mRNA_S-ischiensis_contig10.1619.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1619.1
Unique NamemRNA_S-ischiensis_contig10.1619.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 2.060e-99
Identity = 177/293 (60.41%), Postives = 228/293 (77.82%), Query Frame = 3
Query:   63 MPANMDHQLDILLSELYNIQKDVGGPEGDKPA--KKKGGEKEDKFNMLKTQIIAKLGATCDMLSKEPSSKDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVVGASARPAYYG-GAGGPSEGFSRKDSRAGG-AAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEVRSADKFCVDVMCILMLLGMVAVLYALIKSN 929
            M  + D +LDILLS+L  IQ  VGG + ++    KK+  +++D+FN +K+ II +LG TCD+L+KEP+SKDP AVIQ+   +++NLRALEE WK++D  YQ E+ KRRSK+T+EE+E +RQLLVD+RHEIGELK I QAGVVGA       G G   P+  F ++++R GG  AV +A P G+LT EQ  R+QQIRDR+ EMEDKYL+VVEE V RLG++A++I EEL +QDRMVDDLGNR+DTAQEHV NVN RMKEVLK VRSADKFC+D+MCIL+LLGM+AVLYA++K  
Sbjct:    1 MAPSTDRELDILLSKLRKIQAAVGGSDEERALRRKKRKSKEDDRFNAVKSAIIKRLGDTCDLLAKEPASKDPTAVIQKKNAVQSNLRALEENWKQLDSAYQAEKSKRRSKITREELENQRQLLVDLRHEIGELKSIHQAGVVGAKGGGTRGGYGTAMPASEFFKQEARTGGMTAVAEAPPPGKLTPEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.300e-80
Identity = 162/308 (52.60%), Postives = 213/308 (69.16%), Query Frame = 3
Query:   63 MPANMDHQLDILLSELYNIQKDVGGPEGDKPAKKKGGEKEDKFNMLKTQIIAKLGATCDMLSKEP---------SSKDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVVGAS---ARPAYYGGAGGPSEGFSRKDSRA-------GGAAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEVRSADKFCVDVMCILMLLGMVAVLYALIKSN 929
            MPA MD +LD+LL +L  I   VGG + +   KKK   K+D+FN++K  ++ +L  TC+++ K           S+ DPKAVI+RNQDIR+NLR LE EW EMD ++Q ER KRRSK+T+EEMEARRQLLVD++ EI ELK + Q   VGAS   A  AY          F  +DS A       GGA V   RPA  L+ EQ +R+QQIR+R  EME+ YLS +EE V RLGD+AR + EEL+LQ+RM+DDLGNR+++ QE + NVN RMK+ LK+VR+ADKFCVD+MC+L++LG+ AVLYA+IK+ 
Sbjct:    1 MPAGMDRELDVLLMKLQKILLSVGGDDLESGGKKKS-SKDDRFNLVKASVMRRLTETCELMEKAAATSGGGLASSTADPKAVIKRNQDIRSNLRTLEAEWGEMDVMFQAERTKRRSKMTKEEMEARRQLLVDLQREIAELKALNQQAAVGASVGVASSAYAA--------FKPQDSAAALAGGAKGGAEV---RPAN-LSNEQHYRIQQIRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKNG 295          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: B8LD27_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD27_THAPS)

HSP 1 Score: 138 bits (348), Expect = 6.250e-32
Identity = 105/308 (34.09%), Postives = 170/308 (55.19%), Query Frame = 3
Query:   63 MPANMDHQLDILLSELYNIQKDVGGPEG----DKPAK------------KKGGEKEDKFNMLKTQIIAKLGATCDMLSKEPSSK--DPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVVGASARPAYYG-----GAGGPSEGFSRKDSRAGGAAVQDARPAGQ-LTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEV-RSADKFCVDVMCILMLLGMVAVLY 911
            +P+  D +L +LL++LY+IQ+ VG  E     DK ++            KKG +K  +F  LK+ I+ +L +   ++ ++ +SK  +PK  I    +IR  +R   +EW E++ +Y+ E  K++SK T EE+E ++ L++ +  EI ++K     G    S      G     GA    +         G +    + P+G  LT  QQ ++QQIRDR AE  D+ L  + E +  L ++A+   EE+  Q+ M++ +GN++D A EH+ NVN +MK+ L EV RS+DK CVD+MCIL+ +G  AV Y
Sbjct:   54 VPSKQDEELTLLLTKLYDIQEQVGAKEKSSKEDKLSRAQQAGQVVMGKGKKGQKKGSRFLELKSNIVDRLKSVHSLIEEQSNSKRNNPKEAIAAQAEIRELIRQASDEWSELNELYKKEARKKKSKFTSEELELQQALVMQLNVEIEKVKEAQLQGYANRSGNGMDEGVRLNLGALAALDAVDISSGGEGNSKAWQSGPSGTALTGSQQVQLQQIRDRDAEF-DQDLDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFY 360          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: K0SY08_THAOC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SY08_THAOC)

