|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 64.7 |
| Seed ortholog evalue | 7e-08 |
| Seed eggNOG ortholog | 2880.D7FKP5 |
| GOs | GO:0001101,GO:0002831,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005789,GO:0005886,GO:0008150,GO:0008289,GO:0009719,GO:0009723,GO:0009725,GO:0009751,GO:0010008,GO:0010033,GO:0012505,GO:0014070,GO:0016020,GO:0031090,GO:0031347,GO:0031410,GO:0031982,GO:0031984,GO:0032101,GO:0035091,GO:0042175,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046677,GO:0048519,GO:0048583,GO:0048831,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0070273,GO:0071944,GO:0080134,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:1900055,GO:1900056,GO:1900150,GO:1901700,GO:1901981,GO:1905622,GO:2000024,GO:2000026 |
| EggNOG free text desc. | Protein ENHANCED DISEASE RESISTANCE |
| EggNOG OGs | 2CMUG@1,2QS0N@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 745 |
| Cds size | 744 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815546.071612-CDS-S-ischiensis_contig100:52450..52576 | 1622815546.071612-CDS-S-ischiensis_contig100:52450..52576 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 52451..52576 - |
| 1695739761.1374009-CDS-S-ischiensis_contig100:52450..52576 | 1695739761.1374009-CDS-S-ischiensis_contig100:52450..52576 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 52451..52576 - |
| 1622815546.0827787-CDS-S-ischiensis_contig100:53679..53772 | 1622815546.0827787-CDS-S-ischiensis_contig100:53679..53772 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 53680..53772 - |
| 1695739761.1471126-CDS-S-ischiensis_contig100:53679..53772 | 1695739761.1471126-CDS-S-ischiensis_contig100:53679..53772 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 53680..53772 - |
| 1622815546.0928335-CDS-S-ischiensis_contig100:55544..55695 | 1622815546.0928335-CDS-S-ischiensis_contig100:55544..55695 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 55545..55695 - |
| 1695739761.1555128-CDS-S-ischiensis_contig100:55544..55695 | 1695739761.1555128-CDS-S-ischiensis_contig100:55544..55695 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 55545..55695 - |
| 1622815546.1049485-CDS-S-ischiensis_contig100:56668..56982 | 1622815546.1049485-CDS-S-ischiensis_contig100:56668..56982 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 56669..56982 - |
| 1695739761.163813-CDS-S-ischiensis_contig100:56668..56982 | 1695739761.163813-CDS-S-ischiensis_contig100:56668..56982 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 56669..56982 - |
| 1622815546.117211-CDS-S-ischiensis_contig100:57175..57235 | 1622815546.117211-CDS-S-ischiensis_contig100:57175..57235 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 57176..57235 - |
