mRNA_S-ischiensis_contig10.1646.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A6H5KJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ37_9PHAE) HSP 1 Score: 348 bits (894), Expect = 3.790e-113 Identity = 189/380 (49.74%), Postives = 232/380 (61.05%), Query Frame = 1
Query: 235 EDGAI---PDAVGRRAPSGVPQAKWDRLAREAQGIWRETEALHPSPSHTLEHVVVTVLRALRNNDRPYRDRGCEVAIRFSARTNPASEMTPSAMRAYLSDPGLPFYGIFKVWDEMDSTREPQIEDGG-ERAYQQVLLKRGEDESWSTVNFDMVSEDRCWLIERLWVDDKS--------GRRPSPRRGPGP----DIFAEDKLEVMGCKFSDYKPEDLVS-----WLETDPRDSFSPKLVALNCLAGLRRSTWKSGCWQSTQDS--SGLTHHPPPRCRCALRAKDV-PSKNHGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEEVSEDGASADLVVLLRRSGEEEWTSVNWELGKYRNKWLTEKIW 1302
ED +I PD +G AP GV KW+R+ R A RET L P+P H HV L+ALR D PY + GCE+AIRFS+ +NPAS TP MR Y+ DP +PFY + WDEM +I+ +RA QQV +++ D +WSTV+ D+V ED CWLIERLW+DD+S GR SP P P ++F ED+LE+M CK++DY L + WLE P S SPK VAL C+ LR++ SG +T DS G AK P N GCE IRFCSP NVASTLTPAHFAQYL EPWY+IF W+EL+FHSE++SED ++ADLVVLLR EE WTSVNWEL K WLTE+IW
Sbjct: 77 EDASIYSFPDTLGESAPVGVSPEKWERVLRSA----RETTLLSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPVGGAEIDVAEPDRANQQVRVRKEGDPAWSTVSLDLVKEDGCWLIERLWIDDRSVAGGRAGGGREASPXX-PAPLSVAELFDEDRLEMMSCKYADYDSACLAAAGGGDWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDDSRRDGEAAGGDAAATAGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNKWDELSFHSEDISEDESTADLVVLLRPDNEEAWTSVNWELVKCDGMWLTERIW 451
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A836CF69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF69_9STRA) HSP 1 Score: 273 bits (697), Expect = 5.040e-86 Identity = 143/301 (47.51%), Postives = 167/301 (55.48%), Query Frame = 1
Query: 505 MRAYLSDPGLPFYGIFKVWDEMDS--------------------TREPQIEDGGERAYQQVLLKRGEDESWSTVNFDMVSEDRCWLIERLWVDDKSGRRPSPRRGPGP---------------DIFAEDKLEVMGCKFSDYKPEDLVSWLETDPRDSFSPKLVALNCLAGLRRSTWKSGCWQSTQDSSGLTHHPPPRCRCALRAKDVPSKNHGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEEVSEDGASADLVVLLRRSGEEEWTSVNWELGKYRNKWLTEKIW 1302
MR YLSDP LPFY I WDEMD+ + D + AYQ VL++R D +WSTVN M E CWLI+RLWVDD+S PS R G + A+ E MGC+F DY P LVSWLE DP + SPK+V LNCL CALRAKD+P +N GC LTIRFCSPNN ASTLTPAHFA YL EPWY I W E+ FHSEE++ DG+ ADLVVLL+R G+ EWTS+NW LG+Y WLTE+IW
Sbjct: 1 MRRYLSDPALPFYRILAEWDEMDTRGGGLSLSASIDPTSTSTSTNGDAPTADAADSAYQAVLVRRTGDSTWSTVNLQMSREHGCWLIDRLWVDDQSVD-PSARAAGGAVXXXXXXXXXXXXXXXMLADAANEAMGCRFGDYDPVQLVSWLEQDPSEELSPKMVVLNCL-------------------------------CALRAKDIPHRNAGCALTIRFCSPNNAASTLTPAHFAAYLEEPWYQIIAQWSEMAFHSEEMNADGSEADLVVLLKRQGDAEWTSMNWLLGRYDGLWLTERIW 269
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: D8LGZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ2_ECTSI) HSP 1 Score: 260 bits (665), Expect = 6.020e-81 Identity = 140/288 (48.61%), Postives = 170/288 (59.03%), Query Frame = 1
Query: 505 MRAYLSDPGLPFYGIFKVWDEMDSTREPQIEDGGE-RAYQQVLLKRGEDESWSTVNFDMVSEDRCWLIERLWVDDKS--GRRPSPRRGPGP---------DIFAEDKLEVMGCKFSDYKPEDLVS-----WLETDPRDSFSPKLVALNCLAGLRRSTWKSGCWQSTQDSSGLTHHPPPRCRCALR----AKDV-PSKNHGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEEVSEDGASADLVVLLRRSGEEEWTSVNWELGKYRNKWLTEKIW 1302