HSP 1 Score: 135 bits (339), Expect = 3.200e-31
Identity = 107/312 (34.29%), Postives = 167/312 (53.53%), Query Frame = 3
Query:   63 MPANMDHQLDILLSELYNIQKDVGGPEGDKPAKKK----------------GGEKEDKFNMLKTQIIAKLGATCDMLSKEPS--SKDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVV--GASARPAYYG-GAGGPSEG--FSRKDSRAGGAAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEV-RSADKFCVDVMCILMLLGMVAVLYALIKS 926
            M A    +L+ LL++LY IQ+ VG  E     +KK                G +K  +F  LK+ I+A L     ++ ++ +  S +PK  I    +IR  +R   +EW E++ +Y+ E  K++SK T+EE+E ++ L++ ++ EI ++K   Q G    GA+ + +    GA    +    S  D   GG A Q       LT  QQ ++Q I+DR AE  DK L  + + +  L ++A    EE+  Q+ M+     R+D AQEH+ NVN +MK+ L EV RS+DK CVD+MCI+M++G  AV Y L K+
Sbjct:    1 MAAKQQEELNNLLTKLYTIQEQVGAKEKTTDDEKKQRAADAGHISMGKGRKGQKKGSRFLELKSNIVAGLKNVHSLIEQQSNAVSLNPKDSITAQAEIREVIRQASDEWNELNEIYKKEARKKKSKFTEEELEVQQALVMQLKQEIDKVKDAQQGGYARGGATLQNSQLNLGALAALDAADLSSNDPSGGGRAWQSGTGGTALTGNQQVQLQAIQDRDAEF-DKDLDEIGDGIQDLHELALRQGEEVRRQNEMLKGTEQRMDQAQEHMTNVNAKMKDTLNEVGRSSDKLCVDIMCIVMMMGFAAVFYQLSKT 311          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: W7UCC1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCC1_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.830e-29
Identity = 100/293 (34.13%), Postives = 163/293 (55.63%), Query Frame = 3
Query:   69 ANMDHQLDILLSELYNIQKDVGGPEGDKPAKKKGGEKEDKFNMLKTQIIAKLGATCDMLSKEPSSKD-----PKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVVGASARPAYYGGAGGPSEGFSRKDSRAGGAAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEV-RSADKFCVDVMCILMLLGMVAVLYALIKSN 929
            + +D +L+ LL  L +IQ+ VGG    K   K+GG K DKF  LK  +IA++    ++++   S        PK VI  N  IR ++R L+E+ KE+D ++Q ER KR+SK + EE+E R +++  +  EI ELK +  AG +          G   P E         G   +Q       +T+  Q ++QQI+ R  +++ +YL  +E+ V  L D+A   NE +   + M+++L  ++   Q+H+  VN +MK  L +V R +DK C+DV+CI++LLGM+ V+Y L K++
Sbjct:   50 SRVDAELETLLGVLDDIQRAVGGKV--KKITKEGG-KVDKFMDLKQTMIARMIDVQELIASTKSQTSGQEMQPKDVIATNAQIREHIRQLKEDSKELDRLFQKERNKRKSKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNNTPGAVGLFAPVEESDAFRGPIGMLPMQT-----DMTESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNS 334          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: A0A7S1BK55_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BK55_9STRA)

HSP 1 Score: 125 bits (314), Expect = 7.700e-28
Identity = 109/319 (34.17%), Postives = 167/319 (52.35%), Query Frame = 3
Query:   75 MDHQLDILLSELYNIQKDVGGPEGDKPAKKKGGE----------KEDKFNMLKTQIIAKLGATCDMLSKE-----PSSKDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELK----GIFQAGVVGASARPAYYGGAGGPSEGFSRKDSRAGGAAVQDARPAGQ--------------LTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEVRS-ADKFCVDVMCILMLLGMVAVLYALIKSN 929
            +D +L+ +L  L+ IQKDVGG E  +   +K             K  KF  LK+ II  +     +  KE      S  +PKAVIQ   ++R +L+ L++EWK++DG+Y+ E  KRRSK T EE+E ++Q++  ++ EI +L+    G F A    +SA PA    +    E      S  GG +      AGQ              +T  QQ ++ QI+ R  E  DK +  + E +  L ++A + NEE+  Q+ M+D LGNR+D  QE V +VN RMKE L+ V     K CVD+MC+++ + +  VL ++I + 
Sbjct:    7 IDKELNDVLRVLHEIQKDVGGVEDARKRAEKXXXXXXXXXXXXAKGSKFLALKSDIIDHVQDIRALQEKEGLMEAASGVNPKAVIQIQHEVRQHLKDLDDEWKQLDGMYRTEVNKRRSKFTTEELEMQQQMIFQLQREIYQLREAERGAFAA--ASSSAAPAINAKS---IESVIGGGSNVGGKSPLWQAAAGQERNRIEGGGGGQVEMTSYQQQQLDQIQMRDNEF-DKDIEQIGEGIKDLQEIALAANEEVNRQNVMIDSLGNRIDGVQERVISVNQRMKETLRSVGGRGSKLCVDIMCVMLSVVIGLVLLSMILNK 319          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: A0A7S0BZ32_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZ32_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.180e-27
