mRNA_S-ischiensis_contig102.1737.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: W7TI59_9STRA (Archease domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI59_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.830e-30 Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 1
Query: 175 PRQPTEAN-LRAVRAAVAARTGMARCEEGHSPGKGSAADGEYFEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDRGL 570
P++P + + ++ V AAV R R E G G A GE++EYLDHTADVQLH+WG+ L A E++V CM NYMTD++ V VD T+ EV+GHDL SLLFA+LDEFLF F +E K+A +L R L
Sbjct: 50 PQKPLDTSQMQQVTAAVRRRAAEHRPERGEDMGNDGVA-GEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPL 181
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A4D9DB22_9STRA (Archease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB22_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.970e-30 Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 199 LRAVRAAVAARTGMARCEEGHSPGKGSAADGEYFEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDR 564
++ V AAV R R E G G A GE++EYLDHTADVQLH+WG+ L A E++V CM NYMTD++ V VD T+ EV+GHDL SLLFA+LDEFLF F +E K A +L R
Sbjct: 1 MQQVTAAVRRRAAEHRPERGEDMGNDGVA-GEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKAAKILEFVR 121
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A2P6TT68_CHLSO (Archease-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT68_CHLSO) HSP 1 Score: 114 bits (285), Expect = 1.080e-27 Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 271 KGSAADGEYFEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDR 564
+ +A +G+ FEYLDHTADVQLH+WGETL A E++ LCMFNYMT + + +D LTR E +GHDL+SLLF FLDE LF F E K+ + DR
Sbjct: 115 RSAAVNGQKFEYLDHTADVQLHAWGETLREAFENVGLCMFNYMTPLKGIGIDPALTRTYEAEGHDLQSLLFNFLDELLFAFATEFFVAKQLRITRFDR 212
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: F0ZBE0_DICPU (Archease domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZBE0_DICPU) HSP 1 Score: 106 bits (265), Expect = 6.980e-26 Identity = 48/90 (53.33%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 298 FEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLT-RVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDR 564
FEYLDHTAD+ H+WG++LE ALE +VL M NYM ++ TV++D+ T + + V+GHD+ SLLFA LDEFLF+F+ E + K+ T+ S+D+
Sbjct: 15 FEYLDHTADIMFHTWGDSLEEALEQVVLTMMNYMVELETVELDDTATEQTISVQGHDMDSLLFALLDEFLFVFNTEFIIFKQVTIKSIDK 104
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A7S0LV34_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LV34_9CRYP) HSP 1 Score: 110 bits (276), Expect = 8.320e-26 Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 298 FEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQ-VDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDR 564
+EYLDHTADVQ H+WG TL A E MV+CMF+YMTDI TV+ + E LT VEV GHD++SLL+A +DEFL+ F EG ++ TV+SLDR
Sbjct: 189 YEYLDHTADVQFHAWGATLAEAFEQMVVCMFSYMTDIETVEELGEPLT--VEVSGHDMQSLLYALMDEFLYQFCVEGFVARRVTVVSLDR 276
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A2P6V9A2_9CHLO (Archease-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V9A2_9CHLO) HSP 1 Score: 108 bits (271), Expect = 1.930e-25 Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 271 KGSAADGEYFEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDRGLGGRRGKE 591
+ +A G FEYLDHTADVQLH+WG+TL A E+ L MFNYMT + + D LTR E +GHDL+SLLF FLDE LF F E K+ + DRG ++G+E
Sbjct: 111 RSAAVRGHKFEYLDHTADVQLHAWGQTLTEAFENCALAMFNYMTPLKGIGADPALTRRYEAEGHDLQSLLFNFLDELLFAFATEFFVAKQLRITRFDRGDVAQQGEE 217
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A7S4FB80_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FB80_CHRCT) HSP 1 Score: 108 bits (270), Expect = 3.940e-25 Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 298 FEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDR 564
+EYL+HTADVQLH+WG++LE A E MVLC+ +TD+ TV VD TR V +GHDL SLL+ FLDE+LF FH++ ++ VLSLDR
Sbjct: 165 YEYLEHTADVQLHAWGDSLERAFEQMVLCVMGVLTDLHTVDVDGAQTREVNAEGHDLHSLLYNFLDEWLFQFHSDLFVCRRVRVLSLDR 253
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A8K1C5I9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5I9_PYTOL) HSP 1 Score: 104 bits (259), Expect = 5.080e-25 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 259 HSPGKGSAADGEYFEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLD 561
+SP + FEYLDHTAD+QLH+WG TL A +V+CMF+Y+TDI TV +D + V V GHDL+SLLFAF+DEFLF F A+ + K L +D
Sbjct: 25 NSPSVKAPVTSHPFEYLDHTADIQLHAWGSTLGDAFRSVVMCMFHYITDIETVAIDPLQSIEVTVAGHDLESLLFAFMDEFLFRFAADRIVCKDIEFLHVD 125
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A7S3FRP0_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FRP0_9CHLO) HSP 1 Score: 106 bits (264), Expect = 6.860e-25 Identity = 58/116 (50.00%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 217 AVAARTGMARCEEGHSPGKGSAADGEYFEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDR 564
A AA TG E S A G+ FEYLDHTADVQ H+WG L A ++ L M+NYMT I + VDE L+R E +GHDL+SLLF F+DE LF+FH E ++ V LDR
Sbjct: 70 ATAAGTGAEALPEYRS----QAIKGQKFEYLDHTADVQCHAWGADLPEAFANVGLAMYNYMTPIKGITVDESLSRSFEAEGHDLQSLLFNFMDELLFVFHTEFFVARRLRVTKLDR 181
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Match: A0A8J9WRV1_9CHLO (Protein archease n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRV1_9CHLO) HSP 1 Score: 105 bits (261), Expect = 8.720e-25 Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 277 SAADGEY-FEYLDHTADVQLHSWGETLEAALEHMVLCMFNYMTDIATVQVDERLTRVVEVKGHDLKSLLFAFLDEFLFLFHAEGLTVKKATVLSLDRGL 570
SAA+G + FEYLDHTAD+Q+H+WG TLE A L M+NYMT ++ V +D TR +V+GHD +SLL+ FLDE LF+F E L ++ V+ LDR L
Sbjct: 52 SAAEGNFQFEYLDHTADIQIHAWGHTLEEAFASAGLGMYNYMTPLSDVAIDPACTRTFDVEGHDEQSLLYNFLDELLFVFGTEMLVCREINVVKLDRAL 150 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig102.1737.1 >prot_S-ischiensis_contig102.1737.1 ID=prot_S-ischiensis_contig102.1737.1|Name=mRNA_S-ischiensis_contig102.1737.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=198bp AAAGTTGGGDEGRENQAPPPPGATAGDVSRGTGDVIALETGPGEAAAGAAback to top mRNA from alignment at S-ischiensis_contig102:63119..66666+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig102.1737.1 ID=mRNA_S-ischiensis_contig102.1737.1|Name=mRNA_S-ischiensis_contig102.1737.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3548bp|location=Sequence derived from alignment at S-ischiensis_contig102:63119..66666+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig102:63119..66666+ >mRNA_S-ischiensis_contig102.1737.1 ID=mRNA_S-ischiensis_contig102.1737.1|Name=mRNA_S-ischiensis_contig102.1737.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1188bp|location=Sequence derived from alignment at S-ischiensis_contig102:63119..66666+ (Schizocladia ischiensis KU_0333)back to top |