mRNA_S-ischiensis_contig100.1681.1 (mRNA) Schizocladia ischiensis KU_0333
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A7S1G9A9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9A9_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.150e-21 Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGHSDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVL 466
+ + E++ L L +D+V VFA ++D+G +D F C R+R + I+ +LF LF DG G VVDF ELASGLSVLCGGSR++++ +AF+L+D DG VSRED+ +L S+F+VL
Sbjct: 11 VSLAEVKRLTNLETQHLDDVLEVFAQRANDEGVLDRASFDACFASLLRPQAPEERKRTHI--ILSRLFDLFD--------------ADGNG-------VVDFTELASGLSVLCGGSRDDKIMSAFALYDTDNDGFVSREDIVTYLTSVFRVL 139
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A485K567_9STRA (Aste57867_395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K567_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.020e-18 Identity = 69/220 (31.36%), Postives = 105/220 (47.73%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGHSDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVLCAARQHLAVCQQPSSQHERVRSALGRSSPAALASRAVEESFAGLPRLGSVNVNQPPERITVEQFTRWY 670
+ +Q ++ L QL+ P EVF + + D +D F C D R R+ I+++LF++F D G GF V++ ELASGLS+LCGGSR+E+VQAAF L+D+ DG +S +++ +L S+FK+LC PS +P LA E+ FA V++ ++T+E+F RWY
Sbjct: 1888 VSLQTVKELTQLHLYPPSEVFDLLSQHMADPRGLDRPAFERCFASLIPPDALDDEGRHRLHLILDRLFNVF----------------DTNGNGF-----VNYHELASGLSILCGGSRQEKVQAAFDLYDLNHDGVISFDEMVRYLTSVFKILCDTNAEA----YPSDV-----------TPLELAQVTAEQCFA------QVDLKHDG-KLTLEEFDRWY 2064
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A7S2RBP6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBP6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.860e-18 Identity = 57/150 (38.00%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 17 MQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGHSDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVL 466
+ ELQ L L P + VF+VFA +DD+G + +GC + + R +++LF +F D GGG V F E ASGLSVLCGGSREE+ QA F LFDV GS+++ED+ +L S+FK+L
Sbjct: 879 LAELQELTCLEGFPAETVFQVFAECADDQGMLSRASCLGCFRALVQTSQGGPLTDGRATAAIDRLFRIF----------------DADGGG-----QVSFDEFASGLSVLCGGSREEKAQAVFGLFDVDAMGSITQEDMAVYLASVFKLL 1007
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A1V9ZNL8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNL8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.470e-18 Identity = 68/220 (30.91%), Postives = 112/220 (50.91%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGHSDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVLCAARQHLAVCQQPSSQHERVRSALGRSSPAALASRAVEESFAGLPRLGSVNVNQPPERITVEQFTRWY 670
L + +L+ L L +EVF +FA A+D+ G ++ F C Q + + + K + +LF+LF S+ G VVDF L+SGLS++CGGS+E++V+AAF+LFD GDG +S++++ +L+S+F+VL + H R+ LG S P LA +++F ++N +I++E+F RWY
Sbjct: 1263 LTLDQLKQLTNLVHFSAEEVFELFAEAADEDGNLNKKAFDSCFNQLIPT------KTPAIEKFLNRLFNLFD----------SEASG-----------VVDFSALSSGLSIMCGGSKEDKVKAAFALFDFNGDGYISQDEMTRYLHSVFQVL----------YEIGDDH---RTKLGVS-PLELAKATAQQAF------DEADLNHDG-KISLEEFKRWY 1434
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A7S1CE70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CE70_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.910e-18 Identity = 65/195 (33.33%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 92 SDDKGYMDWDRFMGCLCQFGHSDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVLCAARQHLAVCQQPSSQHERVRSALGRSSPAALASRAVEESF--AGLPRLGSVNVNQPPERITVEQFTRWY 670
+ + G + F C+ QF +D + R + E+LFSLF DG G VVDF ELASGLSVLCGG+R+++V AF L+D+ GDG +S E++ +L S+F++L QP + LG P LA+ E+ F A L R G ++++++FTRWY
Sbjct: 1 ASETGVLSRAAFFDCMRQFARADLTGAEE-TRATLVAERLFSLFD--------------ADGNG-------VVDFSELASGLSVLCGGTRDDKVSVAFQLYDLNGDGHISMEEMALYLTSVFRMLYET--------QPGTAER-----LGVP-PEELAAVTTEQCFRDADLNRDG---------KLSLDEFTRWY 150
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A0W8DU45_PHYNI (Short-chain specific acyl-CoA dehydrogenase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DU45_PHYNI) HSP 1 Score: 92.8 bits (229), Expect = 4.350e-18 Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGH----SDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVL 466