Identity = 92/281 (32.74%), Postives = 153/281 (54.45%), Query Frame = 3
Query:  162 KKGGEKEDKFNMLKTQIIAKLGATCDMLSKEP----------SSKDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAG-----------VVGASARPAYYGGAGGPSEGFSRKDSRAG---GAAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEV-RSADKFCVDVMCILMLLGMVAVLYALIKSN 929
            KK  +K  +F  LK+ +I +L    ++L ++           S  +PK VI     IR ++R++ EEW EMD +Y++E  K+RSK ++ E+E ++ L++ ++ EI +++ + Q G            +   A  A        +  FS   S+A    GA      P  +LT +Q+ +++QI  R AE  D+ L ++ + +  L ++A    EE+  Q+ M++ +G ++D   +H+ NVN+RMKE L EV RSADK CVD+MCI + LG  AV Y +IK+ 
Sbjct:   26 KKAEKKGMRFLELKSSVIDQLKTVHELLGEQEKRNTGKISVASGNNPKDVIAAQATIREHIRSMHEEWSEMDTLYKNEARKKRSKFSESELEIQQTLVLRLQDEIEKVREVQQRGFMKSPGETVAVALNTKALAALQ------ATDFSSTTSKANDWSGAGGGVGGPEAELTDQQRLQMEQIDKRDAEF-DQDLDIIGQGIQDLSEIAALQGEEVKRQNVMLESVGKKIDNVNDHLGNVNSRMKETLDEVGRSADKLCVDIMCIALALGFAAVFYRIIKAT 299          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.900e-27
Identity = 90/302 (29.80%), Postives = 159/302 (52.65%), Query Frame = 3
Query:   75 MDHQLDILLSELYNIQKDVGGPEGDKPAKKKGGE-------KEDKFNMLKTQIIAKLGATCDMLSKEPSSKDPKAV-----IQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVVG-----ASARPAYYGGAGGPSEGFSRKDSRAGG-AAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEVRSADKFCVDVMCILMLLGMVAVLYALIKS 926
            +D ++   L  LY IQ  VGG    KP      E       + D F + K +I+ +L  T + +     ++   AV     I++ Q++R   + L ++W+E+  +   E  K++SK T EE+ +R  ++ DI+  +  LK  F A   G     +   P++            ++ + +GG  A        +++ +Q  R+ QI+    EM DK + ++ E V  LG +A+ +NEEL +Q +M+D+L   V+ AQEHV N+N ++ + LK+VR +DK C+D++C+L+LLG++ V+  L +S
Sbjct:   20 LDLEIQTCLDTLYRIQAVVGG----KPTSTAATEAVIAEQFQNDAFMLTKHRIMVRLADTEERVEDCIRTRTENAVAQDVKIRKQQEVRARFKDLTKDWEELSALLSKETSKKKSKFTAEEIRSRTAIVRDIKDHLDTLKAQFTASYSGVQMDASQTLPSFAS----LKRSIDQQSASSGGQGAASVVVEQERISSQQNQRLAQIQATDREM-DKTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVMIQLARS 312          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: A0A7S3PYZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYZ1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 6.580e-27
Identity = 105/336 (31.25%), Postives = 161/336 (47.92%), Query Frame = 3
Query:   78 DHQLDILLSELYNIQKDVGGPEGDKPAKKKG-------------GEKEDK----FNMLKTQIIAKLGATCDMLSKEPS--------------SKDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAG---------------------VVGASARPAYYGGAGGPSEGFSRKDSRAGGAAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEVRSADKFCVDVMCILMLLGMVAVLYALIKSN 929
            D +L  LL++LY+IQ+ VG       A K+              G K  K    F  LK+ I+ +L     +L +E                  +PK VI R   +R  +R   EEW+E+D +Y++E  KR+SK TQEE++ ++ L+  +  E+ + K +   G                     ++       + GG GG + G             QD     +LTQ+Q  ++QQI DR  E  D+ L  + E +  L ++A         Q+ M  ++G ++D AQEH+  VNT+MK+ L EVR+ADK CVDVMCI++++GM AVLY +I S 
Sbjct:    7 DKELLELLTKLYDIQETVGSKPKTSTADKRNRAENGGGNNTMGKGRKAKKAGSRFLELKSSIVERLRTLQKLLEEEDERNRGGTGLNFAVAHGNNPKEVIARQAAMREEIRMATEEWEELDSLYRNEARKRKSKFTQEELDFQQTLVQRLGAELEKAKSLQGKGYARIGTGRDSDAAVLNTQALNIIDMDDGDGFLGGGGGSALGNXXXXXX-----XQD-NGGVELTQQQHLQLQQINDRDKEF-DQELDQIGEGIQDLSELAXXXXXXXXRQNVMXXNVGQKIDDAQEHLSTVNTKMKDTLNEVRAADKICVDVMCIVLMVGMAAVLYKMIASG 335          
