mRNA_S-ischiensis_contig10.1662.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1662.1
Unique NamemRNA_S-ischiensis_contig10.1662.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: D7G6K3_ECTSI (2-cys peroxiredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K3_ECTSI)

HSP 1 Score: 496 bits (1276), Expect = 1.060e-165
Identity = 234/331 (70.69%), Postives = 272/331 (82.18%), Query Frame = 3
Query:   57 RSFHATSLRSEIYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGETDPLQVGEHVVTISTPEQYREVISKGAAVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELSKAA 1049
            R+ H T   + I+YPAP A I E APGF  KAV D +IVD+S + Y+GKW VLLFYPKDWTFVCPTEIIAFSDRH EFE LGAQVL ISTDTEDSHLAW RHPRKRGGLGHM+IPLVADPTKEI+ADYGVLI   GIALRGLFIINPEG+LEQVTIN L +GR VDE LRLIQAHQF+A+HGEVCPA WKPGD+TMK  LD +MEYFSSGATE E DPL+ G+ +V I++P  +++V S+  AVVDFVAPHCGKCRQ++PFV ELSE+   +TFAKFDTT+EA+SEL+ + GV+A+PAFRF+R G+E    + GYKK  LR+ VEEL K A
Sbjct:   57 RAMH-TEQEASIFYPAPSANIMEPAPGFKAKAVVDGDIVDVSTDDYKGKWVVLLFYPKDWTFVCPTEIIAFSDRHSEFEALGAQVLGISTDTEDSHLAWTRHPRKRGGLGHMRIPLVADPTKEISADYGVLIPSLGIALRGLFIINPEGILEQVTINNLGIGRDVDETLRLIQAHQFLAKHGEVCPAGWKPGDKTMKPGLDASMEYFSSGATESEEDPLEAGDKMVVINSPNDFKDVTSEALAVVDFVAPHCGKCRQMMPFVKELSEEFPEVTFAKFDTTEEAISELSTDLGVEALPAFRFYRKGEEVVEPVMGYKKKKLRAAVEELQKKA 386          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: A0A835YLA5_9STRA (2-cys peroxiredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA5_9STRA)

HSP 1 Score: 441 bits (1134), Expect = 1.820e-144
Identity = 217/329 (65.96%), Postives = 261/329 (79.33%), Query Frame = 3
Query:   60 SFHATS-LRSEIYYPAP--CATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGETDPLQVGEHVVTISTPEQYREVISKGAAVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEEL 1037
            +FHAT    + I+Y      A IG+ AP F T AV D EI  ISLEQY+GKW VLLFYPKD+TFVCPTEIIAFSDRH EFE L AQVLAISTDTE+ HLAW + PRK+GGLGHM+IPLVAD TK IAADYGVLI+D GIALRGLFIINP+GVLEQ+TINGL VGRSVDE LRL+ A+QFVAEHGEVCPA W PG +TMK + +G++EYFS+   EGE D L   + V  I TP+ Y+ VI +G AVVDFVAP+CGKCRQ++P+VNELSE+++++TFAKFDTT++AL EL+ + GV+A+PAF FF +GK     +TGYKK  L++ VE L
Sbjct:   53 AFHATPRAHANIWYDTEETAAVIGKPAPTFETAAVIDGEIEKISLEQYKGKWTVLLFYPKDFTFVCPTEIIAFSDRHDEFEKLNAQVLAISTDTEECHLAWTKVPRKKGGLGHMKIPLVADTTKSIAADYGVLIQDLGIALRGLFIINPDGVLEQITINGLPVGRSVDETLRLLAAYQFVAEHGEVCPAGWTPGGKTMKADAEGSLEYFST--VEGEGDVLAASDKVKVIKTPQDYKNVIKEGKAVVDFVAPYCGKCRQIMPYVNELSEKYQDVTFAKFDTTEDALVELSADLGVQALPAFHFFNNGKPVGTPVTGYKKKALQAGVEAL 379          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: A0A7S3UWW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWW5_HETAK)

HSP 1 Score: 418 bits (1075), Expect = 9.930e-136
Identity = 203/319 (63.64%), Postives = 248/319 (77.74%), Query Frame = 3
Query:   90 IYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGET--DPLQVGEHVVTISTPEQYREVISKGAAVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELS 1040
            I Y    A IG+ AP F   AV D EI ++ L  YRGKW VLLFYPKD+TFVCPTEIIAFSD    F+ L A+VLA+STDTE+SHLAW+R PRKRGGLGHMQIP+VAD TK I+ADYGVL+ED GIALRGLF+INPEGVLEQ+T+N L VGRSVDE LRL+QA QFVAEHGEVCPA WKPG++TM  + +G++ YF +GATE     DPL  G+ VV + +P+ Y +VI +   VVDFVAP CGKCRQ++PFVN+L+  H  +TFAKFDTT++ALSEL+ E GVKA+PAFRFF++G+     + GYKK  L+  VE+L+
Sbjct:   58 ITYSPSEAKIGKPAPTFKAGAVVDGEITEVDLGDYRGKWTVLLFYPKDFTFVCPTEIIAFSDAAPRFKALNAEVLALSTDTEESHLAWIRTPRKRGGLGHMQIPIVADVTKAISADYGVLLEDIGIALRGLFLINPEGVLEQITVNNLPVGRSVDETLRLLQAFQFVAEHGEVCPANWKPGEKTMIPDPEGSLAYFETGATEDPDAEDPLAAGKGVVVLRSPQDYYDVIKEERVVVDFVAPWCGKCRQIMPFVNKLAAGHPGVTFAKFDTTEDALSELSAELGVKALPAFRFFKNGQPSGEVVVGYKKKPLQDAVEKLA 376          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: A0A4D9CSY7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSY7_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 1.760e-132
