mRNA_S-ischiensis_contig101.1692.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A182GKV7_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GKV7_AEDAL) HSP 1 Score: 123 bits (308), Expect = 1.050e-29 Identity = 72/200 (36.00%), Postives = 113/200 (56.50%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGV----DLSARRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMA 588
DLG +Q LG+R+T + I LDQ+ Y + ++ E G D ++P D ++S + DE E + P+ ++G L F+ +RPD+A +V + ++P HW + +LRYL GT D+ + Y+ S ++ GYSD+DWGND ETR SVTGY+ + G ++AW ++Q V LS+ EAE+ A+A
Sbjct: 3 DLGYAEQILGMRVTQVDGRITLDQEKYIEQLL-ERFGMNDCNPVSTPFDASQKLSKEMSPKSSDEVERMANV-PFRELVGGLQFVAQCTRPDIAFAVNAVSSYNSNPGEAHWMAAKRILRYLKGTKDMKL---VYS----SESEESFHGYSDADWGNDPETRRSVTGYVFKHSGGAVAWSCRRQPTVALSTTEAEYMAIA 193
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A6A3ZTI4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZTI4_9STRA) HSP 1 Score: 122 bits (306), Expect = 9.070e-29 Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSA-RRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMAQGMRHCIS 612
D G Q LGV + I + Q Y + I+ E G D +P++ V L+ +D + E +PY +G LM+L +RPDLA ++ ++ R A+P +H ++ VLRYLAGT++ I YA D D+ VL GYSDSDW ND E R S TG++ G +IAW S++Q + LS+AEAE A + ++
Sbjct: 84 DQGRLTQYLGVEVEQTSESIKISQGKYAREIL-EKFGYQDAHAVGNPMETNVRLAPLEKDVKSETS---FPYREAIGMLMYLATSTRPDLAFTLGQISRFVANPSAKHVGAVKGVLRYLAGTVNYGI---TYARKQDEVDEVVLEGYSDSDWANDPEQRKSTTGFVFSLAGGAIAWMSRRQSIIALSTAEAESVAACEASMEAMA 281
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A182GNA3_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GNA3_AEDAL) HSP 1 Score: 122 bits (305), Expect = 2.360e-28 Identity = 71/199 (35.68%), Postives = 110/199 (55.28%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSARRDDEDELDCKLY---PYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMA 588
DLG +Q LG+R+T + I LDQ+ Y + ++ E G D ++P D LS + D + P+ ++G L F+ +RPD+A +V + ++P HW + +LRYL GT D+ + Y+ S ++ GYSD+DWGND ETR SVTGY+ + G ++AW ++Q V LS+ EAE+ A+A
Sbjct: 128 DLGYAEQILGMRVTQVDGRITLDQEKYIEQLL-ERFGMNDCNPVSTPFDASQKLSKEMSPKSPDDVERMANVPFRELVGGLQFVAQCTRPDIAFAVNAVSSFNSNPGEAHWTAAKRILRYLKGTKDMKL---IYS----SESEESFHGYSDADWGNDPETRRSVTGYVFKHSGGAVAWSCRRQPTVALSTTEAEYMAIA 318
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A1Y1KL90_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1KL90_PHOPY) HSP 1 Score: 124 bits (311), Expect = 2.370e-28 Identity = 73/203 (35.96%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSARRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMAQGMRHCI 609
+LG Q LG+RI DE I +DQ+ Y +I+ + LD + +PL+ G+ LS +D ++ PY ++G LM++ M+RPD+A +V L + HW+ + VLRYL GT H + +SN L+G++D+DWG+D + R S TGY+ G SIAW+S +Q V LS+ EAE+ A+++ + I
Sbjct: 464 NLGEARQCLGIRIVRDENCITIDQESYIVAIL-KRFNMLDCKSVCTPLENGIKLSKVKDHTCDVSL---PYKELIGSLMYVAVMTRPDIAFAVSLLSQYNNCYTKIHWQNAKRVLRYLNGTK----HYSMKFTKDESN----LVGFADADWGSDEKDRKSYTGYVFKLSGGSIAWKSCKQKTVALSTTEAEYVALSEATKEAI 654