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Match: A0A7S2XIT6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIT6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.290e-26
Identity = 98/310 (31.61%), Postives = 163/310 (52.58%), Query Frame = 3
Query:   84 QLDILLSELYNIQKDVGGP----EGDKPAKKK-------GGEKED-----KFNMLKTQIIAKL----GATCDMLSKEPSS-----KDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQHERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVVGASARPAYYGGAGGPSEGFSRKD-----SRAGGAAVQDARPAGQLTQEQQFRVQQIRDRQAEMEDKYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNTRMKEVLKEV-RSADKFCVDVMCILMLLGMVAVLYALI 920
            +L  LL++LY +Q+D G      E +K AK +       GG K+      +F  LK+ I+ +L    G   D   KE S       + K  I     +R  +R   +EWKE++ +Y++E  K+RSK T +E+E ++ L++ ++ EI + K   Q    G   R    G     +  F   +     +  G    +       LT  QQ ++Q +++R AE  D  L  + E +  L ++A   +EE+  Q++M+DD+G ++D+  EHV+NVN ++K+ LKEV RS+DK CVD+MCI+++LG   VL+ ++
Sbjct:    7 ELTTLLTKLYTMQEDTGAKPKSTEQEKKAKAQNVAVMGVGGTKKSQKTGSRFLELKSSIVGRLQDIHGMIADSKQKEKSRVGFQVNEQKETIAAQAKVREEIRQATDEWKELENIYRNEARKKRSKFTPDELEVQQVLVMKLQDEIEKCKEASQ----GTGRRMDPQGQLNSDNLAFLAAEDIYAPTSGGKGGWKGGTKGAALTGGQQSQIQALQERDAEF-DTQLDDIGEGIQDLAEIAELQSEEVKRQNQMLDDMGIKMDSVHEHVQNVNLKLKDTLKEVGRSSDKLCVDIMCIVLMLGFAGVLFKML 311          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL03_9PHAE2.060e-9960.41t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YY22_9STRA2.300e-8052.60Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
B8LD27_THAPS6.250e-3234.09Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
K0SY08_THAOC3.200e-3134.29t-SNARE coiled-coil homology domain-containing pro... [more]
W7UCC1_9STRA3.830e-2934.13Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1BK55_9STRA7.700e-2834.17Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0BZ32_9STRA2.180e-2732.74Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2RAR9_9STRA2.900e-2729.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PYZ1_9STRA6.580e-2731.25Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2XIT6_9STRA3.290e-2631.61Hypothetical protein n=1 Tax=Attheya septentrional... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3166766..3176424 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue7.4e-86
Seed eggNOG ortholog2880.D8LE18
Preferred nameSYP71
KEGG koko:K08506
KEGG Pathwayko04130,map04130
GOsGO:0000149,GO:0003674,GO:0005215,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005911,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006906,GO:0006996,GO:0008104,GO:0008150,GO:0008565,GO:0009506,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0022406,GO:0030054,GO:0031201,GO:0031224,GO:0032991,GO:0033036,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048278,GO:0048284,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051649,GO:0055044,GO:0061024,GO:0061025,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0090174,GO:0098796,GO:0140056
EggNOG free text desc.SNAP receptor activity
EggNOG OGs28JTR@1,2QS7N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-05_004390.1
Exons8
Model size2542
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1619.1prot_S-ischiensis_contig10.1619.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3168376..3176362 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815539.718686-UTR-S-ischiensis_contig10:3166765..31683751622815539.718686-UTR-S-ischiensis_contig10:3166765..3168375Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3166766..3168375 -