Identity = 198/329 (60.18%), Postives = 248/329 (75.38%), Query Frame = 3
Query:   69 ATSLRSEIYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATE-GETDPLQVGEHVVTISTPEQYREVISK-GAAVVDFVAPHCGKCRQLLPFVNELSEQHRN-ITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELSKA 1046
            AT     + Y  P   +G+ AP F+  AV D E+  ISL  Y+GK+  LLFYPKD+TFVCPTEIIA+SD    FED+GA+V+ ISTDTE+SHLAWVR PRKRGGLGHMQIPLVAD TK IAADYGVL+ED GIALRGLF+I+PEGVL+Q+T+N L VGR+VDE +RLIQA QFVA+HGEVCPA W PGD+TMK + +G++EYF+SGATE  E DPL+ G H+VT    +  +E++ K G  V+DFVA  CGKC+Q++PFVN+LSE H   +TF K DTT++AL+E   E GV  +PAF F +DGK + P + GYKK  L+  V  L+K+
Sbjct:   38 ATRAMGTVTYSPPAVKVGQAAPDFTAGAVVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEDIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEVCPAGWTPGDKTMKADPEGSLEYFASGATEESEQDPLEGGPHIVTAKDGKHLKELLGKKGKVVLDFVAGWCGKCKQIMPFVNDLSEAHAGEVTFVKIDTTEDALAEAVAEHGVSVLPAFHFIKDGKMYRPPVVGYKKTPLKEGVAALAKS 366          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: A0A7S0QX20_9CHLO (Thioredoxin-dependent peroxiredoxin n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QX20_9CHLO)

HSP 1 Score: 390 bits (1002), Expect = 9.640e-125
Identity = 195/346 (56.36%), Postives = 245/346 (70.81%), Query Frame = 3
Query:   27 PAAAFGAQLPRSFHATSLR----SEIYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGETDPLQVGEHVVTISTPEQYREVISKGA-AVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELSKAA 1049
            P A   A +P ++ A   +    +++ YP+P   +G+ AP FS  AV D EI  ISL+ Y+GKW VL FYPKD+TFVCPTEIIAFSDR KEF DL  QV+A STDTE+ HLAW + PRK+GGLGHMQIP+VAD TK I+A YGVL+ED GIALRGLFIINPEGV+EQ+T+N L VGR VDE LRL+ A QFVAEHGEVCPA WKPG++TM  + D +M+YFS   T  E D       +  + +  +Y  +++ G   VVDF+AP CGKCRQ+ PFV+ L +QH ++TFAKFDTT E +   + E GVKA+P F+FF+ GKE  P + GYKK  L   V+ L+ AA
Sbjct:   46 PVARLPAVMPFAYQAVQPKCTSSTQVTYPSPEVFVGKPAPTFSAGAVVDGEITSISLDDYKGKWVVLFFYPKDFTFVCPTEIIAFSDRAKEFADLNCQVIAASTDTEECHLAWTKTPRKKGGLGHMQIPIVADVTKAISAQYGVLLEDIGIALRGLFIINPEGVVEQMTVNNLPVGRCVDETLRLLTAFQFVAEHGEVCPANWKPGEKTMVADPDASMDYFS---TLNEEDDF--AGKLTPLKSKSEYDALVATGKPVVVDFMAPWCGKCRQIAPFVDTLIDQHPDVTFAKFDTTVEGMDVASAELGVKALPVFKFFKGGKEVVPEVVGYKKKPLEEAVKSLAGAA 386          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: A0A196SF67_BLAHN (Thioredoxin-dependent peroxide reductase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SF67_BLAHN)

HSP 1 Score: 375 bits (963), Expect = 1.760e-119
Identity = 185/333 (55.56%), Postives = 240/333 (72.07%), Query Frame = 3
Query:   48 QLPRSFHATSLRSEIYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGETDPLQVGEHVVTISTPEQYREVIS-KGAAVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELSK 1043
            Q+ RSF      S+I Y    A + + AP F   AV DN+I  ++LE YRGK+ VL FYPKD+TFVCPTEIIAFSDR +EFE L  ++LA S DT +SHLAW++ PRK+GGLG+MQIP++ D TKEIA+ YGVL+ D G+ALRGLFIINP+GV+EQ+T+N L VGRSVDE LRL+QA QFV +HGEVCPA WKPG++T+  N   + EYF SGATE   D   +G+ V+ I   +Q++E+++ K   VVDF AP CGKC+ + PF N+L+ + +++TFA  DTT + L + A + GV  IP+F FF+DGKE  P ITGYKK M+   VE L K
Sbjct:   26 QVARSF------SQITYGPSQAFVRQPAPLFKAPAVVDNDITTVNLEDYRGKYVVLFFYPKDFTFVCPTEIIAFSDRAQEFEKLNTKLLACSCDTVESHLAWIKTPRKKGGLGNMQIPIIGDNTKEIASKYGVLVNDLGVALRGLFIINPQGVIEQITMNNLPVGRSVDEVLRLVQAFQFVEQHGEVCPANWKPGEKTI--NTKDSSEYFGSGATESAVDEKLMGKDVIEIQDEKQFKELVATKKNLVVDFYAPWCGKCKMISPFYNKLAGERKDVTFASVDTTADKLEKFAADYGVDHIPSFHFFKDGKEAGPVITGYKKQMIAKQVEALFK 350          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: UPI000711D4E5 (thioredoxin-dependent peroxide n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711D4E5)

HSP 1 Score: 366 bits (939), Expect = 5.750e-116
Identity = 177/319 (55.49%), Postives = 233/319 (73.04%), Query Frame = 3
Query:   90 IYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGETDPLQVGEHVVTISTPEQYREVISKGA-AVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELSK 1043
