mRNA_S-ischiensis_contig103.1772.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig103.1772.1
Unique NamemRNA_S-ischiensis_contig103.1772.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig103contigS-ischiensis_contig103:45134..49219 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTousled-like protein kinase
Ec32 orthologEc-14_000740.2
Exons3
Model size934
Cds size933
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig103.1772.1prot_S-ischiensis_contig103.1772.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig103 45135..49219 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815556.3298795-CDS-S-ischiensis_contig103:45134..456081622815556.3298795-CDS-S-ischiensis_contig103:45134..45608Schizocladia ischiensis KU_0333CDSS-ischiensis_contig103 45135..45608 -
1695739767.6378744-CDS-S-ischiensis_contig103:45134..456081695739767.6378744-CDS-S-ischiensis_contig103:45134..45608Schizocladia ischiensis KU_0333CDSS-ischiensis_contig103 45135..45608 -
1622815556.3412926-CDS-S-ischiensis_contig103:47996..481951622815556.3412926-CDS-S-ischiensis_contig103:47996..48195Schizocladia ischiensis KU_0333CDSS-ischiensis_contig103 47997..48195 -
1695739767.6483133-CDS-S-ischiensis_contig103:47996..481951695739767.6483133-CDS-S-ischiensis_contig103:47996..48195Schizocladia ischiensis KU_0333CDSS-ischiensis_contig103 47997..48195 -
1622815556.3529775-CDS-S-ischiensis_contig103:48959..492191622815556.3529775-CDS-S-ischiensis_contig103:48959..49219Schizocladia ischiensis KU_0333CDSS-ischiensis_contig103 48960..49219 -
1695739767.6564496-CDS-S-ischiensis_contig103:48959..492191695739767.6564496-CDS-S-ischiensis_contig103:48959..49219Schizocladia ischiensis KU_0333CDSS-ischiensis_contig103 48960..49219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig103.1772.1

>prot_S-ischiensis_contig103.1772.1 ID=prot_S-ischiensis_contig103.1772.1|Name=mRNA_S-ischiensis_contig103.1772.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=311bp
LTGLLRARSRGEERFPGVGPADMELAGLEGMDRQDFPPIAGLEENPQVLH
KLSLLEARMTGAAPERSFDGSLPPLDGSRGSSNSSSRSTIGFPKRQQSNI
TTPPPPDGARNHHHSPGHQGPSLSAGHGQGLGQGAVGMQGAVEGEGQRHL
KRKAGEGIAGGADGTDSGPEHLRETTNNASHGASPPASCHLPATPSTLST
LVSVASPGASGGRVTGGLGGGGVGGSGTPPGRAGVGRGGGSGGSAPRHGS
TAYHGGGGPGSSGGRHDGVKRARSSGAQPHLGLTTAAMGDPANCNSSTNH
SPGAGGARPGP