1695739756.9793293-UTR-S-ischiensis_contig10:3166765..31683751695739756.9793293-UTR-S-ischiensis_contig10:3166765..3168375Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3166766..3168375 -
1622815539.825668-UTR-S-ischiensis_contig10:3176362..31764241622815539.825668-UTR-S-ischiensis_contig10:3176362..3176424Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3176363..3176424 -
1695739757.0913024-UTR-S-ischiensis_contig10:3176362..31764241695739757.0913024-UTR-S-ischiensis_contig10:3176362..3176424Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3176363..3176424 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815539.7290566-CDS-S-ischiensis_contig10:3168375..31684861622815539.7290566-CDS-S-ischiensis_contig10:3168375..3168486Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3168376..3168486 -
1695739756.9987538-CDS-S-ischiensis_contig10:3168375..31684861695739756.9987538-CDS-S-ischiensis_contig10:3168375..3168486Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3168376..3168486 -
1622815539.7390308-CDS-S-ischiensis_contig10:3168783..31688761622815539.7390308-CDS-S-ischiensis_contig10:3168783..3168876Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3168784..3168876 -
1695739757.0098536-CDS-S-ischiensis_contig10:3168783..31688761695739757.0098536-CDS-S-ischiensis_contig10:3168783..3168876Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3168784..3168876 -
1622815539.750211-CDS-S-ischiensis_contig10:3169760..31698411622815539.750211-CDS-S-ischiensis_contig10:3169760..3169841Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3169761..3169841 -
1695739757.0215745-CDS-S-ischiensis_contig10:3169760..31698411695739757.0215745-CDS-S-ischiensis_contig10:3169760..3169841Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3169761..3169841 -
1622815539.763374-CDS-S-ischiensis_contig10:3170143..31702411622815539.763374-CDS-S-ischiensis_contig10:3170143..3170241Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3170144..3170241 -
1695739757.037397-CDS-S-ischiensis_contig10:3170143..31702411695739757.037397-CDS-S-ischiensis_contig10:3170143..3170241Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3170144..3170241 -
1622815539.7733264-CDS-S-ischiensis_contig10:3172319..31724881622815539.7733264-CDS-S-ischiensis_contig10:3172319..3172488Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3172320..3172488 -
1695739757.0489848-CDS-S-ischiensis_contig10:3172319..31724881695739757.0489848-CDS-S-ischiensis_contig10:3172319..3172488Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3172320..3172488 -
1622815539.784292-CDS-S-ischiensis_contig10:3173225..31733661622815539.784292-CDS-S-ischiensis_contig10:3173225..3173366Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3173226..3173366 -
1695739757.0606625-CDS-S-ischiensis_contig10:3173225..31733661695739757.0606625-CDS-S-ischiensis_contig10:3173225..3173366Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3173226..3173366 -
1622815539.795758-CDS-S-ischiensis_contig10:3175018..31751351622815539.795758-CDS-S-ischiensis_contig10:3175018..3175135Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3175019..3175135 -