            IY P+  A + + AP F   AV DN+I  ISL+ Y+    VL FYPKD+TFVCPTEIIAFSDR +EFE L  +++A S DT +SHLAW++ PRK+GGLG M+IP++ D TKEIA+ YGVL+ D G+A RGLFIINP+GV+EQ+TIN L VGRSVDE LRL+QA QFVAEHGEVCPA WKPGD+T+  + D ++E+F SGATE   D + +G+ VV +   + +RE+++     VVDF AP CGKC+ + PF N+L+ + +++TFA  DTT + L + A + GVK IP+F F++DGKE  P ITGYKK ++   VE L K
Sbjct:   34 IYGPSQ-AFLRQPAPTFKAPAVVDNDITTISLDDYK----VLFFYPKDFTFVCPTEIIAFSDRAEEFEKLNTKLIACSCDTVESHLAWIKTPRKKGGLGQMKIPIIGDNTKEIASKYGVLVNDLGVASRGLFIINPQGVIEQITINNLPVGRSVDETLRLVQAFQFVAEHGEVCPANWKPGDKTINTSGDNSLEFFGSGATESPVDEIMMGKDVVEVKDEKHFRELLATTKNLVVDFYAPWCGKCKMIAPFYNKLAGERKDVTFASVDTTADRLEKFAADYGVKHIPSFHFYKDGKEVGPEITGYKKQLISKQVEALFK 347          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: D8MAV9_BLAHO (Thioredoxin-dependent peroxide reductase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAV9_BLAHO)

HSP 1 Score: 366 bits (939), Expect = 6.150e-116
Identity = 171/319 (53.61%), Postives = 234/319 (73.35%), Query Frame = 3
Query:   84 SEIYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGETDPLQVGEHVVTISTPEQYREVISKGAA-VVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEEL 1037
            S+I Y    A + + AP F   AV DN+I  ++LE Y+GK+ VL FYPKD+TFVCPTEIIAFSDR +EF  +  +++A S DT +SHLAW++ PRK+GGLG+M+IP++ D TKEIA+ YGVL  + GIALRGLFIINP+GV+E +T+N   VGRSVDE LRL+QA QFVAEHGEVCPA WKPG++T+    D ++EYF SGATE + D   +G+ VV +   + ++E+++     VVDF AP CGKC+ + PF N+++ +++N+ FA  DTTDE L + A + GVK IP+F F+++GKE A  ITGYKK ++   V++L
Sbjct:   29 SQITYGPSQAFVTKPAPTFKAPAVVDNDITTVNLEDYKGKYVVLFFYPKDFTFVCPTEIIAFSDRVEEFRKINTELIACSCDTVESHLAWIKTPRKKGGLGNMKIPIIGDNTKEIASKYGVLHNELGIALRGLFIINPQGVIENITMNNFPVGRSVDETLRLVQAFQFVAEHGEVCPANWKPGEKTINTKGDNSLEYFGSGATESKEDEHLMGDDVVQVRDEKHFKELLNGSKQLVVDFYAPWCGKCKMIAPFYNKMAAENKNVVFASVDTTDEKLEKFAADYGVKHIPSFHFYKNGKEAAAEITGYKKQLIAKQVKDL 347          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: A0A8J9RB28_9CHLO (Peroxiredoxin-2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RB28_9CHLO)

HSP 1 Score: 365 bits (937), Expect = 8.970e-116
Identity = 170/320 (53.12%), Postives = 232/320 (72.50%), Query Frame = 3
Query:   84 SEIYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATEGETDPLQVGEHVVTISTPEQYREVISKGA-AVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELS 1040
            S + YP   A +G  AP FS  AV D +I  +SL+ Y+G+W +L +YPKD+TFVCPTEIIAFSDR +EF DL   ++A STDTE+ HLAW++ PR +GGLGHM+IP++AD  KEIAA YGVL ED G+ALRGL+IINP+  +EQ+T+N + +GR+VDE  RL+QA QFVAEHGEVCPA+W+PG +++K + DG++EYFS    E   +  + G+ + +I +P+++++++      VVDF AP CGKCRQ+ PFV +L E+H  ITF K DTT+E L  L  E GVK +P F+FF+ GKE    I+GYKK ML   ++ L+
Sbjct:   22 STVIYPPSEAKVGGPAPDFSAPAVIDGDISSVSLKDYKGRWLILFWYPKDFTFVCPTEIIAFSDRVEEFNDLNCDLIAASTDTEEVHLAWIKTPRNKGGLGHMKIPIMADTKKEIAARYGVLKEDAGVALRGLYIINPDQNIEQITMNNMGIGRNVDEAKRLLQACQFVAEHGEVCPADWQPGGKSIKPSADGSIEYFSEAGKESSHEE-EFGQAIKSIKSPQEFQQLVQGDKPVVVDFYAPWCGKCRQIAPFVEQLQEKHPEITFVKADTTNEQLEGLTAEQGVKVLPTFKFFKGGKEVREPISGYKKKMLEDGIKSLA 340          
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Match: A0A2V0PM19_9CHLO (Thioredoxin-dependent peroxiredoxin n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PM19_9CHLO)

HSP 1 Score: 366 bits (939), Expect = 3.270e-115
Identity = 182/328 (55.49%), Postives = 234/328 (71.34%), Query Frame = 3
Query:   69 ATSLRSEIYYPAPCATIGEEAPGFSTKAVSDNEIVDISLEQYRGKWAVLLFYPKDWTFVCPTEIIAFSDRHKEFEDLGAQVLAISTDTEDSHLAWVRHPRKRGGLGHMQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSVGRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGATE-GETDPLQVGEHVVTISTPEQYREVISKGA-AVVDFVAPHCGKCRQLLPFVNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPSITGYKKNMLRSTVEELSKA 1046