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A6A3HC77_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HC77_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.450e-28 Identity = 69/194 (35.57%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSARRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTA 582
D G+ ++ LGV+I E+GI++ Q Y K ++ + G + + SP++ V + E D + Y +G LM+L +RPD+A V L R ++P +H ++ +LRYLA T I Y+ + D DQ ++ G+SD+DWGND ETR SVTG+++ G ++AW +++Q V S+AEAE+ A
Sbjct: 134 DGGLANKFLGVQIEQSESGILIHQDQYCKEVL-DRFGYGEAHGSASPMETNVKFKPNEESEKNEDIS-FDYRAAIGSLMYLTTSTRPDIAFPVGYLSRFVSNPSKKHGGAVKRILRYLAATSRQGIK---YSNDKDVTDQILVSGHSDADWGNDPETRKSVTGFVMTIAGGAVAWAARRQTIVAQSTAEAEYVA 322
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A2N9F2G9_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F2G9_FAGSY) HSP 1 Score: 116 bits (291), Expect = 6.130e-28 Identity = 70/209 (33.49%), Postives = 115/209 (55.02%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIIL--DQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSA----RRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMAQGMRHCI 609
D+G D LGV+I D IL QQ Y K ++ E D + +P+ + LS + DE E ++ PYAN +G LM+++ +RPD+ +V + R ++P + HW+ ++ +LRYL GT+D Y +D + LIGYSD+DWG+D++ R S +GY + +I W SK+Q + LS+ EA++ A + ++ +
Sbjct: 17 DMGEADYILGVKIFRDRLKKILGLSQQTYIKKVL-ERFEMSDCKPIDTPISKNESLSKNMCPKTQDEQEKMARV-PYANAIGSLMYVMMCTRPDICYAVGLVSRFQSNPELAHWKAVKRILRYLKGTID-------YVLCYQGSDLR-LIGYSDADWGSDLDERKSTSGYAFFLNNGAIIWSSKKQPCIALSTMEAKYVACSAAIQEAV 215
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A383VEJ4_TETOB (Integrase catalytic domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VEJ4_TETOB) HSP 1 Score: 123 bits (308), Expect = 7.760e-28 Identity = 74/205 (36.10%), Postives = 112/205 (54.63%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTE-GMGSLDLRITTSPLDRGVDLSARRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAAN-TDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMAQGMRHCI 609
DLG + LG+ IT TGI L Q+ +V + GM + + R+ P+ G L+ + +D + LD YPYA ++G L++L +RPD+A V L R A+P M HW + VLRYLAGT + Y N + + LIGY+DSD+ D +TR S G+ + ++I W+SK+Q V S+ EAE+ A ++ +
Sbjct: 1066 DLGAAELFLGISITRQPTGIKLAQERMINDLVAKYGMENSNGRLL--PMSPGTKLT-KDEDSEPLDTSKYPYATLVGALLYLANCTRPDIAYPVGVLARFMANPGMSHWHAAKGVLRYLAGT-------STYGLNYSKAGSSSTLIGYTDSDFAGDADTRRSTAGFTFIKGNAAICWQSKRQPTVATSTTEAEYMGAATSVKEAL 1260
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A6A3X4P1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X4P1_9STRA) HSP 1 Score: 121 bits (303), Expect = 9.360e-28 Identity = 72/204 (35.29%), Postives = 110/204 (53.92%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSARRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMAQGMRHCIS 612
D G+ Q LGV + I + Q Y + I+ + G +P++ V L+ DEDE +PY +G LM+L +RPDLA + +L R A+P +H + VLRYLAGTL+ I +Y + + VL G+SDSDW ND E R S TG++ G ++AW S++Q +TLS+AEAE+ ++ + ++
