Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 253 |
| Cds size | 249 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815545.5343482-CDS-S-ischiensis_contig100:322139..322194 | 1622815545.5343482-CDS-S-ischiensis_contig100:322139..322194 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 322140..322194 + |
| 1695739760.8607936-CDS-S-ischiensis_contig100:322139..322194 | 1695739760.8607936-CDS-S-ischiensis_contig100:322139..322194 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 322140..322194 + |
| 1622815545.5465724-CDS-S-ischiensis_contig100:323772..323966 | 1622815545.5465724-CDS-S-ischiensis_contig100:323772..323966 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 323773..323966 + |
| 1695739760.871304-CDS-S-ischiensis_contig100:323772..323966 | 1695739760.871304-CDS-S-ischiensis_contig100:323772..323966 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 323773..323966 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig100.1687.1 >prot_S-ischiensis_contig100.1687.1 ID=prot_S-ischiensis_contig100.1687.1|Name=mRNA_S-ischiensis_contig100.1687.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=83bp
ELQRQKTSLLARQQPAALGDLEAQIAELRLESAEQISELRWIKDDMTKSK
TVKVSEMTTARKCHAWMAHMGLEIKVFEGSATQ back to topmRNA from alignment at S-ischiensis_contig100:322140..323968+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig100.1687.1 ID=mRNA_S-ischiensis_contig100.1687.1|Name=mRNA_S-ischiensis_contig100.1687.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1829bp|location=Sequence derived from alignment at S-ischiensis_contig100:322140..323968+ (Schizocladia ischiensis KU_0333)
GAGCTACAGAGGCAGAAGACGTCTCTCTTGGCCCGACAGCAGCCCGCTGC
CCTAGGTGCGACCCTAAAAGAACCACGAAGAACCAGGAAGAACCAAAAAG
GACCACCAACCGAATTGACCCGACCGCGACCACGCGAGCTTACGGCCCCC
GTTCCATCAGTATCTTCGTTCCTGCCGTCGACCAATGGCCTTAAAGCCAT
CGTGAGCACCTTGTCCCCAGCGTGAAGGGCTCTCTGTTCCCGCGGGGTCA
TGGCTGCTTGTTTCGCGTGTGCTGCACCCTGCTGGCTTACGAAGGCCCAT
GCTCTCCGTCGATCAAGGCATGTGAATGGCGCTTCCTCCATCGTCCCCAC
CTCCGGTGTGAATGCGCCATCTGGTTTCTACTTTTTCATGGGCCAAATTG
AGGTTCTTCTTGGGGCACGCACACACCACATGCTGTTTGCCTCCAATTTC
TTGTGACATCTGTGGGCCACTCCCCCGCAACGCTTTGACTGTCGTTCTAT
CCTGGGCGCATATTTTTGTGGTCTGGCCCATTTGCGAAATGTTGTATGTG
TGCTTGTGCTCACGAGCAACTTCTGAGCTACACAACTGACTGCCGCGCCC
AGGGCTATGCGCACTGTTGCTGATTTGCCGTGAGCCACAATTTCTGCTTT
TTGTGTACCTCAGAGATTTGGTTTCCCTGCTCTGCCCTTGGTGGCCACAT
GTCAAGGTGAGTGTAGTGCCCTGCACCCTGTACTCTTTGCTTGTGTTGTT
GCCGCGTTGAACGTCGTTGGTTGATGCCTTTGTTTGTGTGAATGTTGCCA
TTAAGAACCAGTCAAGAGTAAATTGTCATTCATGTACAAGGCACACCAGC
AAGTACAGGTACTGCTGTACAAGCACATCCAAAACTGAAAGACAGTAGAT
ACCCCTATGACACACTGACTACCTAGTGTACATACACCTACAGAGCTTGC
CGTAGACCAGAGAGCATTGGCCATGCAGCTTGTTCCAGGTGAAGCAGCTG
TGATTTGTCCAAGTTTGATTGTGCAGCAATTGTACATGACATCCCCGCAC
AAAAATGCTGTAGTGCAGTACTACATACACATTGTGGCCCGGGAGTGCGC
TTGTCGCAAGACCCCACCTGGACATTGTGGGTGCCCCTTGAGTGCACCAG
GGTGATGCGCCCGTGCACTAACATAGTAATCCACCCCCCCTGTCCCTGGG
TGCCCCACCGTTGCCTGCCTCTGTGCTTGCATGCTGCGCTCGCTGCGATC
CTCCTTGCTCCACGGGGTGCCGTCCTCTCAACTGCTGCATGACGCAGGTG
TGTTGCGCGTTTACAGCGTTTTTGTTTTTCGTGGTTCGCCATCTGTACGA
TCTGTGTTGAGGTCTGCCCTCATTGCGCGTTACATGCACCAGTCCTGAGC
ACTTTTCCGTGGCTCCTGTGCAAGTACAGCAGTACCTGTGTATGACGTAC
CACCCAATAATACTACGGCAAGTACATGGGCAAGACTACAGAGATCATGC
TTTTCGTTTCAGTCGTTTTCCGTGCAACCTTGACCCTTCATGTGGTCGCC
GCACAATTTGTCAGGCATGTCGTAGGTTTGCTGACTGCCTGTTTGTGTGC
CAAAGCAGTTCTTGTGGTGCTGCCTGAATGCAGGTGACTTGGAGGCGCAG
ATTGCAGAGCTCCGCTTGGAGTCTGCCGAACAGATTTCAGAGCTCCGCTG
GATCAAGGACGACATGACGAAGTCCAAGACCGTCAAAGTGTCTGAGATGA
CAACGGCAAGGAAGTGCCATGCCTGGATGGCACACATGGGCCTGGAGATC
AAAGTGTTCGAAGGGTCTGCTACGCAAGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig100:322140..323968+ >mRNA_S-ischiensis_contig100.1687.1 ID=mRNA_S-ischiensis_contig100.1687.1|Name=mRNA_S-ischiensis_contig100.1687.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=498bp|location=Sequence derived from alignment at S-ischiensis_contig100:322140..323968+ (Schizocladia ischiensis KU_0333)
GAGCTACAGAGGCAGAAGACGTCTCTCTTGGCCCGACAGCAGCCCGCTGC
CCTAGGAGCTACAGAGGCAGAAGACGTCTCTCTTGGCCCGACAGCAGCCC
GCTGCCCTAGGTGACTTGGAGGCGCAGATTGCAGAGCTCCGCTTGGAGTC
TGCCGAACAGATTTCAGAGCTCCGCTGGATCAAGGACGACATGACGAAGT
CCAAGACCGTCAAAGTGTCTGAGATGACAACGGCAAGGAAGTGCCATGCC
TGGATGGCACACATGGGCCTGGAGATCAAAGTGTTCGAAGGGTCTGCTAC
GCAAGTGACTTGGAGGCGCAGATTGCAGAGCTCCGCTTGGAGTCTGCCGA
ACAGATTTCAGAGCTCCGCTGGATCAAGGACGACATGACGAAGTCCAAGA
CCGTCAAAGTGTCTGAGATGACAACGGCAAGGAAGTGCCATGCCTGGATG
GCACACATGGGCCTGGAGATCAAAGTGTTCGAAGGGTCTGCTACGCAA back to top
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