            A      I YPAP A +GE AP F+  AV D EI  + L  YRGK+ VL FYPKD+TFVCPTEIIAFSDR KEFE L  QV+A STDTE++HLA V+ PR RGGLG+M IP+VAD TKE+AA YGVL+E  GIALRGLFIINPEG+++Q+ IN L +GRSVDE LRL+QA QF A+HGEVCPA+WKPGDRT+  + + +++YFS      G+ D  +    V +I++  ++  +++     VVDF+AP CGKCR + P V+ L+ +H ++ FAK DTT + LS L DE GVK +PAF+F+R GKE    + GYK+  L   VE+LS+A
Sbjct:   75 ALGFEDRILYPAPKAFVGERAPDFTAPAVVDGEIKTVRLADYRGKYVVLFFYPKDFTFVCPTEIIAFSDRAKEFEALNCQVIAASTDTEETHLAGVKTPRNRGGLGYMAIPIVADTTKEVAARYGVLLERAGIALRGLFIINPEGIIQQIGINDLPIGRSVDETLRLLQAIQFHAQHGEVCPADWKPGDRTIVADPERSLDYFSGVPDHMGDEDEYK---GVASIASRAEFDALVAGDKPVVVDFMAPWCGKCRMIAPLVSSLAAKHPDLVFAKVDTTKDGLSTLTDELGVKGLPAFKFYRGGKEVVDQVVGYKRKPLEEAVEKLSRA 399          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6K3_ECTSI1.060e-16570.692-cys peroxiredoxin n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YLA5_9STRA1.820e-14465.962-cys peroxiredoxin n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S3UWW5_HETAK9.930e-13663.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CSY7_9STRA1.760e-13260.18Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0QX20_9CHLO9.640e-12556.36Thioredoxin-dependent peroxiredoxin n=1 Tax=Pyrami... [more]
A0A196SF67_BLAHN1.760e-11955.56Thioredoxin-dependent peroxide reductase n=1 Tax=B... [more]
UPI000711D4E55.750e-11655.49thioredoxin-dependent peroxide n=1 Tax=Blastocysti... [more]
D8MAV9_BLAHO6.150e-11653.61Thioredoxin-dependent peroxide reductase n=1 Tax=B... [more]
A0A8J9RB28_9CHLO8.970e-11653.13Peroxiredoxin-2 n=1 Tax=Coccomyxa sp. Obi TaxID=23... [more]
A0A2V0PM19_9CHLO3.270e-11555.49Thioredoxin-dependent peroxiredoxin n=1 Tax=Raphid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3564306..3573149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.5
Seed ortholog evalue6.3e-85
Seed eggNOG ortholog2880.D7G6K3
KEGG rclassRC01003,RC01872
KEGG koko:K03386,ko:K03671,ko:K11186,ko:K13279,ko:K20011
KEGG ReactionR08360,R08362
KEGG Pathwayko00480,ko01100,ko04146,ko04214,ko04621,ko05418,map00480,map01100,map04146,map04214,map04621,map05418
GOsGO:0003674,GO:0003824,GO:0004791,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006109,GO:0006950,GO:0006979,GO:0008047,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009532,GO:0009534,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009636,GO:0009642,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019222,GO:0019725,GO:0019904,GO:0030234,GO:0031976,GO:0031984,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043085,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044092,GO:0044093,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0080090,GO:0097237,GO:0098754,GO:0098772,GO:0098869,GO:1990748
EggNOG free text desc.peroxiredoxin activity
EggNOG OGsCOG0450@1,COG0526@1,KOG0852@2759,KOG0907@2759
EC1.11.1.15
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03110,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog description2-cys peroxiredoxin
Ec32 orthologEc-05_006500.1
Exons8
Model size2614
Cds size666
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1662.1prot_S-ischiensis_contig10.1662.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3565865..3571014 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815544.5987253-UTR-S-ischiensis_contig10:3564305..35658641622815544.5987253-UTR-S-ischiensis_contig10:3564305..3565864Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3564306..3565864 -
1695739760.1711009-UTR-S-ischiensis_contig10:3564305..35658641695739760.1711009-UTR-S-ischiensis_contig10:3564305..3565864Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3564306..3565864 -
1622815544.6868024-UTR-S-ischiensis_contig10:3571014..35711731622815544.6868024-UTR-S-ischiensis_contig10:3571014..3571173Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3571015..3571173 -