Sbjct: 222 DQGLLSQYLGVEVKQTPRAITISQSKYAREIL-QKFGYSKAHAVGNPMEVNVWLAPL--DEDEPTDSSFPYREAIGMLMYLATSTRPDLAFGLGQLRRFVANPSKKHVGTSKRVLRYLAGTLEYGI---SYLRQQGNAYEVVLEGFSDSDWANDPEQRKSTTGFVFTLAGGAVAWMSRRQSIITLSTAEAEYVSVCEATMEAVA 419
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A060SVL2_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SVL2_PYCCI) HSP 1 Score: 120 bits (301), Expect = 1.220e-27 Identity = 76/208 (36.54%), Postives = 106/208 (50.96%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSARRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSN-----DQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAMAQGMRHCI 609
DLG P LG+ +T D + I + Q + +S + E G D +P+D V L DD D D K PY +G LM+ +RPD++ +V+ L + ++ P HW ++ V RYL GTLD I Y + D L GYSD+DWG + R S++GY L IAW SK+Q V LSS EAE+ A++ R I
Sbjct: 135 DLGTPRLLLGLELTRDGSSITIRQTHFIRSTL-ERFGMADCAPVNTPMDPNVRLLKEPDDADLSDMKDIPYQAAIGTLMYAALGTRPDISYAVQALSQFSSRPGPAHWTAVKRVFRYLKGTLDYGI---TYRRKGEQQPRAYYDHFRLEGYSDADWGANPVDRMSISGYAFLIGSGVIAWSSKKQAVVALSSTEAEYMAISYAARQAI 338
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Match: A0A5A7SZD1_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7SZD1_CUCME) HSP 1 Score: 116 bits (291), Expect = 2.760e-27 Identity = 67/195 (34.36%), Postives = 104/195 (53.33%), Query Frame = 1
Query: 1 DLGVPDQQLGVRITTDETGIILDQQLYTKSIVTEGMGSLDLRITTSPLDRGVDLSARRDDEDELDCKLYPYANILGKLMFLVGMSRPDLASSVRELGRRAASPCMRHWRGLQHVLRYLAGTLDVCIHDAAYAANTDSNDQQVLIGYSDSDWGNDIETRPSVTGYILLYDGSSIAWRSKQQGAVTLSSAEAEWTAM 585
DLG D LGV+I ++T + L Q Y + I+ + S D+ +P D L + D YA I+G +M+L+ +RPD+A +V L R +P HW L+H+LRYL GT+D C+H + A VL GY D++W D + S +GY+ L G +I+W+S +Q + S+ E+E+ A+
Sbjct: 3 DLGEADVILGVKIRKNKTSLSLCQSHYVEKILKK-FDSFDVSPVRTPFDASKHLKKNKGDSVSQP----EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPA--------VLEGYCDANWVTDNDEVNSTSGYVFLLGGEAISWKSTKQTCIARSTMESEFIAL 184 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig101.1692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig101.1692.1 >prot_S-ischiensis_contig101.1692.1 ID=prot_S-ischiensis_contig101.1692.1|Name=mRNA_S-ischiensis_contig101.1692.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=177bp MGSLDLRITTSPLDRGVDLSARRDDEDELDCKLYPYANILGKLMFLVGMSback to top mRNA from alignment at S-ischiensis_contig101:35086..35935+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig101.1692.1 ID=mRNA_S-ischiensis_contig101.1692.1|Name=mRNA_S-ischiensis_contig101.1692.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=850bp|location=Sequence derived from alignment at S-ischiensis_contig101:35086..35935+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig101:35086..35935+ >mRNA_S-ischiensis_contig101.1692.1 ID=mRNA_S-ischiensis_contig101.1692.1|Name=mRNA_S-ischiensis_contig101.1692.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1062bp|location=Sequence derived from alignment at S-ischiensis_contig101:35086..35935+ (Schizocladia ischiensis KU_0333)back to top |