mRNA_S-ischiensis_contig101.1702.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: D7G5K8_ECTSI (Scaper protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K8_ECTSI) HSP 1 Score: 117 bits (292), Expect = 7.350e-28 Identity = 56/66 (84.85%), Postives = 58/66 (87.88%), Query Frame = 1
Query: 31 QRLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFEEEQRAAR 228
QRLW YLF NVNRAVDELYYLCEAEGS HC AAELL+GCGRDFT LV+RIADQ RFEEEQRAAR
Sbjct: 36 QRLWGYLFRNVNRAVDELYYLCEAEGSATHCTEAAELLEGCGRDFTKLVERIADQKRFEEEQRAAR 101
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: A0A7S2WB00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB00_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 9.380e-21 Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1
Query: 28 QQRLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFEE 210
QQRLW+YLF NVNRAVDELYYLCEAEGSTEHC AA+LL+ C RDF L++R Q +FEE
Sbjct: 104 QQRLWSYLFRNVNRAVDELYYLCEAEGSTEHCEEAAKLLESCSRDFHKLIERTEAQKKFEE 164
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: A0A1Y1HSX8_KLENI (SCAPER_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSX8_KLENI) HSP 1 Score: 70.5 bits (171), Expect = 1.490e-11 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 28 QQRLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFEEEQRAARG 231
++RLW+YLF N+ R++DELY+LCE E H A ++L G DF L R+ Q RFE E+RA RG
Sbjct: 1364 KERLWSYLFDNLGRSIDELYFLCELECDEAHMREAMQVLGEAGDDFRELKARVEKQDRFERERRATRG 1431
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: A0A7S2WE05_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WE05_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.190e-8 Identity = 30/57 (52.63%), Postives = 35/57 (61.40%), Query Frame = 1
Query: 34 RLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRF 204
++W LF NVNR +DELYY+CE + S E CA A ELL DF L QRI Q F
Sbjct: 180 KIWNILFRNVNRTIDELYYMCEFDSSEEQCAKAEELLGTYLSDFRELKQRIQTQDEF 236
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: UPI0003F0934F (S phase cyclin A-associated protein in the endoplasmic reticulum-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0934F) HSP 1 Score: 60.1 bits (144), Expect = 6.260e-8 Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 34 RLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFE 207
R WA+LF N+ RAVDE+Y CE + S C +L C RDF L++RI Q+ FE
Sbjct: 150 RYWAFLFDNLERAVDEIYQTCEVDESIVECKEVIMMLTNCTRDFDSLIERIRLQTAFE 207
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: UPI00142575A7 (S phase cyclin A-associated protein in the endoplasmic reticulum-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142575A7) HSP 1 Score: 59.3 bits (142), Expect = 1.160e-7 Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 34 RLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFE 207
R WA+LF N+ RAVDE+Y+ CE + S C +LK RDF L++RI Q+ FE
Sbjct: 129 RYWAFLFDNLQRAVDEVYHTCEVDESIVECKEVIMILKSATRDFEALIKRINVQTAFE 186
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: A0A7I4ADC6_PHYPA (SCAPER_N domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ADC6_PHYPA) HSP 1 Score: 58.5 bits (140), Expect = 2.190e-7 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1
Query: 28 QQRLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRI 186
+QRLW YLF N+NRA+DELY+LCE E E A +L G DF L R+
Sbjct: 506 RQRLWCYLFENMNRAIDELYFLCELESDVEQIKEALLVLDEAGLDFKDLKARV 558
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: B3S8D2_TRIAD (C2H2-type domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S8D2_TRIAD) HSP 1 Score: 58.2 bits (139), Expect = 2.900e-7 Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 34 RLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFE 207
R W+YLF N+NRAVDE+Y +CE + + C L C +DF LV+RI Q+ FE
Sbjct: 49 RYWSYLFDNLNRAVDEIYCVCENDENINGCQEVIMTLDICKKDFNALVERIHLQTEFE 106
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: UPI001455D7A0 (S phase cyclin A-associated protein in the endoplasmic reticulum-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455D7A0) HSP 1 Score: 57.8 bits (138), Expect = 4.030e-7 Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 34 RLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFE 207
R WA+LF N+ RAVDE+Y CEA+ S C +LK DF L++RI Q+ FE
Sbjct: 202 RYWAFLFDNLQRAVDEIYQTCEADESIVECKEVIMILKRATHDFESLIKRINVQTEFE 259
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Match: A0A7M7N753_STRPU (SCAPER_N domain-containing protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7N753_STRPU) HSP 1 Score: 57.0 bits (136), Expect = 7.480e-7 Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 1
Query: 34 RLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGCGRDFTMLVQRIADQSRFE 207
R WA+LF N+ RAVDE+Y CE + S C +LK +DF L++RI Q FE
Sbjct: 156 RYWAFLFDNLQRAVDEIYQTCEVDESIMECKEVIMILKSATQDFESLIKRITVQKDFE 213 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig101.1702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig101.1702.1 >prot_S-ischiensis_contig101.1702.1 ID=prot_S-ischiensis_contig101.1702.1|Name=mRNA_S-ischiensis_contig101.1702.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=129bp VFTSGSHYHQQRLWAYLFSNVNRAVDELYYLCEAEGSTEHCAVAAELLKGback to top mRNA from alignment at S-ischiensis_contig101:80577..86191- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig101.1702.1 ID=mRNA_S-ischiensis_contig101.1702.1|Name=mRNA_S-ischiensis_contig101.1702.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5615bp|location=Sequence derived from alignment at S-ischiensis_contig101:80577..86191- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig101:80577..86191- >mRNA_S-ischiensis_contig101.1702.1 ID=mRNA_S-ischiensis_contig101.1702.1|Name=mRNA_S-ischiensis_contig101.1702.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=774bp|location=Sequence derived from alignment at S-ischiensis_contig101:80577..86191- (Schizocladia ischiensis KU_0333)back to top |