1695739760.242154-UTR-S-ischiensis_contig10:3571014..35711731695739760.242154-UTR-S-ischiensis_contig10:3571014..3571173Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3571015..3571173 -
1622815544.697685-UTR-S-ischiensis_contig10:3572047..35721831622815544.697685-UTR-S-ischiensis_contig10:3572047..3572183Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3572048..3572183 -
1695739760.2524033-UTR-S-ischiensis_contig10:3572047..35721831695739760.2524033-UTR-S-ischiensis_contig10:3572047..3572183Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3572048..3572183 -
1622815544.7090335-UTR-S-ischiensis_contig10:3573055..35731491622815544.7090335-UTR-S-ischiensis_contig10:3573055..3573149Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3573056..3573149 -
1695739760.2624516-UTR-S-ischiensis_contig10:3573055..35731491695739760.2624516-UTR-S-ischiensis_contig10:3573055..3573149Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3573056..3573149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815544.6098652-CDS-S-ischiensis_contig10:3565864..35660221622815544.6098652-CDS-S-ischiensis_contig10:3565864..3566022Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3565865..3566022 -
1695739760.1825676-CDS-S-ischiensis_contig10:3565864..35660221695739760.1825676-CDS-S-ischiensis_contig10:3565864..3566022Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3565865..3566022 -
1622815544.6195652-CDS-S-ischiensis_contig10:3566859..35670401622815544.6195652-CDS-S-ischiensis_contig10:3566859..3567040Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3566860..3567040 -
1695739760.1902416-CDS-S-ischiensis_contig10:3566859..35670401695739760.1902416-CDS-S-ischiensis_contig10:3566859..3567040Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3566860..3567040 -
1622815544.6329346-CDS-S-ischiensis_contig10:3567889..35680001622815544.6329346-CDS-S-ischiensis_contig10:3567889..3568000Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3567890..3568000 -
1695739760.1984563-CDS-S-ischiensis_contig10:3567889..35680001695739760.1984563-CDS-S-ischiensis_contig10:3567889..3568000Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3567890..3568000 -
1622815544.6435215-CDS-S-ischiensis_contig10:3568849..35689391622815544.6435215-CDS-S-ischiensis_contig10:3568849..3568939Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3568850..3568939 -
1695739760.2073073-CDS-S-ischiensis_contig10:3568849..35689391695739760.2073073-CDS-S-ischiensis_contig10:3568849..3568939Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3568850..3568939 -
1622815544.6555617-CDS-S-ischiensis_contig10:3570182..35702561622815544.6555617-CDS-S-ischiensis_contig10:3570182..3570256Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3570183..3570256 -
1695739760.219914-CDS-S-ischiensis_contig10:3570182..35702561695739760.219914-CDS-S-ischiensis_contig10:3570182..3570256Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3570183..3570256 -
1622815544.6733973-CDS-S-ischiensis_contig10:3570962..35710141622815544.6733973-CDS-S-ischiensis_contig10:3570962..3571014Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3570963..3571014 -
1695739760.2284055-CDS-S-ischiensis_contig10:3570962..35710141695739760.2284055-CDS-S-ischiensis_contig10:3570962..3571014Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3570963..3571014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1662.1

>prot_S-ischiensis_contig10.1662.1 ID=prot_S-ischiensis_contig10.1662.1|Name=mRNA_S-ischiensis_contig10.1662.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=222bp
MQIPLVADPTKEIAADYGVLIEDKGIALRGLFIINPEGVLEQVTINGLSV
GRSVDECLRLIQAHQFVAEHGEVCPAEWKPGDRTMKGNLDGAMEYFSSGA
TEGETDPLQVGEHVVTISTPEQYREVISKGAAVVDFVAPHCGKCRQLLPF
VNELSEQHRNITFAKFDTTDEALSELADETGVKAIPAFRFFRDGKEFAPS