| 1695739761.1737373-CDS-S-ischiensis_contig100:57175..57235 | 1695739761.1737373-CDS-S-ischiensis_contig100:57175..57235 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig100 57176..57235 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig100.1668.1 >prot_S-ischiensis_contig100.1668.1 ID=prot_S-ischiensis_contig100.1668.1|Name=mRNA_S-ischiensis_contig100.1668.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=248bp
DRHFVLRTNTLEYFSKPSDAAPKGSFELHPACTVSAVKEMKTTSGKVLFT
IRLAWPLPNHPEDGDIKEEDKKNSSGGADPDIYVPPPTSPAVAAYSHHNA
NAGPASIDRSWSNASAMSTASAPPRLGPHDAEGLHKRGSGGARHGRSMLR
RQSAANEAGGTCVMLQKRPDNPTAKEETHNETIQGLVNAQNESRTRFVTI
KEQMEQLKERELSEKKKEEEKEKKKYHKQAATAAVAGSALLTLGVVTG back to topmRNA from alignment at S-ischiensis_contig100:52450..57235- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig100.1668.1 ID=mRNA_S-ischiensis_contig100.1668.1|Name=mRNA_S-ischiensis_contig100.1668.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4786bp|location=Sequence derived from alignment at S-ischiensis_contig100:52450..57235- (Schizocladia ischiensis KU_0333)
GATAGGCACTTCGTACTGAGGACCAACACGCTGGAGTACTTCTCAAAGCC
AAGCGACGCCGTGAGTCACACTCCTGCTTTTGGACTGGAGACCCGCTTGG
TATCCTGCATATGGGCCCGGAGCACAATTTTCCGCAGTGCCACGTGGGCC
GCTGTGCTTGTAGTGCTTGGGGAAGGAGAGGCGTAACTTATGGTTTCGTG
GACAACGGCGTCCCCGACTAACACACGTCTCCCCTCTCTCCCTCCCTGTC
CAGGCCCCCAAGGGCTCCTTCGAGTTGCACCCCGCGTGCACGGTGTCGGC
GGTGAAGGAGATGAAGACCACGAGCGGCAAAGTCCTCTTCACAATACGCC
TCGCCTGGCCGCTCCCCAATCACCCGGAAGATGGAGACATCAAGGAGGAG
GACAAGAAAAACTCTTCAGGGGGGGCTGACCCGGATATATACGTGCCCCC
TCCCACCTCACCCGCAGTAGCTGCGTACAGTCACCACAACGCCAATGCTG
GACCGGCCTCCATTGACCGCTCGTGGAGCAACGCGTCAGCCATGAGCACC
GCCAGCGCTCCTCCCAGGTGAGGCACACTATGTACGAGTACCTAACTTAT
TCACAAGTCCTTCCAAGCAATGAGGTACTTGGGTCATAGAGAAGTACGGA
TGGGCATGCCAGCCAACGCAACAGTCGCAGTACTGACATTGGAATCACTT
GGACGTCGGTTTTGCGGTTTTGGAGTCAATCCCGGAGTAGTACAGTAGCG
CAAGCACAAGATAGTGCAGGGAGCGTATGGTGTTGCTTCGTTGGTAGTGG
TTGACAGTCCGCCAAAGCCATTGGCCCATTGGCCAGGGCTTGAAAGCCAG
CAGACCAAAACTTGCGTTTTAAATAAGTATGCACTTGAGTACTACGGGTT
CAAGTTCTGTTAAGTATCGGCGACCTAGTGGTCTGGATCAATCATCGCTG
TTGTTCCTCCCATGACCGTTAGAGTGCTGATGCGCCCACGAGCAAACTCT
GCGAAGAGACTCACAAGTATGCGCTGACGGCTAAGTATGCTTGGCCGTAA
TCCAGCGAGCAACCCCTCATCCGGTTTGCCGACGCCAAGGCAGAATGACC
TTCCGGGCTTGGCCAGCGCGCGGCATGGCCGGTGCAAACCCGGCATGCTC
CGTCCTGGCGTAGTTGGGATGCGAGCGTCAATGGCGAAATAGCCACAGTA
CTCTGTCAGAGCGCAAACCCGAAGTTCAAGTTTGGGTTGTTGCACGCAAG
GGTGCATATGTCGCAAGACAAGCGAATGAGTACATGTACTTATATGTTGA
CCAAGTTGGCCAGAACGCTGCCAAGTTTCTACAGAGAGAGACTGAAGGGA
GAGAGGTGGGGAGAGACAGAGGGGGACGGGGAGGGGGAGGCGAGTGGGGG
AAGAGAGGTAGAGGAGACGAGAGGCAGAACTCTATTGTGTCACACTCGTT