MR Y+ DP +PFY + WDEM +I+ RA QQV +++ D +WSTV+ D V ED CWLIERLW+DDKS G R ++F ED+LE+M CK++DY P L + WLE P S SPK VAL C+ LR++ SG +T D AK P N GCE IRFCSP NVASTLTPAHFAQYL EPWY+IF W+EL+FHSE++SED ++ADLVVLLR EE WTSVNWEL K WLTE+IW
Sbjct: 1 MRTYIDDPSMPFYRVLSDWDEMAPVGGAEIDVADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSVAGGRSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADYDPACLAAEGGGEWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDDXXXXXXXXXXXXXXGATTGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTADLVVLLRPDNEEAWTSVNWELVKCDGMWLTERIW 288
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A7S2XYB1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYB1_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.590e-28 Identity = 65/158 (41.14%), Postives = 100/158 (63.29%), Query Frame = 1
Query: 274 PSGVPQAKWDRLAREAQGIWRETEALHPSPSHTLEHVVVTVLRALRNNDRPYRDRGCEVAIRFSARTNPASEMTPSAMRAYLSDPGLPFYGIFKVWDEMDSTRE---PQIED-----GGERAYQQVLLKRGEDESWSTVNFDMVSEDRCWLIERLWVD 723
PSG+ Q WDR++R A+ W++ +A PS + T V V VL+ALRNN + +GC+VAIRF + NPASEM P + AYL+D +P Y I W+++D++ + ++E+ G + QQV ++R ++ WS VNF+ V E+ WLI++LWV+
Sbjct: 16 PSGMKQEDWDRISRNAKAKWKKFQAEQPSSTQTPREVAVIVLKALRNNHYSDQHQGCQVAIRFCSSENPASEMMPEDLAAYLADDRMP-YAIMCEWEDIDASADGDCSEVENMRRVPDGTQCQQQVFVRRLGEKGWSAVNFEFVRENSEWLIKQLWVN 172
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A7S3BX45_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BX45_9EUKA) HSP 1 Score: 112 bits (280), Expect = 3.760e-24 Identity = 83/276 (30.07%), Postives = 126/276 (45.65%), Query Frame = 1
Query: 358 SPSHTLEHVVVTVLRAL--RNNDRPYRDRGCEVAIRFSARTNPASEMTPSAMRAYLSDPGLPFYGIFKVWDEMDSTREPQIEDGGERAYQQVLLKRGEDESWSTVNFDMVSEDRCWLIERLWVDDKSGRRPSPRRGPGPDIFAEDKLEVMGCKFSDYKPEDLVSWLETDPRDSFSPKLVALNCLAGLRRSTWKSGCW-QSTQDSSGLTHHPPPRCRCALRAKDVPSKNHGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEE 1176
SP V+ ++ AL RN D P GCEVA+RF A +NPAS++TP+ YL P +Y W E + G AYQQ+ ++ W+++ W++ R+ + KS G G + AE V S + E +++ +P D+ +P + + + RS + + + + L + A+R D P HGCE+ IRFC+P N AS L+P FAQYL EPWY I +W+ + EE
Sbjct: 55 SPDREPREVIAILMSALHKRNLDSPRARFGCEVALRFLAPSNPASQVTPAVFAEYLEQP---WYQNLLEWSEYRWDGGLTVLRDGTEAYQQIGVRSSPTAEWASIR---------WILVRVPIYGKS------LSGAG--LEAEAGASVGAVMDSQWMLEAVIA---EEPDDASAPLVAGIPLASAEARSGRAAAVLGEPCETPAALVM----QVMTAIRRMDDPYPLHGCEVAIRFCAPTNRASRLSPEAFAQYLREPWYLILTEWDAIQIGDEE 303
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A8J5XX53_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XX53_DIALT) HSP 1 Score: 94.7 bits (234), Expect = 1.760e-19 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 1
Query: 295 KWDRLAREAQGIWRETEALHPSPSHTLEHVVVTVLRALRNNDRPYRDRGCEVAIRFSARTNPASEMTPSAMRAYLSDPGLPFYGIFKVWDEMDSTREPQIEDGGERAYQQVLLKRGEDESWSTVNFDMVSEDRCWLIERL 714
+W AQ + E + PS + + V++ VL ALR D PY D G ++AI SA +N AS+++P YLS+ Y IF WDEM+ E QI G+RAYQ+VL++R D SW+ +N+ +V W+ E +
Sbjct: 16 RWTATDEPAQALPAE---VLPSTARSPRDVIMLVLNALRRPDEPYDDYGPQLAIAHSAPSNGASQLSPVQFAKYLSEES---YVIFSEWDEMEIEDELQIAADGQRAYQEVLVRRANDASWTHINWTLVKHAGMWMTESV 149