ITGYKKNMLRSTVEELSKAAA*
back to top

mRNA from alignment at S-ischiensis_contig10:3564306..3573149-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1662.1 ID=mRNA_S-ischiensis_contig10.1662.1|Name=mRNA_S-ischiensis_contig10.1662.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8844bp|location=Sequence derived from alignment at S-ischiensis_contig10:3564306..3573149- (Schizocladia ischiensis KU_0333)
GCGCCTCGGTGGTCCACCGCTCGTGTCCTGCTGCAGCTTTTGGCGCGCAG CTGCCGCGGAGTTTCCATGCCACAAGCCTTCGGTCGGAGATCTAGTGAGT GCTGTATAATTAACCACCATAAAGCATCGCACAGGTGCACTGCCGGCTAC GAATGTCTTCGCGTGCGCACTCCCTCCTGTTCCACAAATGCCCACACTGA TGCTGCAATAGCCACGTTTGTTGTGGAAAACATCACAGGAGGATGCATGA TCGTACTGCTGCGAAGTGCGCACGGAGTGTGCTGCATTGTGTGTGCATCT TTTATTGTTGTGTATTGCAGCGCATGAATTGTTCACATGACGCCGGGCTG GGCCGGTGGCCATTGACGTATGCGCGAGACTCACGAATTGTGCATACTTC GAAGTACTTCCCAATAACTACAAGTACACTGCAGGGTGTAAGCATGTGAA TACTGCCACATTGCGAAAGCACTGCGATTCGCCTGGCATAGAATTTCTCA ATCGTACTCCGACAAAGCGGGTCTTTGGTTCCTTCGTCTGTTCGGCGTAC ATACTGTTACTACATGACAAACAGTCAGATGGATGAACTCGCCCAGCATG CGACATTTCCCAGATTGGACCGTTTCCGGTGCGCGGACTCCTGCACCCCT AGGGGGCCTCATTATGTCGACCTGTCTACCCCTCTCTGTGCTTCTATACC TAAGTGAATTTAACAACACAGAGGAGTGTGTGCGTGCTCTCTCCTCTGTG TTGTGCATGTGTGTGTTTGTGCGTGCGAATGCTTTCGTGGGCAATCCCAT CATGCTGCCTGTGGCCCTGGACCGTGTCGCTGCATCATCACGACCCCAAC ACCCAGCCCCGGCCCTCCGGGGCTTGCCACACACGCCTCCTTACCTCGAA TGGGCAGAGGGCTGACCCCCCCCCACACCCGTTCCTGTCTACCCTGCGCA ACTCTCCCATTGCCAGCTACCCCGCCCCGTGCGCGACGATAGGCGAGGAA GCGCCGGGCTTCTCCACCAAGGCAGTTTCGGACAATGAAATCGTCGACAT TTCCTTGGAGCAGTACCGGGGGAAGTGGGCGGTGTTGCTCTTCTACCCTA AGGTGATGGAACTCGGCGAACAAAAGGCAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGGCCGGCTGTCGCCGCAACCCAATAGCGCGCAGTTGGCGGC AGACAATACCCCCAAGTTGGGGGGACCTGACCCGAGAGGAGGGAGAGAGG CAGGCTTGCCTTCAACGCAATGCCTGCGCTTTTGCGCAAGCTATTAGGGG CGCGGCCATGTGTGGCGGGAGGGAGGGGGGCCCGGTTCTACACGGTGTGC CTGTCCACCCCCGGCCCTGCGTTCCTGCCTGCGTGGTGTCAACCTGCCAC GCCGAAAGCTTTTAAGTGTAAAGTGAGCCTCGGCAGTGGGACGGCCGGGC AGGGTCGCGCACACGCCTTTTGCGGCGCCTGGGTGCTGCGGGTGGGTCTG GGCTGCGCCCCTCCTGCGGCGGCGCACGCGCACACGTGGCGCGCCGTGTG CTTGTGCAATCATGGTACGTCCCCCCACACGGTGCAAGGGCCGTTCACCT AGAGTAGGTACCGCACGTGCACGTGATGACCACGGCCACGCAAAAGTTCT CTGCCGCTACCCACCCACCCGACCTGCCAGTGTCCGTTCGTTGCGGCCGT GGTTTGCCCTCGCTTCCAAGTACTTGGTTGCACATTTTGCCATGTGCAGT TACTGCTGTACTTCGAAGAAACTTGCAGAAGTACTTACAAACTTCCGTGG CCCTTCTCCTGGTCAAGGGTGCGACCGGTCAACGAGTATCCAGGCTAATC TTACAGCTGTACCCGTAGAGCTCTCTGCAGGCGAGAGTGGTTTGCTGTCA CACCATCACATTGCCTGAGCCCCCCGCCCACCCGCCCGCTGGTCTCTGCC CGCCGATCAACCGCGCCACTGCACAGGACTGGACGTTTGTGTGCCCCACC GAGATCATCGCCTTCTCAGACAGGCACAAGGAGTTCGAGGACCTGGGCGC CCAGGTGCTGGCCATTTCGACGGACACCGAGGACAGCCACCTAGCCTGGG TGCGGCACCCGCGCAAGCGGGGCGGGCTGGGGCACATGCAGATCCCGCTG GTTGCGGACCCCACGAAGGAGATTGCCGCGGACTACGGTGAGCTGTCGTG TACTCGTACAGTACAGTAGATTGGTGGCCGATTTGGGCCCGGACTTGCGG GAATGGTTGTGCGACTCGGTCAGTAGTACTAGTGTTGGGCCTGCAAGAAC GGCCAGGCTCATGTAAAAGGCAAAATACGATATGTGATGACGCGTTCTGC CACGTTTAGTGTGGCGTATACCGTCTCGTGCTCACGCTTGTGTTTTGTTG AAACTCTCCTATGAAACTGCTTGGCCTCGGCGAATGCGTCGCGGAGGCGC CCACCGCCAGCTTTGGCCAACGCCTCCAGCCGTACACTACTCTCATATCC TTCCACGTGTGGCAAGTAGTATATATATGTACTCGTACGCATGTTGTGCT TGCCGTAGTCCCGAGAGCATGGACCACGCGCCTCGATCGAGACGGAGCAG GCCCCCTCCCTCCCCTGGCAGAGCCAGAGTGAGAGGGGGTGGCCACCCCA CCGCCAGAGGCGGAGGGGTGGCCAAGTCCATATCCCCTATTGCAAGTAGT ACACCTTAAAGCATATGTGTGTGTGTGGCGGGGCGGGGGCACAAGCGGCT GTGCTCCCCATCGCTGGGGGGTGGATTCCCGCCAATGGCCGCACCGCCGG GGTGCAGGAGCCGCACAGCTTGGGGTCACGTCGCCGGGGATAGCCGATGT GCCGTTTCGTTAACGCTGACCTCCTGGCGGCCCACCGCGTCAGGCGTGCT GATAGAGGACAAGGGCATCGCGCTCAGGGGCCTCTTCATCATCAACCCTG AGGGGGTACTAGAACAGGTGCGACCGCGTCCCGCCTCCACCGCTCGCATA ACTGCATGATGCAGTCAGCACTCTACGCCAGAGCTCTATGTAGCTCATCC CACGTAAACAGTGCTTGCACTACTGCGCCTCCACCGCTCGCATAACTGCA TGATGCAGTCAGCACTCTATGCCAGAGCTCGATGTAGCTCATCCCACGTA AACAGTGCTGGTACTACTGTACTGGCATCATTTTGGTCTCCCCTTCCCCC CACAAATTTCCCCTGGCGATCTATAAGGAAGGGCCACCGCTGAGGTCTTT