TTTGAGCCACAAACCAGCTACCGCTGCCATTCGAGAGAGAGGAGAGAGAG
AGCCCTTGTCTCCGCCTGGCCGCGTGTGCTGCGTGTACAGGCTGGGCCCT
CATGATGCAGAGGGTTTGCACAAGCGCGGCAGCGGCGGAGCTCGGCATGG
GCGATCCATGCTCCGGAGGCAAAGTGCGGCCAACGAGGCCGGCGGCACTT
GCGTAATGCTGCAGAAGAGGCCCGACAACCCAACTGCCAAGGTATGCGCA
TTTGTGTATGTGACTCGTAGCTGCTTCGCCTAGGTCGGGGTGCGTGGTCA
ATGGTCTCGGGACTACGGCAAGCACCACGTGAGTACATATATATACTCGT
TCAATTATTCTCGTTGCGCTTGCCATAGCCCAGCGAATGTTTTACCGAAC
AACCTCCGCTGACAGCAGAGCAGTCCCGCTCCCGCAATGCCCGCACGGGG
AGGGTCCCCTCCCCTGCCTCTTCCTCCGTTTCCAGTTTGTGTGATACCAG
CATTGAAGTACTCTACTTCGAAGGAGCCCCCGAGTACTACAGGTTGCACT
CTGTGCACCTTACTGTACAGTGATGGAATATCGATCAGTGGATAGCTATC
GGGTTCAAGGTATTTTGTGGGTGGCGTTACCAGCTACTTGGACTTAGTGT
GGGTCAAAACTATCGAATATCGACTATCGATAGATATATAGATCAGTAGT
GTCGATAAATAGGTTGATTTTCTTACAGTAGATATATTCCATAACGGCCT
CGGCATGGCGGAGGTTTGGACCATCCAATGCAGACGCCGAGGTCATTCGC
CTCTGGGCTGGAGCGGTTGTACAGCGCACTGTTGGATGTGACAATTTACT
AGTATGTGGGCACGGCTTCTTCCACTCATTGGTGCACCGTTATATATGTG
CTCACGTGGTGCTTGCCGTAGTCCTGAGACCATTGACCACGCGCCTCTGT
CGAGACGCAGCAGGACCCCTCCGTCCCCTGGCACAGCTGCATTTTGTATT
GCCCAAGTGGGGTTTGCGCTGTTCGGTAGACATAGTCAGTGCGTAGAGCA
CAGCAGTATCTCGAGTACTCTACCCAGACGCACGTGCACTTCTCTGTACT
CTACTGCCAGTATTATTGCAGTAGAGAGCTTTTTGAAAGGTGTACTCGTA
CAGATGGATTACTGGACATGCGTGTACTGGGAAAGGCAAGTAGATGATAC
TCGACAGGCCGCGTTTGTATTGAGAGAACGAGTCCCCTACTTGTACAGGG
CTGGCAACCAGTGGGGCCGCCTTAGAACCACGCCGGTCCCGTGGGCTGGC
CACAGTGAGTGCTCACATCTCTTTGCCCCTGTGCAAGTACCGTACTCGGT
ATATACACAACGAAGTACTACGAATATATATATATGTACTCACGTGGTGC
TTGCCGTAGTCCCGAGACCATTGACCACGCTTACCGGTCAAGACGGAGCA
GGACCCCACCGTATGACGGAAAATAGCGACCCGGCTTTAGATAGCAACCC
CCCCTTAGAAAACAACCCCGGGCGGTCGCTCCAATTTCCAGCTGGAAAAG
ATATCCCCCGGGCTTATGTAGAAGACAAACAACCCCCCCTGCGTCGCCCG
GCCGGGGCCATGAAACTTGCTCGGGAAGCCTGAGATGAGGAGGGCCCAGC
ATGAGTCGCCAGGCGACTTTGAACACGCCAGCACTGTGGGGGCACGCAAA
TTATGATGGCAGCAAGACTAAAAGCAACCTAGCGGGTTTTGCCCTTTTTT
GTGGGCGTCGCAGCCCCGTCCACTGTGTCGCCACTCGCGTCCACCCAAGC
CTCGGAGCGTGCGGCACGGGCATCCGTGAAGCCCTCGCCGCCGCTGCAGC
CCTCCATCCCGTGCCCTCGTCGCCAGCCGCTGCAACCCTCCATCGCTCCA
TAGGTAGGCTTTAATGGCTCATGTGCTCTGCTCGGTGCTGTAAGAGTGCC
GTAACACATGCAAGGACAACAAGCCATGACAACACCAAACCACCACAATA
ACGATACATGCAGGAGGAGACACACAACGAGACCATCCAGGGGCTGGTCA
ATGCCCAGAACGAGAGCCGCACCCGCTTCGTCACGATCAAGGAGCAAATG
GAGCAGGTGCGCAGCTACAGGGGTTGAGGGTTTGTGGTGGTGGTGGTGGT
GGTGGTGGTGATGGTACTTGTACAGGGGCATCACTTGACATCCACTTGTC
CTAGTACGGGTGATCAACGCCTGTAGCAAGATGACCACGAGGATTTCCTC
GGGGCATGTACTCGCACGATGTACAGTATACTTCGAAGTATATACTGTAC
AGTAGTACACTCTGTGAGCCTGCGACAGTCTACTGTACTGTTCTGTAGTA
CCCGAGAAATTTTATTCCTCCATCGGTACACTGAGGCCTGGCGTGATGAG
TACACGCACGCGCACGATGCATGCATCCATGCACGCACAGAAACTACCTC
AAGGTACTCTTACTGTTTGACAACTTTTCCCATCTTTCTCTGGGAGCGGG
GGGGTGGCGTAGAAGCGCTTGTATCTCAAGGGCAACATGCAAAGAGGCAG
GAGAGGGGGCGCAAGGAGCACTATGTAGAAAACGGCCTCCTTACTGCTGT