+ + ++ + L K DEVF +FA+ + G + + F C Q +D SL AR+ I+ +LF +F D VDFCEL SGLSVLCGGSREE+V+AAFSL+D+ DG +S +++ +L S+FKVL
Sbjct: 608 VSLDVVKQMTNLEKYTADEVFEIFANRCSENGTLSREAFEECFEQLVDEQYKNDEVSL---ARLRLILNRLFIIFDEN---------------------QDGTVDFCELTSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVL 739
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: K3WY98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY98_GLOUD) HSP 1 Score: 92.8 bits (229), Expect = 4.640e-18 Identity = 54/153 (35.29%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGHSDRWSLRQRA-RVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVL 466
+ +Q ++ + L DEVF +FA+ D G + + F C + + + QR R+ I+++LF++F DG G +VDFCEL+SGLSVLCGG+RE++V++AF+L+D+ DG +S E++ +L S+FKVL
Sbjct: 1364 VSLQVVKEMTHLENYAPDEVFEIFANRCSDDGTISREAFEECFEELIDEEFKNDEQRLERLRMILDRLFTIFDT--------------DGNG-------IVDFCELSSGLSVLCGGTREDKVRSAFALYDLNQDGFISLEEMAQYLTSVFKVL 1495
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A1V9ZAL1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAL1_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.720e-18 Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGHSDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVLCAARQHLAV 493
L + + + + +L + VDEVF FA +DD G + +DRF CL A + + ++LF F + VDF ELASGLSVLC GSR+ +V+AAFSL+D GDG +S +++ +L S+F+VL H+A+
Sbjct: 1075 LTLSDFRRITRLGALDVDEVFESFADYADDAGILTFDRFQACLLALAGPGT-----DAALPGVAKRLFRAFD---------------------LDKNNAVDFSELASGLSVLCKGSRDLKVKAAFSLYDYNGDGYISMDEMIRYLTSVFRVLYEVSPHMAL 1209
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: A0A3M6VB29_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB29_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.750e-18 Identity = 57/158 (36.08%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGH----SDRWSLRQRARVWKIMEQLFSLFA--HKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVL 466
+ + ++ + L K DEVF +FA+ + G + + F C Q + +D +L AR+ I+++LF +F H G VDFCEL+SGLS+LCGGSREE+V+AAFSLFD+ DG +S +++ +L+S+FKVL
Sbjct: 2004 VSLDVVKQMTNLEKYTADEVFEIFANRCAEDGTLSREAFEECFEQLVNEQYKNDEANL---ARLRLILDRLFVIFEEDHNG-----------------------TVDFCELSSGLSILCGGSREEKVRAAFSLFDLNKDGFISLDEMVRYLSSVFKVL 2135
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Match: W2ZEK2_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZEK2_PHYPR) HSP 1 Score: 92.8 bits (229), Expect = 4.750e-18 Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 11 LDMQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGH----SDRWSLRQRARVWKIMEQLFSLFAHKGGTPAPTASQGGGDGRGGGFADDCVVDFCELASGLSVLCGGSREERVQAAFSLFDVQGDGSVSREDLFFFLNSIFKVL 466
+ + ++ + L K DEVF +FA+ + G + + F C Q +D SL AR+ I+ +LF +F D VDFCEL SGLSVLCGGSREE+V+AAFSL+D+ DG +S +++ +L S+FKVL
Sbjct: 2005 VSLDVVKQMTNLEKYTADEVFEIFANRCSENGTLSREAFEECFEQLVDEQYKNDEVSL---ARLRLILNRLFIIFDEN---------------------QDGTVDFCELTSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVL 2136 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig100.1681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig100.1681.1 >prot_S-ischiensis_contig100.1681.1 ID=prot_S-ischiensis_contig100.1681.1|Name=mRNA_S-ischiensis_contig100.1681.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=218bp MQELQALLQLYKVPVDEVFRVFASASDDKGYMDWDRFMGCLCQFGHSDRWback to top mRNA from alignment at S-ischiensis_contig100:246948..253072- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig100.1681.1 ID=mRNA_S-ischiensis_contig100.1681.1|Name=mRNA_S-ischiensis_contig100.1681.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6125bp|location=Sequence derived from alignment at S-ischiensis_contig100:246948..253072- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig100:246948..253072- >mRNA_S-ischiensis_contig100.1681.1 ID=mRNA_S-ischiensis_contig100.1681.1|Name=mRNA_S-ischiensis_contig100.1681.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1308bp|location=Sequence derived from alignment at S-ischiensis_contig100:246948..253072- (Schizocladia ischiensis KU_0333)back to top |