AGTGACGTGGCCTGCACCTCACCCTGTGTTGTTCCTGTAAATGCTGGCAT CACTGCATGATGCAGTCAGTACACTATGCCAGAGCTGTACAGTACTTAGC TCACCCCACGCCATGCTTGCAGCGCTCGCATCACTGCATGATGCAGACTG TGCTCTGCACAGAGCCCTAGCTCATCCCACAACACACAAACACATGCTCA GCTACTGACTTGAAAGCAAGCTTGCGGTAGGCATCGCCGGTGGGGGCCGT GGCAGGGGCGCATACGCCCTGCTCGCGGGTCGTGGGCCTCGCCGTTTCGT TCTGCTCCGTTTCACGCGCTTGGGTCGCGCTGTTAACACCTCAACAGAGC AACAGCTAGGCCCAAGCGTTGACACCTCAACAGGACAACATCTTGGGTCC AGCGCGCCCCCTGGGGTGTGAAGAGAGTCATTGTTCTCCCCCCCCCCCCC CCTTTCCCCCTGCCCTCTTTCTGCCATGTATGATAGGCTAGAAGCAGTGC TCGGCAAAGGTTTTGAAGCTTGCAGTCAACTTGCTGTTGCGGGTCAGGCA GCTGCGTCGCATGGCGATAAAGATTTCGGTCCGAGAATGTGTAGGATTCA GTTGACAAGATTGTGAAGCATTTTCTGTCTTCTTTGTGGCAGCAAAGAAC GAACGGAGAAGTTCGCCTCAGCTGACCTCCCCAACAAGGAGAGGTTGGCT GTGGCCACCCCCCCCCAAAATACCAGAGGAAACAGTGCTCCGTCACGTAG GGTCACCTCGGTGGGACGCGTAGGTAGTCAATGGCCATATGACTATGGCA GGCAACTCACGAGTACCGCCTCTTTCCGTGAGAGTTGGGCAGTGCTCCGT CCCATGGGGTCTCTCCTGCGGGAGGGGTGGTCAGTGGCCGTAAGTACAGC TACGGCAAGCAAAGTAAGAGTATACGCCGCTCCCCTCACATCCGGCGGGT GGTGCACCAGGTGACCATCAATGGGCTGAGCGTCGGGAGGAGCGTGGACG AGTGTTTGCGGCTGATCCAGGCCCACCAGTTCGTGGCCGAGCATGGCGAG GTAAGGGGGGAGATGGGGTTGCGTTCGATTCGGGACGGCGGTGCCCTCAC CCGCCCGAGGCGGGGCCAGAGGCCAGGCTGGGCCAGGCCATGCTGCCACG CAACGGCGCTGGCACGGACACGTCCCCTTGAAGTATGCCCTTGAAATACA TGACGTGCTGCTTTTTTCGCTACAGTGTGCCTTTTTCCTGATGCGCACGG GGGTAACGAGTGCATCCCCGTTCGTCCTCGCCCGTACCTGTACCTTTCTC CCGCCCTCTCCGTGTGTTCGTGCGCCTACTGTGTGTTTGTGGTGCAGTGG GATGTATCTATCGTGCTTGGAAGTATTGTACCAGACTGGAGGCTGCTCGG CCTTCTGGCGCGCCGGCGAGGCCCCGTGCGAAGAAGTACTTCGAAGTACT TCCAAGTACTGTAGTAGCTTCCCCCCTCTGCGCGTACCGTGCAGCAGTGA TTCAAGTATTATTGCTAAAGTAGTAACGAGGTAAAATCGCACGTGTGTGA GATGGAGTGTTCTCATGCAGGCGTTGGAGTGGTTGTCACATAGGCATTGG AGTGGTTGTCACCTTTATGAAATCATAAAACATAATGGGCTGGCTACAAT GCACATGTGGGGACGGGGGGGGGTACAGTTGTATGCGTTAGATGCCACTC TGGTAAGTTACACCGAGTGAGGTGTACTACAGTGGTAATTGATCAAGCTC GATACACACAGCCTCCCTCGCCGGCTCCCCTCATGTCCCCACCCCCTTCC TCCCCGGGGGGTGGGGGGGGGGGGCATACAGCAGCGGATGCTGTTCTTCC TCCGAGACTTGCTTCCCCCGCCTTCCCCTTCCCCCGCCTGACGGGGCAGG TGTGCCCTGCCGAATGGAAGCCGGGAGACCGCACAATGAAGGGGAACCTG GACGGCGCCATGGAATACTTCTCCAGCGGCGCAACGGAGGGCGAGACCGA CCCGCTCCAGGTTGGTGAAGAGTGGGCGGGTGATGAGATGAGGGCACCGT AAGCGGGGCTGGAGGGCTGCAGGCATGGAAGGAAGGAGGGGGGGAAGGGA GGGAGGGAGGGAGGGAGGGACGGACGGACGGAGGGATGGAGGCAGAATCT GCACAGCTCAAAGACGACGGCACTACTTCTAGTAGTCCTCACTAGTGTTG AAGTACCAAGTACTAAGAGTACTTCCTTCGGTAAGTAGCACAGCAAGCAG TACGGGCTGAGCAATCAAGAGTTGCTTCTCCCCTGGCGTTGCAAGCACCG TCAAGGCAAGACTTTCCGCGGGCAACCAGCAGTGCCGCGCTACGAGTACA GTAGCTGCTGCATCCGTTACCCTCTGTATTTTTAAGCGCCGCGCTAGCTT GCGAGGGCAAGTCTGGAAGGATTTCGCCATGGTGAGAGCTTGTTTGTGCG CATCCCGGCTTGGGCCCTGCTGACTGCAGTGCTTTCCGTGAGAGAGCTCG TCTCGCAGTCAGTCACTGGCCCCGATCACAGCCTCACTGCGACCCGATGC TCTCGACCCTCCCTCGCGCTGTTGCCTACACACTGGTGGTGGGTGGTGGC GGTGGTGGTGGCGGCGGCGATGCTGATGATGGTGGTGGTGTTGGTGGTTG TGTTGTGGGTGTGCTGGTGGTGGTGGTGGTGATGGTGACGGTGTGGTGGT GGTGGTGGTGGTGGTGGTGGCGCCGGCGGCGGCGGCGGCGGTGGCGGCGG CGGCGGTATGTTCTGGGTGTGCTGTTGCTGCTTGTGGTGCTGACGGTGTT GGATGTGGTGATGATTGTGACGGTGTGGCGGGCGGTGGCGGGCCCCGGTC GGGGTACAGGTGGGGGAGCACGTGGTGACCATCTCCACGCCGGAGCAGTA CCGGGAGGTGATCAGCAAGGGCGCCGCCGTGGTCGACTTTGTCGCGCCAC ACTGCGGCAAGTGCCGCCAGCTCCTGCCCTTCGTGAACGAGCTCAGCGAG CAGCACAGGAACATCACGTTCGCCAAGTTTGACACCACAGGTATGGGTAA CCGCTTCAGCCGCTGGCAAGGGCTTTCGACGAGTTGGGCGGGTCTCTTTC AGCCGAGTGGGAGGTCCTCGTCTCTCTTGCCCCCGTTCTCCTCTCCTCCC CTCCTTCCGCCCCCCCCCCCCCCCCCCCCCCTTCCCTCCCATCCCCTCCC CTCGCCTTGCCTCGCCGCGCCTCCCCTCCCCTCAGCTGCCCTCCACTCCG CCGTCCGCCCCCTTCCCCCCGCCTCCCCTCACCTCCTCCCCTCTCTCCCT GGCCCTCCCAGTTGCCCGACTGGGGAACCGGTATTTGCTTGGCTTAGCTG TTGCTTCGAAGTGCTCACAGGACTAGTAGCGGAGACGCGGGCAAAGAGCT ATTCCCGGGGTTGACTGATTCACGGTGACACGGCGTGAAGAAGCACTTGG CACCCCCACTCCTTGCCATGGCAACCTGGCCAGACTTGTCTCTCTGTGCG CGTGCACAGCAGGTCCACCTCAAGTTTTGCGGCCAGGGGTCCGGGGGCAG GGGTGGACTGGTTGAGGGAGGGAGGGAGATAAGGAAGAGGGGGGACGAGG GGGTTAGAGAGGGAGGGAGGCCAAAGCGCACAGTCAGTCAAAACCACGTA