GAATAGCCTTGCCTTTTGGGTTGATGATATGCCGAGCACTTCAATCTCAC
CCCCCAGACTGCGTACCTGGGCTTCGCTGTGCGCGTGCTTGTCATCAGTG
ATGGAATATTCATCAGTAGACAGCTATCGGGCTCGACTGATTTTGTGGGT
GGCGTTGCTAACTACTTCTACTTGGATTTAGTGCGGGTCAAACTATCGAA
TATCGACTATCGATAGATACATATATCAACGTGTGTAGTCACGTCTCTGT
GCATGCCCTGGACCCGAACAATCCTCGTCTTTGCTCCTTCTCGTGGATCG
CAGGCCGGCTGTAGCCAAAGCCATTGGCCACGCGTCCTATTGGACGGAGC
ACGCCGGGATATATAGATCCCGCAACGCAGCACGAGAGAGACCCCTTGTA
TTGCCCTTGCCTTCCCCTCTTTGTAGTTTGTTTTCTTGATTTTTGTGCCC
TGCGGGTGAAAAGAAGGGCTTCTGGTGAGGTCCCCACCTTAGGTTGTTGG
GACGGGCCCCGGAACTCGCATTCATCAAACTAGTTCAAAATCAGTGCTGT
CGATAAATAGGTTGACTTGCTTAGATATTCCATCACTGCTTGTCGCCGTA
CTTATTCAGCTGAAGGAGCGGGAGCTCAGCGAGAAGAAGAAGGAGGAGGA
GAAGGAGAAAAAAAAGTACCACAAGCAGGCGGCCACGGCGGCTGTCGCAG
GCTCCGCGCTACTGACCCTGGGCGTGGTGACCGGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig100:52450..57235- >mRNA_S-ischiensis_contig100.1668.1 ID=mRNA_S-ischiensis_contig100.1668.1|Name=mRNA_S-ischiensis_contig100.1668.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1488bp|location=Sequence derived from alignment at S-ischiensis_contig100:52450..57235- (Schizocladia ischiensis KU_0333)
GATAGGCACTTCGTACTGAGGACCAACACGCTGGAGTACTTCTCAAAGCC
AAGCGACGCCGATAGGCACTTCGTACTGAGGACCAACACGCTGGAGTACT
TCTCAAAGCCAAGCGACGCCGCCCCCAAGGGCTCCTTCGAGTTGCACCCC
GCGTGCACGGTGTCGGCGGTGAAGGAGATGAAGACCACGAGCGGCAAAGT
CCTCTTCACAATACGCCTCGCCTGGCCGCTCCCCAATCACCCGGAAGATG
GAGACATCAAGGAGGAGGACAAGAAAAACTCTTCAGGGGGGGCTGACCCG
GATATATACGTGCCCCCTCCCACCTCACCCGCAGTAGCTGCGTACAGTCA
CCACAACGCCAATGCTGGACCGGCCTCCATTGACCGCTCGTGGAGCAACG
CGTCAGCCATGAGCACCGCCAGCGCTCCTCCCAGGCCCCCAAGGGCTCCT
TCGAGTTGCACCCCGCGTGCACGGTGTCGGCGGTGAAGGAGATGAAGACC
ACGAGCGGCAAAGTCCTCTTCACAATACGCCTCGCCTGGCCGCTCCCCAA
TCACCCGGAAGATGGAGACATCAAGGAGGAGGACAAGAAAAACTCTTCAG
GGGGGGCTGACCCGGATATATACGTGCCCCCTCCCACCTCACCCGCAGTA
GCTGCGTACAGTCACCACAACGCCAATGCTGGACCGGCCTCCATTGACCG
CTCGTGGAGCAACGCGTCAGCCATGAGCACCGCCAGCGCTCCTCCCAGGC
TGGGCCCTCATGATGCAGAGGGTTTGCACAAGCGCGGCAGCGGCGGAGCT
CGGCATGGGCGATCCATGCTCCGGAGGCAAAGTGCGGCCAACGAGGCCGG
CGGCACTTGCGTAATGCTGCAGAAGAGGCCCGACAACCCAACTGCCAAGG
CTGGGCCCTCATGATGCAGAGGGTTTGCACAAGCGCGGCAGCGGCGGAGC
TCGGCATGGGCGATCCATGCTCCGGAGGCAAAGTGCGGCCAACGAGGCCG
GCGGCACTTGCGTAATGCTGCAGAAGAGGCCCGACAACCCAACTGCCAAG
GAGGAGACACACAACGAGACCATCCAGGGGCTGGTCAATGCCCAGAACGA
GAGCCGCACCCGCTTCGTCACGATCAAGGAGCAAATGGAGCAGGAGGAGA
CACACAACGAGACCATCCAGGGGCTGGTCAATGCCCAGAACGAGAGCCGC
ACCCGCTTCGTCACGATCAAGGAGCAAATGGAGCAGCTGAAGGAGCGGGA
GCTCAGCGAGAAGAAGAAGGAGGAGGAGAAGGAGAAAAAAAAGTACCACA
AGCAGGCGGCCACGGCGGCTGTCGCAGGCTCCGCGCTACTGACCCTGGGC
GTGGTGACCGGGCTGAAGGAGCGGGAGCTCAGCGAGAAGAAGAAGGAGGA
GGAGAAGGAGAAAAAAAAGTACCACAAGCAGGCGGCCACGGCGGCTGTCG
CAGGCTCCGCGCTACTGACCCTGGGCGTGGTGACCGGG back to top
|