1695739757.0704846-CDS-S-ischiensis_contig10:3175018..31751351695739757.0704846-CDS-S-ischiensis_contig10:3175018..3175135Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3175019..3175135 -
1622815539.8137004-CDS-S-ischiensis_contig10:3176302..31763621622815539.8137004-CDS-S-ischiensis_contig10:3176302..3176362Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3176303..3176362 -
1695739757.0798457-CDS-S-ischiensis_contig10:3176302..31763621695739757.0798457-CDS-S-ischiensis_contig10:3176302..3176362Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3176303..3176362 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1619.1

>prot_S-ischiensis_contig10.1619.1 ID=prot_S-ischiensis_contig10.1619.1|Name=mRNA_S-ischiensis_contig10.1619.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=290bp
MPANMDHQLDILLSELYNIQKDVGGPEGDKPAKKKGGEKEDKFNMLKTQI
IAKLGATCDMLSKEPSSKDPKAVIQRNQDIRTNLRALEEEWKEMDGVYQH
ERGKRRSKLTQEEMEARRQLLVDIRHEIGELKGIFQAGVVGASARPAYYG
GAGGPSEGFSRKDSRAGGAAVQDARPAGQLTQEQQFRVQQIRDRQAEMED
KYLSVVEESVARLGDVARSINEELILQDRMVDDLGNRVDTAQEHVKNVNT
RMKEVLKEVRSADKFCVDVMCILMLLGMVAVLYALIKSN*
back to top

mRNA from alignment at S-ischiensis_contig10:3166766..3176424-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1619.1 ID=mRNA_S-ischiensis_contig10.1619.1|Name=mRNA_S-ischiensis_contig10.1619.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9659bp|location=Sequence derived from alignment at S-ischiensis_contig10:3166766..3176424- (Schizocladia ischiensis KU_0333)
CGCAAGCGCACCGTGGCAGGCTCCTCGGCGGTAGCGACCTTCGGGGTCCG CAGTGGGCGACCATGCCTGCCAATATGGATCATCAGCTGGACATCCTTTT GTCCGAGTTGTACAACATTCAGGTGCGACGCCGGGCACAGGCACCGCCTC GGCCGCTGCAGCTGCCGCCACTGCCGAAACAGCGGCTGCTGCGCAGGCGG CAAGCAGCAGCCGCGCAGCGGAGGCGGCCGGGTCGGGGCGAGGGTGGTTG CAGCAGCAGTGGCAGAGATGTCGCAGAGCCTTGATCTCGCACCCGTTGAG TCCGGCGGGTGGGTCCCCGTAGCAGACGTTGGCCATGCCCCACGTCGGAG GGGCCCTGTGGCCGAACCACCGCTGCCATTTCTTTTGCGCAGTGCTGCCC TGGGCTGGCAAGCAGTGTGTTTTTGTCGGTTTCGGATTTCTCCATCTTGG GCCAAAAAAAAACCCGGCTCCGAGCGCAAAAGGACGTGGTGCGCAGCACT GGCGTGTTGCATTCATTCATGGTAGCAAATCGAGTTGACAAACCCCATCT TTTTAGGAGTTGTGAACTGGCTTACCTTTAGCAGGTTGTATACAATTTAC CAGCGATAATCCAAACTGCCGGGCCGGATTTCCGTTGTTTCTCTCTCTCT TGAACACACGGCGCTCCGGCCTCTACTTGTAGTGCCGATAGCCATTACGA CATCTCCGTTTCGGCGTTGTGAATGGTGTAGCTGTCAACGACCAATACTG CCTCCCCTCACCATCACCGCAAAGCCTTCAACAACACTTTCTGCGAACAT TATCGCGGGGGGCGGGGCGGAGGAACTGTTGTTTGGAAAGAATCGGAAAC ATGTATCCGAATACCCAGAAGCAGGCACTTGGATCATGTGTGTTCCTGCA GGCAGGCTACAATGTGTTTATGAGCCCCAGCCTGTTCACAAGTCTACACG TTTCGACGAGACGGAACCAATGCAGCGGGTTCCGTGGTTACTATGAGCTA TAGGCTCCGCCCCGTCTCGATCGAGGCGCGTGGTCAATGGTCTCGGGAAT ACGGCAAGCACAACGTGAGTACATATTCTATGAGCTGTAGGCTGTTGTTC TTGACACCGACCTGTGTGTGACGAGAACTGCTGCCACTGCTCGTGTAAAA CAGGTCAAGCATATTTTCATACGAGCGCTCACCACAGACACACACATAGA TAGAAGATCCCCCCAGTCTAACGCAAGCTCTTGCCCTGGCTTCCCGTGGG GTTGGGGGGCACATCGCTGCGATGCTGTCGCGCGAGCAGAAAGATGTTGG GGGGCCAGAAGGGGATAAGCCGGCCAAGAAGAAGGGGGGTGAGAAGGAGG ACAAGTTTAACATGCTCAAGACACAGATCATCGCAAAGCTTGGGGCCACC TGCGATGTGAGACATGCACCCACATGTACTTAATATTGTTCTGCAATGTT CCGTACTAAGTTAGTGTACAAAGCCGCTCCTGTCGGAGGGCAAACCGGAA GTTTTTTTGCTTGGGGCTGTCGGCAAAGCACGCAAGGTTCTGTCTCAAGA CCAGCCAATGACTGCGAGTACTCATACATATATGTATGCACTACTGTAGT ACCTACTGCACATACTACTCGTACTTCCAAGTATATGTATATATACTCAC GTGGTGCTTGCCGTAGTCCCGAGACCATTGACCCCGCGCCTCGTTCAGTA CGTACCGTAAATGTCGGAGAGATCTTGCCCCCCCGTGCCAATCTTCGGGA AAACTTTCTCGCCGAATACTGGTCGGATTCGCGCAGGAAAACTCGGAAAA TCTCCCTCAGGACCTGGGGGACTTTTCGGAGAGTTTTCGGGACAATTCAG GACCTTCCCGGCCAGAAATATTCCCCGAAAATTGTCCCGTGGGGGCAATA