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mRNA from alignment at S-ischiensis_contig103:45134..49219-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig103.1772.1 ID=mRNA_S-ischiensis_contig103.1772.1|Name=mRNA_S-ischiensis_contig103.1772.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4086bp|location=Sequence derived from alignment at S-ischiensis_contig103:45134..49219- (Schizocladia ischiensis KU_0333)
CTCACGGGCCTACTCAGGGCGCGTAGCCGAGGCGAGGAGCGCTTCCCCGG
AGTTGGGCCCGCAGATATGGAGCTGGCGGGCCTGGAGGGGATGGACCGTC
AGGACTTCCCCCCCATCGCCGGGCTGGAGGAAAACCCACAGGTTCTCCAC
AAGTTGTCCCTGCTTGAAGCCCGTATGACTGGGGCGGCCCCGGAGCGGTC
CTTCGACGGGTCTCTACCACCCCTGGACGGGAGCCGGGGCAGCAGTAATA
GTAGCTCTAGGTGAGCGGCATCCAGTGCGTTGACAATCGCTTATGCCTTC
GCGTCGGCTTTTGTGCCCATATCCGTCACCATGTTCAATTGAGCTGTTTC
CTCAGACACACACACACGTTTTGTGTGTGTGGTCGGGCGTATGGAAGCAT
GGTTACCGAGATGTGAATGTAGTGGACGCCCTCCCTTGCCTGCAATGGGT
AGGTGGAGAATTTATTGGTACAATACCGGCTGTACCGTGTGCGAATCTGA
GGCGAAATTGGACACCGCCCGAGATAACTCCCGCACATTTCATCTCGAAC
GGTGTTTCGAATGTCAGAGGGGCGGCCAATTTTGAGCTTGCCGTCAGGAG
CGCCATGGGGGTTGCGCACCGTCCAGCACCGCATGAGAAACCCCCGCCAA
GACTGCCACAAAGCATCACACACACTCTCAGTATATGCTTTGTTTGGCAC
CCCATGGCCATACCCTACACGCCTCCCATGTCCATACCCTACACGCCTCC
CATGTGGCCGGCTATGAAAGGATTTCCGCTCCGCCTTCGGCCATGTCCCC
CTCCCCTGCGAATACGTGTTCTTCGAATCTGGCTGTTCGCTCTCGTACGC
TTTCTGCATGCCCCCGCAAAACAACAGGGGGTGGCACCAGAAGTTAACAC
TGCTCTACCACAGGACAGTAGGGTGGACCTTTCTCTGGGTTCTCTGTGCC
TCAAACTCACGGTCCCCTGACATGTCTCCTGTCCCCCGTCCCCCGCCCCC
GTTGCCCCCACTTCTTGCCGGCAGATCGACGATAGGGTTCCCCAAACGGC
AGCAATCAAACATCACAACGCCTCCCCCACCTGACGGGGCCCGCAACCAC
CATCACTCCCCGGGACATCAGGGCCCATCTCTGTCTGCTGGCCATGGCCA
GGGGTTGGGGCAAGGGGCGGTGGGCATGCAGGGAGCTGTGGAGGGGGAAG
GGCAGAGACACCTCAAGCGCAAGGTGTGTGTCCGTGTGCTAGAGAGAGAG
ACAAAACGAGCTCGTAGCTTTGGTCTGGTGTGACGCCTGCCAATATACTC
TACTCCGTACAGTATTAACAGGAACAACACAGGGTGAGGTGCAGGCCATG
TCACTAAAGACCTCAACAAACAGTGGCACTTCCTCAACTTAGGGTTGCCC
TAACTCTAAGTATTGTCGGAACAACACGGGGCGAGGTACGGGCCATGTCA
CTACGTAGAGACCTGTTAGTTAGTAGGATAGTACAGTAACGACGCTCTGT
ATTTGCACATGTATTAGCTCGCGAGTCAAGGAAGGGAGGGGGCACGGAAA
TGCCGCCCCCTCCGCCCCTGGCGGAAGTGTGCCCCCCCCCCCTCCCACCC
TTGGCTCTGCCGGGTGTGGGGAAGAGGCCCTGGGCCTGGTCCGTGTTTGT
ACAAAGGGATTAGTCGGAAGTCTCGTTGTGCTGGAGACAAGCACAGCATG
AGCACACATATATATATATACTCACGTGGTGCTTGCCGTAGTCCCGAGAC
CATTGACCACGCGCCTCGGACGACACGGAGCAGTGCATATATACTCGAGT
ATATTTTAGTTGAGAACGCCTGGTAGGCCGAGTGAAGCTTAATTCACAAA
GAACTTTGATCAATTGCACGGGTGGGGCACACGTGCAGTAGTACTCGTAC