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A7S0JII3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JII3_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 1.110e-18 Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 1000 ALRAKDVPSKNHGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEEVSEDG-----------ASADLVVLLRRSGEEEWTSVNWELGKYRNKWLTEKI 1299
ALR + P HG E+ +R+CSP N AS L+P FA YL EPWY I W+EL +E + + AD+ VL+R G++ WT VNW+L ++ +WLT+ +
Sbjct: 61 ALRHANEPYPFHGAEVAVRYCSPTNKASLLSPQVFAAYLKEPWYEILTAWDELDMDEDEDDVEANLAERWEQLRTSLADIDVLVRVRGDDSWTVVNWKLSRHNGRWLTDAL 171
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A7S2NRG0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NRG0_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 2.380e-18 Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 1000 ALRAKDVPSKNHGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEEVSEDGASA-------------DLVVLLRRSGEEEWTSVNWELGKYRNKWLTEKI 1299
ALR D P HG E+ +RFCSP N AS L+P FA YL+EPWY+I +W+E+ ++ ED +A ++ L+RR GE WT VNWEL ++ +WLT+ +
Sbjct: 325 ALRNVDEPYPLHGAEVAVRFCSPTNKASQLSPQAFATYLNEPWYAILTEWDEMQIDEDDEEEDVEAALARRWDELRLNVAEVGTLVRRKGE-PWTVVNWELSRHNGRWLTDSL 436
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A7S0JKP0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKP0_9EUKA) HSP 1 Score: 87.0 bits (214), Expect = 3.450e-17 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 1033 HGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEE-----------------VSEDGASADLVVLLRRSGEEEWTSVNWELGKYRNKWLTEKI 1299
HG E+ IRFCSP N AS L+P FAQYL EPWY I +W+E+ + ++ + VL++R+ +E WT VNW+L ++ +WLT+ +
Sbjct: 2 HGAEVAIRFCSPTNAASRLSPRGFAQYLREPWYRILTEWDEMVLDDGDEXXXXXXXXXXXXXXXXXXDESTVVEQSVLVKRTVDESWTVVNWQLSRHSGRWLTDAL 107
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Match: A0A7S0EJH6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EJH6_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 9.170e-16 Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 1003 LRAKDVPSKNHGCELTIRFCSPNNVASTLTPAHFAQYLSEPWYSIFGDWEELTFHSEE-VSEDGASADLVVLLRRSGEEEWTSVNWELGKYRNKWLTEKI 1299
+R D P NHG L++R+CSP N AS+LTP F YL EPWY + +W E+ EE + G +A++ V RR ++ ++ V++ L ++ +WL + +
Sbjct: 48 MRRPDEPYLNHGAALSVRYCSPTNGASSLTPEAFKGYLREPWYKLLLEWNEMELDDEEDIDSAGNTAEVDVQCRRDADDSFSIVSFRLSRHNARWLIDSL 147 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1646.1 >prot_S-ischiensis_contig10.1646.1 ID=prot_S-ischiensis_contig10.1646.1|Name=mRNA_S-ischiensis_contig10.1646.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=435bp NPAASCSLPFPIAYRRGSAMPTRGRFAAVALLPLLCGVHAFRGCLSPNCPback to top mRNA from alignment at S-ischiensis_contig10:3403928..3413437+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1646.1 ID=mRNA_S-ischiensis_contig10.1646.1|Name=mRNA_S-ischiensis_contig10.1646.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9510bp|location=Sequence derived from alignment at S-ischiensis_contig10:3403928..3413437+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3403928..3413437+ >mRNA_S-ischiensis_contig10.1646.1 ID=mRNA_S-ischiensis_contig10.1646.1|Name=mRNA_S-ischiensis_contig10.1646.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2610bp|location=Sequence derived from alignment at S-ischiensis_contig10:3403928..3413437+ (Schizocladia ischiensis KU_0333)back to top |