TCTCTCCGACGAATACGGTACTCTACTGCGATACTGTTCTACATACTTGG AAGTACGTAGTACGGTGTACTCACACACAGCAGTATGCTCCGAGCACTGC TGCGCCTACAGTAGTTCGAGTATTAACAGGAACACACAGGGCGAGGTGCA GGCCACTTCACTAACGACCTCAACAGTGGCCCTTCCTTATAGCTCGCCAC TAGTACCTGCCGCACTACCAAGCGGATCCGGGTACATTACGAGCGTGTAT TCACCGCAGTGCTGATCAGTACATAGAGTACAATGTAGTTTGCAGGTATG GCCGGTACCGCACTCCTGTTGGGCCCGCCATAAAATGTTCCCGAAACCGT CGGCCGCACGCATCCATCCGAGACAGAGCCGTGCCGCATGTGCTGTACTG TACTCGTGTGCATATATGTACTCGAGTACTCACCTTGTGCTTGCCGTAGT CCCGAGACCATTGTTCCGAATGTCCAAGTAGTTAGGAGGCTTGAGTTTCA ACGAGCCCAAGTGGTTAGGAGTCTTCAGTTCACAGTGTGCAAGTAGTTGG GAGACACAATCGCAAGTATACTCTCACTATATACGAGCATGTACTTACCT TGTGCTTGCCGTACTCCCGAGACCATTGACCACGCGGCGTTGACGGCGGA AGCAATCTCCCTCCCGCCCCTGGCACGCCAGGGCGGGGAGGGAGGGACCC CCCCGCTCATGGCGGGGGAGTGGTTGGGTCCATACCCCCCCCCGCTCCTG GCTCGTGAGAGTGAGGAGCTCATACGTACCACAGGTATGTACTGTACGGC GGCTACTTTGTCATACTACGTAGTACAAGCGCAGTATGAACAGGAACAAC ACAGGGCGAGGTGCAGGCCACGTCCCTAAAGACCTCAACAGTGGCCCTTT CCGTAGCTCGCCAGTACTGACGGTACAAGTGCTTCCAAGCACCCCGGATT CGTGTCTGCCGTGAGACCGCGCGGCCGCCCGGCAAGGTGAAGCGTGGCCG AGCACCCATCGCCTGCAGTACCTCTAGGAACTCCACTTGTGGCAGGCCGT TCTCACTATTCTCCCACCGAATGTACCGTACTCCATGCCGTGCGCACGTG GCCCCGTCGTCGTTTCCCTTCGTCCCCGTTTCTTGCGCTGTGTCGCGGTG TACTGTAGATGCTCTCCAAGGAGCCCTCGAGCAAGGACCCCAAGGCTGTC ATCCAGAGGAACCAGGACATACGCACAAACCTGCGTGCGCTGGAGGAGGA GTGGAAGGAGATGGATGGCGTTTACCAACACGAGAGGGGCAAGCGGAGGG TGAGCGGGCGCGGGTCTCTTGGGTGGTGGGGAAGACGTGGCACTGGTAGT CGCCCCGAGTGCAGCACAGCTGTAGTACACACGCGAGTACAGTACTACAG TACCTTCTTCCGATAGAGTGCTTTTAGAGCACACTACATACTTGGAAACA CTTGGAATTTCAACGTACTACTTCTAGGTACTCCTGGGTGTCGTGTGTTG TGCTTGCCATAAGTAGCGCTGTACTCGTACAGTAATACTCTACAAAGCGT ATGTTGCTCCATGGAAGTCCAAGCCGACCCGCGCGCACCTCTACTGCGCC CACGGTGAGAACACCACCGGGTTTTGCTCTTCCAACTGGCCGGCAGTGCC TCCCTCCTCTCTCCTCACTATTCGAGAGCTCCAGTACACCATTTAGGGAG GCATATACGGCGATTAGACTCCCTGCCGGGGTTGCTCTCCCTCCCTCCCC CTGCCGGCGGATGGTTGGTTGTTTCGTCCGTATGTCGGCCGCTCGGGGAG TGGCCCGCATTGCCGGACCACCCGGAAAACTCACGAGTAGCCCCCCCCTG CCAACCAACCGCGTTCAACCGCCGCCACCGCCGCCGCCGCCGCCCCCACC ACCACCGCCACCGCCGCCGCCGCCAACACCACTGCTGCCACCACCGCCAC CACCACCACCACCACTACCACCACCACCACCACCACCCCCACCACCCCCA CCACCCCCACCACCCCCCCACCACCACCTCCCCCAGAGCAAGTTGACTCA GGAGGAGATGGAGGCCCGGCGGCAACTGCTGGTGGATATTCGCCATGAGA TCGGGGAGCTCAAGGGCATATTCCAGGCGGGCGTGGTCGGGGCCTCCGCT CGCCCCGCATACTATGGCGGGGCAGGGGGGCCCTCAGAGGGGTTCTCGAG GAAAGGTACGTAGGTAGGCACCATCTGTGCAACGTGGAAGTGCTTTCTTT CCAAGTAGGAGTATATGGTTTCAAATATGTACTAGTGTGCACGTTGCTGC TCCGTCTATGCTCGGTCGAGGCGTGTGGTCAATGGTCTCGGGGCTACTTA GAGTAGCGGCAAGCTCTGTTCGACGTGAGCACATATGTACCGCTTCGCGG TATGTATACTACTGTACGTGGTGCGTGCCGTAGTCTTGAGACAATTGACC CCTGTATACCTAAGGGCGTCAAAGTGCTGCTTCGAAGTATACAGTAAAAG GTACTTCCTAGTACCGCTCAATGTACGACGTGCTCGAGTACGTAGGTACA CGTCGGTGTGCTTGCCGCCGTACATTGCCAAGAGATGACGGCCCGACCAT GCCGTAGCATGTACGGCACATGCGCCTGCGCCCACGCATGCACACACACA CACACACACACACACACAAACACGGAGCGAGAATGCCAGGGAGACAGGAT GATGTGGCCGCTCCAGGGCAGCGTACATGCTTATATACTTCCAAGTACTT CGAAGTACTACAGTACGTAGTATGTACTTCCAAGTGGTGCTGGTATCCCA TCCCTGTACTGAGTAGGTATACCAAGGCTGCAGTTCCGCAAGTACATAGA TGTACTATGCATGGATACTTTGCAGCACTGGCGGTGCTCACCAGGTACTC CTACATACAAGTAGCGCGTCCTTGTGGCATGCACACGGAGACGTGGGGCA TGAGAAACCGGTGGCTTTGTGGCCAGTGCCGAGAGCCCCCTGGCGACACG GTAACCACCCCTCTAACACTGACCAGGGAGGAGGGAGGATGGTGCCGAGG GGTTGCTCCGCTTCCGCCGAGGAGCGTGGAAGTTGCATTGCCGTTGTTCC CACCCCAGTGTGGCCACAGCAAGCGCGTTGGAAACACACACGCACACTTC TTCCGAATCCCCCCTTATAGTAGAGGCTGCCCTCTTCGTCCTCCCTGCCC CCCCTCCCCCCCGGGCAGCCACCTGCCCCTCGCCTCCCCCCCCACCGGCT CGCTCAGCGGTCATACGGCTATATATATGTATATATATGTACTCACGTGG