GTGGGTGTACAGTATACCTACTACTTCGAAGTACATACTCTTTGTTGTAC
TCCACGTGCGCCGCGTGTGCCCGTTCGATACGAAGACCCCCCCGTGGCAC
TCAAGAATGGCCGTCGTATGTACAGTACACAACCGTCAAATTGTACAGTA
TGCTGTGGATGTGCCTGTGCTGCCGCGGTGCTTTGTCAAGCCTATGCACG
CTACTGTACCACCACCTACAGTACAGTACGATTCACCGGCATTTGGCCTC
CCCCGCTAAACTTCTCTTTCCCCCTTCCCTCGTCCCTCCTCCCCCCTCTC
ATGTCCCTCACCTGCCTCCCTCCGTCACCCCCACCCCCTCGCCCTCTCCC
GTCCACTCCTCCCCTGCCTCCGCTCCTCCCTCTCGCTCCTCGCTCCCGCC
CTTTCCTACCTCCGGCTTTCCACCGCCCTGTCCTCCTGTCTCCTCCTGTC
TCCTCCTGCTCCTCCTCCGCCTCCCCCTCCCCTCCCCCTCCCCCCCCTCC
CCCTCCTCCCCCTCCCCCTCCTCCCCGTCCCCTCCTCCTCCTCCTCCCTC
TCCCCCCCCCTCCTCCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCCCCT
CCCCCTCCTCCTCCTCCTCCTCCCCCTCCTCCCCCTCCTCCTCCTCCTCA
CCCTCCTCCTCTTCCCCCTCCTACCCCTCCTCCTCACCCTCCTCCTCCTC
CTCCCCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTTCC
CCTGCTCCCCCTCCTCCCCCTCCTCTCCTCCCCCTCCTCCTCCCCCTCCT
CCCTCTCCTGCCCCTCCTCTCCTCCCCTCCTCCCCCTCCTCCCCCTCCTC
GCCCTCCTCCCCTCCTCCCCTCCTCCCCCTCCTCCCCCTCCTCCCCTCCT
CCCCCTCCTCCCCTCGTCCCCCTCCTCCTCCCCCTCCTCCCCCTCTTCCT
CCTCCTCCCCTCCTCCCCCTCCTCCTCGCCCTCCTCCTCGCCGTCACCCT
CCCCCCTCCTCCCCCCTCCCCCTCCCCCTCCCCCTCGCCCTCCCCCCCCC
CCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCCTCCCCCTCCCCCCCCCC
CCCCCCCCTCCCCCTCCCCCTCCCCCTGCCCTCCCCCCTCCCCCCCTCCC
CCTCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCTCCCCCCC
CCCCCTCCCCCTCCCCCCCCCCCCTCCCCCCCCCTCCCCCCCCCCCCCCC
TCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCTCCCCTCCCCCCCCCCCCCCCCCCCCCCTCCCCTCCCCCTCCCCTCCC
CCTCCCCCTCCCCCTCCCCCTCCTCCCCCTGCTCCTCCTCCCCCTCCTCC
TCCCCCTCCTCCTCCTCCTCCCCCCCCCCTCCTCCTCCTCCTCCCCCTCA
CCCTCCTACTCCGCCTCCGCCTCCCCCTCCCCCTCCCCTCCACCGCCTCC
CCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCGCCCCCGCCCCGC
CCGCCCCGCCCCGCCCCCGCCCCTAACCCCGCCCCACCCCGATCCCCCGC
CCCGCCCCGCCCCCGCCCCTGCCCGCGCCCCGCCCCGCCCCGCCCCGCCC
CCCCCCCCCGCCCCGCCCCCCACCCCCCCCCCCTTTAATCCTCCTCCCCC
TCCTCCTCCAGGCCGGAGAGGGCATCGCTGGCGGCGCCGATGGGACCGAC
TCAGGCCCTGAGCACCTCCGAGAAACCACAAACAACGCCTCCCATGGAGC
ATCACCCCCGGCATCATGCCACCTCCCAGCCACGCCCTCCACCCTCAGCA
CCCTGGTCTCGGTCGCCAGCCCAGGTGCCAGCGGCGGGCGCGTTACTGGC
GGCCTCGGTGGCGGCGGCGTCGGCGGCAGCGGAACTCCCCCTGGCCGTGC
AGGCGTGGGCAGGGGGGGCGGCAGCGGTGGCAGCGCCCCGCGCCATGGCT
CTACCGCCTACCATGGTGGTGGTGGCCCTGGCAGCAGCGGTGGACGCCAC
GACGGCGTAAAACGGGCGCGCTCCTCTGGCGCCCAGCCGCACTTGGGGCT
TACAACCGCCGCCATGGGCGACCCTGCCAATTGCAACAGCAGTACCAATC
