K ++ + + + K L+ H FKD +Q +RP LD+ +VATG+ W G+ ALD+GLVD++ T+ EYL+ +KEADI +
Sbjct: 97 IYVINFNG-DIRASATE----NLRQEITAILTI---ANKETDEVVINLESPGGMVHGYGLAASQLARIREHGLPLTICVDKVAASGGYMMACLANTIIAAPFAVVGSIGVVAQLPNFHRLLDKWDIDYEVLTAGEFKRTLTVFGENTEAGRQKFIADLESTHTLFKDFVQSYRPHLDIAQVATGEHWYGKQALDLGLVDRLQTSDEYLFAASKEADIFAV 308 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig103.1775.1 >prot_S-ischiensis_contig103.1775.1 ID=prot_S-ischiensis_contig103.1775.1|Name=mRNA_S-ischiensis_contig103.1775.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=701bp MKRRLLVEKAAVVMKHTALASLAGVVAWKVFWWLLARHPNVLLPMMVFILback to top mRNA from alignment at S-ischiensis_contig103:73935..88857+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig103.1775.1 ID=mRNA_S-ischiensis_contig103.1775.1|Name=mRNA_S-ischiensis_contig103.1775.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=14923bp|location=Sequence derived from alignment at S-ischiensis_contig103:73935..88857+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig103:73935..88857+ >mRNA_S-ischiensis_contig103.1775.1 ID=mRNA_S-ischiensis_contig103.1775.1|Name=mRNA_S-ischiensis_contig103.1775.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4206bp|location=Sequence derived from alignment at S-ischiensis_contig103:73935..88857+ (Schizocladia ischiensis KU_0333)back to top |