GCCTGACAGCCCTGGACCCCCCCCCCGGCCGGCCGGCCTGGCCCCCTGTC CTGCCTCGGGGCCCCCGACCCCTCCCGCCGCCGCCCCCCTGGACTCCCGT GACTCATGGTTGCAATTGCACCCCTGACTGCGGCTGCTCGTGTCCGACTT TCCCGCTTGGGCAATGGTTTGTTTCGGCGTGGGCGGGGCTGGGCTGGCCC GGCCTGGGCTGGGCTGTGCGTCTGCAGACGAGGCGCTGTCGGAGCTGGCG GACGAGACGGGCGTGAAGGCCATCCCGGCCTTCCGCTTCTTCAGGGACGG GAAGGAGTTTGCGCCCTCCATCACGGGGTACAAGAAGAACATGCTGCGCT CCACGGTCGAGGAGCTCAGCAAGGCTGCCGCCTGATGTACTACTCGAGCA CAGTAGTGGTGCATAAGGTCGTAAAGTGCGCAAGTACATTTCAGAAGTGC GGCAGTAGCGTACCTGGACACAGCAGCAGCGGTACTGCGCGCAGGTTTCT TGGACGGGCGCACGCGCTCGCGCACTCGCATGCGTACGCGCGCGCGCGCA CACACAAACCAGCACCAGCAGCATGATGGCTCAGCGGAGCACACACACAA AGAACGGTACTTTCTGCTTCGTACTACATATAGTAATACTTCGGAACTAC TGTAGTAGGTATGTATTGTAGTGTATGCAAGATTTTATGCTTTGTGTTCC AGCAGTGAACTTGGAACCGACGGGGCACGCATGAGTTCGGGCTGCTGGCT CCGGTGCCGCCAGTGCTCAGAACTTGAGTGCCCCGCCGTGGCCCACAACG TTGGCGTGTGCGGATCATGACCGGGTGAGCAGGGGTTGCACACTGGCAGC TCACAGCGATGTTGACGGAAACTTACCCGGAGGTAGCGGCACCTGCAGTA TTTGGGTGTTGAGCTTTTACGTATTTTCGGAGTGCATGGCAGTAGCTGAT CATGATAGGACCGGGGGTTGGGGTTGCAATCTGCGAGTCACTGAGTGGAC CCTTGTGGACCTGGTATGGTTTGCAAACGTGTGTACTCGTACTTTGAAGT ACTTAGTTGGACTGCAGTAGACTTGGGGCCACGCAGGGCGTTCGGGCGTA GCTTCGGCCAAGCGGTGCCGTCAGTGCATGCAAGTTGAAGCACTTGGGAG TCCTACGAGGTTCAACTTACAGTTCATGAACAGACGAAGCACACCCTGGC CTGGGTGCTACTACTGTACAGTGCTGTGATGCAGTGGTGCCCGCCTACTA CCTCCAAGGCTACCGTGACCATGCGGTGGATTGTACTTGCAACCGTGACT ATTACTATTCCGCCCAACCATGTGTGTTTAGACGGTACCTTGCAGTACTA CTCGACGTGTGCCACGTGCGTTCAGGTTAAATCAATACTGCGGTGCTGGT CAGCCGAACAGGTTTACAATTATTGTACTTCGTCGTCCGTGCATAACCGT GACGATGCTCATCAGTGCGCCCGTTGGCCACGGGCGAGGTATCGACTATT GTGCCATCATTACTCGCGCTGTCACGGCGTAGGTGTCTGGTTGCCTGCAA TGTCGTAAGACTGTACTCGAGCACGAGAGTCGTGCTACGATTGGGGGGGG TCGTTTGTTGCACAATTTCTTCGGCCAGAGCCATCCACGAAAGCGGCATT GTTTCACCCCCAACAATGGGATGAGTGTCAGTGATTTGCTGCCCCGTATC CTTACCAGGAGGACCCTCCCATGCAATTTTGGGAGACTGCTGGTGAGTGG AAGCTTCCGAAAATGGCTTCCGAGTACTCAGCGGGGTGGGCTGTTTGGCC GAACACCCCTGCAACAAGGGGGTCATATTGGCCCCCGCCCAATCGTAGCA GGACTCACGAGTACTTGCACTTCGAAGTACGAAGTACTTCAATAGTTGCC ACCCAATGGTGCAGGGGTAATTGAAGACTGATGCCGCAACAGTG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig10:3564306..3573149-

>mRNA_S-ischiensis_contig10.1662.1 ID=mRNA_S-ischiensis_contig10.1662.1|Name=mRNA_S-ischiensis_contig10.1662.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1332bp|location=Sequence derived from alignment at S-ischiensis_contig10:3564306..3573149- (Schizocladia ischiensis KU_0333)
ATGCAGATCCCGCTGGTTGCGGACCCCACGAAGGAGATTGCCGCGGACTA
CGATGCAGATCCCGCTGGTTGCGGACCCCACGAAGGAGATTGCCGCGGAC
TACGGCGTGCTGATAGAGGACAAGGGCATCGCGCTCAGGGGCCTCTTCAT
CATCAACCCTGAGGGGGTACTAGAACAGGCGTGCTGATAGAGGACAAGGG
CATCGCGCTCAGGGGCCTCTTCATCATCAACCCTGAGGGGGTACTAGAAC
AGGTGACCATCAATGGGCTGAGCGTCGGGAGGAGCGTGGACGAGTGTTTG
CGGCTGATCCAGGCCCACCAGTTCGTGGCCGAGCATGGCGAGGTGACCAT
CAATGGGCTGAGCGTCGGGAGGAGCGTGGACGAGTGTTTGCGGCTGATCC
AGGCCCACCAGTTCGTGGCCGAGCATGGCGAGGTGTGCCCTGCCGAATGG
AAGCCGGGAGACCGCACAATGAAGGGGAACCTGGACGGCGCCATGGAATA
CTTCTCCAGCGGCGCAACGGAGGGCGAGACCGACCCGCTCCAGGTGTGCC
CTGCCGAATGGAAGCCGGGAGACCGCACAATGAAGGGGAACCTGGACGGC
GCCATGGAATACTTCTCCAGCGGCGCAACGGAGGGCGAGACCGACCCGCT
CCAGGTGGGGGAGCACGTGGTGACCATCTCCACGCCGGAGCAGTACCGGG
AGGTGATCAGCAAGGGCGCCGCCGTGGTCGACTTTGTCGCGCCACACTGC
GGCAAGTGCCGCCAGCTCCTGCCCTTCGTGAACGAGCTCAGCGAGCAGCA
CAGGAACATCACGTTCGCCAAGTTTGACACCACAGGTGGGGGAGCACGTG
GTGACCATCTCCACGCCGGAGCAGTACCGGGAGGTGATCAGCAAGGGCGC
CGCCGTGGTCGACTTTGTCGCGCCACACTGCGGCAAGTGCCGCCAGCTCC
TGCCCTTCGTGAACGAGCTCAGCGAGCAGCACAGGAACATCACGTTCGCC
AAGTTTGACACCACAGACGAGGCGCTGTCGGAGCTGGCGGACGAGACGGG
CGTGAAGGCCATCCCGGCCTTCCGCTTCTTCAGGGACGGGAAGGAGTTTG
CGCCCTCCATCACGGGGTACAAGAAGAACATGCTGCGCTCCACGGTCGAG
GAGCTCAGCAAGGCTGCCGCCTGAACGAGGCGCTGTCGGAGCTGGCGGAC
GAGACGGGCGTGAAGGCCATCCCGGCCTTCCGCTTCTTCAGGGACGGGAA
GGAGTTTGCGCCCTCCATCACGGGGTACAAGAAGAACATGCTGCGCTCCA
CGGTCGAGGAGCTCAGCAAGGCTGCCGCCTGA
back to top