ATAGCCCCGGTGCAGGGGGGGCGAGGCCGGGCCCGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig103:45134..49219-

>mRNA_S-ischiensis_contig103.1772.1 ID=mRNA_S-ischiensis_contig103.1772.1|Name=mRNA_S-ischiensis_contig103.1772.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1866bp|location=Sequence derived from alignment at S-ischiensis_contig103:45134..49219- (Schizocladia ischiensis KU_0333)
CTCACGGGCCTACTCAGGGCGCGTAGCCGAGGCGAGGAGCGCTTCCCCGG
AGTTGGGCCCGCAGATATGGAGCTGGCGGGCCTGGAGGGGATGGACCGTC
AGGACTTCCCCCCCATCGCCGGGCTGGAGGAAAACCCACAGGTTCTCCAC
AAGTTGTCCCTGCTTGAAGCCCGTATGACTGGGGCGGCCCCGGAGCGGTC
CTTCGACGGGTCTCTACCACCCCTGGACGGGAGCCGGGGCAGCAGTAATA
GTAGCTCTAGCTCACGGGCCTACTCAGGGCGCGTAGCCGAGGCGAGGAGC
GCTTCCCCGGAGTTGGGCCCGCAGATATGGAGCTGGCGGGCCTGGAGGGG
ATGGACCGTCAGGACTTCCCCCCCATCGCCGGGCTGGAGGAAAACCCACA
GGTTCTCCACAAGTTGTCCCTGCTTGAAGCCCGTATGACTGGGGCGGCCC
CGGAGCGGTCCTTCGACGGGTCTCTACCACCCCTGGACGGGAGCCGGGGC
AGCAGTAATAGTAGCTCTAGATCGACGATAGGGTTCCCCAAACGGCAGCA
ATCAAACATCACAACGCCTCCCCCACCTGACGGGGCCCGCAACCACCATC
ACTCCCCGGGACATCAGGGCCCATCTCTGTCTGCTGGCCATGGCCAGGGG
TTGGGGCAAGGGGCGGTGGGCATGCAGGGAGCTGTGGAGGGGGAAGGGCA
GAGACACCTCAAGCGCAAGATCGACGATAGGGTTCCCCAAACGGCAGCAA
TCAAACATCACAACGCCTCCCCCACCTGACGGGGCCCGCAACCACCATCA
CTCCCCGGGACATCAGGGCCCATCTCTGTCTGCTGGCCATGGCCAGGGGT
TGGGGCAAGGGGCGGTGGGCATGCAGGGAGCTGTGGAGGGGGAAGGGCAG
AGACACCTCAAGCGCAAGGCCGGAGAGGGCATCGCTGGCGGCGCCGATGG
GACCGACTCAGGCCCTGAGCACCTCCGAGAAACCACAAACAACGCCTCCC
ATGGAGCATCACCCCCGGCATCATGCCACCTCCCAGCCACGCCCTCCACC
CTCAGCACCCTGGTCTCGGTCGCCAGCCCAGGTGCCAGCGGCGGGCGCGT
TACTGGCGGCCTCGGTGGCGGCGGCGTCGGCGGCAGCGGAACTCCCCCTG
GCCGTGCAGGCGTGGGCAGGGGGGGCGGCAGCGGTGGCAGCGCCCCGCGC
CATGGCTCTACCGCCTACCATGGTGGTGGTGGCCCTGGCAGCAGCGGTGG
ACGCCACGACGGCGTAAAACGGGCGCGCTCCTCTGGCGCCCAGCCGCACT
TGGGGCTTACAACCGCCGCCATGGGCGACCCTGCCAATTGCAACAGCAGT
ACCAATCATAGCCCCGGTGCAGGGGGGGCGAGGCCGGGCCCGGCCGGAGA
GGGCATCGCTGGCGGCGCCGATGGGACCGACTCAGGCCCTGAGCACCTCC
GAGAAACCACAAACAACGCCTCCCATGGAGCATCACCCCCGGCATCATGC
CACCTCCCAGCCACGCCCTCCACCCTCAGCACCCTGGTCTCGGTCGCCAG
CCCAGGTGCCAGCGGCGGGCGCGTTACTGGCGGCCTCGGTGGCGGCGGCG
TCGGCGGCAGCGGAACTCCCCCTGGCCGTGCAGGCGTGGGCAGGGGGGGC
GGCAGCGGTGGCAGCGCCCCGCGCCATGGCTCTACCGCCTACCATGGTGG
TGGTGGCCCTGGCAGCAGCGGTGGACGCCACGACGGCGTAAAACGGGCGC
GCTCCTCTGGCGCCCAGCCGCACTTGGGGCTTACAACCGCCGCCATGGGC
GACCCTGCCAATTGCAACAGCAGTACCAATCATAGCCCCGGTGCAGGGGG
GGCGAGGCCGGGCCCG
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