TGCTTGCCGTAGTCCCGAGACCATTGACCCCGCGCCTCGTTCGAGGCGGA GCAGCTATGGTAAGTAAATCATGAGTATTGCATTTAGTCAGGAGTTTGCT GACGTGATGGAGGAAGCCGTGCAGCGAAAGGAGCGGGATAAGTACAGTGC TAGCGGAAGAAGGCACAATCACTATATGGTGAGATGATACTGCCGCCCCG GGAGCTGGGTCTCATCAAACCATATGTGCGAGGGAAGCCCGATTACGGAA CCCGTCTCATGTTTCTGTTTAGGTCGGAAACTATACCGGTGAGGGCGGGC AGGTCAGTGGGGGTTTCACAGGAGGCCGGGGATCAGACCACTAAGTGCGC GGATTGTCCATCAGACGATGAGACAGTTAGCCACGTCATGCTGGAGAACC CCCAATACGATGCCGCCAGAGTGGCCCTACACACAGAGCTCAAAGCCGCC CTCCTGAAATATATTTACAAACGTTCTAGGGACTCTACCCCTCGCCATCA GGTCATCACCCTCCTGGATCCATCAGGTAGACGTCTGGTTGGCCAGCGGA GGAGCAGAGTCATGTAGAGTGTGCTGTGAAAACTTTTCTTGTGTCGGCGT GGAGTGCGCGGTTGGAGCGAGTAGGTACCATAGATGGGTATCTTGGATCT CCCCCTGCTGTGTCCCGGCACGGCGAGGGAACCCCCTCTCCCGCTAGGCC TAGGTCTAGCAGGGGAGGCCCCCCCCCCACCCGGACTCTCACGAGTCCGG GATGGGGGGGGTATGCACTTGGCCGCCCCTCCGCCTCTGGCGGGGGGGTG GCCACCCCCTCCCACCCTGGCTCTGCCAGGGGAGGGAGGGGACCTGCTCC GTCTCGAACGAGGCGCGGGGTCAATGGTCTCGGGACTACGGCAAGCACCA CGTGAGTACATATATATACATATATATTGAATTTAGCATTTCCCCGCGCT CCCCGCACCCACCCCCCTGCCCTTTGCCAAAAGACTCAAGGGCCGGGGGG GCTGCTGTGCAAGACGCGAGGCCAGCGGGGCAACTGACACAGGAGCAGCA GTTCCGCGTGCAGCAGATCCGGGATCGACAGGTGTGTTTTGTGGTTTATG GTTTCTTGTCGGGGATTGAAAGCGGCCTTACGGGTCGTCCTGTGCAGTGA ATCTCCAAGTATGTACATACTCGCGCTCACACCTAACAGTGCTTGCCACA CCTGCTGTAGTCCTGTGCTTTCCGCGGTCCGTTGACCCCTATAGCGACTC GGCCGACTATACACAGAGCTACCTCGAAGTATGCAAGTGATATTGTCCTA GAGTAAGATTAGCCTTGAGCACTGACATACTTTGAAGTACATACATGCAT ACGGCGCGGTCGATATCGGTGGGGGCATGGCAGGCCGAAATGGAGGACAA GTACCTGAGCGTGGTGGAGGAGAGCGTGGCCAGGCTGGGGGACGTGGCGC GCAGCATCAACGAGGTGCGAGGGTGTGATTAATATAAATTGCTGCAATCA CACATGCGTGCGATTGGCTGTTCTCGTATTAGTATTATAAGGAACAACAC GGGGCGAGGTGCGGGCCACGTCACTAGAGACCTCAACAATGGCCCTTCCT TAGCTCGCCCGGGGAAAGTTGTGTGAGGATTACTAGTTGTTAAGAAGTGA AGGTTCTCATACTAGTGATTATCACAAATCGAGGTGGGAGGGTGTATATG TACTCACGTGGTGCTTGCCATAGTCCCGAGACCATTGACCCCGCGCCTCG TTCGAGACGGAGCTGTGGGAGGGTGTAAGGGAGCGTGTACAGTACTTACT CATGAGTTGCCTGACGTACTTGGCCATATTGGACATCGACCACGCGTCCC GCAGGGGTGACCCTACGGGATGAGTTGCCTACAGTAGCCATATTGGGCAT CGGCCATGCGTCCCACAGGGGTGAGCCTGCGGGATGAGTTGCCTGCCGTG TAGCGAGGCGGGAGCGGGGAATGAATACTTGGCTCGAGTACTTCGTTTCA TGTTAGGTGTTGCTTTGGGGCTGCGCGCTCCAAGTACATGGGTGGAGGCA TGCGTGAGTGAGAGCACTAGAGCACTAGAGCAACTGTCTATGCAATAACA GGCCAGGCCTCCCGCGGGGGGTGGCGCCGCCGCTGCCTCTCAACGGAACA AGAGGTTTTTTTTGGGAACAGGAAATTCCCCCCCCCCCCTCTTATGAAAG GTCGTCGCATTTGGTCTCCCCCTGGGCCTCCCCTGGTGTAGGGCGTGGTC AATGGCCATGCCATGTACTACTTGCGGCAAGAATACTCACGAGTGCCCCC CCCCCCTAAAAATGCCTTCCCTTGTGACTCTGTTCTGTGAGGGAGCAGGA GCTGATCCTGCAGGACCGCATGGTGGATGACCTTGGGAACCGGGTGGACA CGGCGCAGGAGCACGTGAAGAACGTCAACACCCGCATGAAGGTATGTACT GTACTGTACTGTACCAGCGCAGCTTCGAGTTGTGGTTTGCCGCGAGCAGG GTCCAACCTCCGCTCTAAGGGACCCATACATGTTGGCGCCCTTGCGACGT ACTTGTAGGTGGGATGATGTCGTCATCACTCGAGGGCGGTTGCGGCCGGA GGCGCGAACCTTGTACTCAGGCTACCTATACTATGGACTCGCACTTGTTA TTTTCTCTGGGTCGTTGCCAGCGCTCACTCACGTGCCGCCGCGGGCCGCC GCCGCACCTGGGCTTTCTGGCATCTCCCGATCGTACAGGAGGTGCTGAAG GAGGTGCGCTCCGCGGACAAGTTCTGCGTGGACGTCATGTGCATCCTCAT GCTGCTGGGCATGGTGGCGGTGCTCTACGCGCTCATCAAGTCAAACTGAC CCTCTACAGTTACGGTATGCATACCAGTATATACGTAGCAAGTTACAGCA GCCACTCATCGTGCGAGCTCACGTAAAAAAACACTGGCCGATGATCACGA TCGGCTGCGCGAGAAGACGCGGGCGGCAGTCGCTCGCGACCGGCACGCCG CAGGAAGGCATGCAGAAACGTGCGCCGCATCTTTCTCCCTGGCAGCCTGA GCGCGTACTGCGGTGCTCAACGGTAGGCATCTTGGGTCGGCCCGGGACTG CTAACAGTCAGCTAAGTATGTGTAGCCATGGCAGTGTGGGCCGCGCGTTC GGTGAAGGGGTGGGGGCGAGGCATCCTATGCCGCGCGCGTGCTTTCCTGA GGCAGAGGTCACTGCCCCGGGCCGCGCAGTGCGTGCATTCACAGCTCCCC AGCGTGCCAGTAGTCTCCCGAGTTTCCAAGCTTGAGGAGCACTCGCCTTT AGCCTTGAAGGTCCAGGCGGGCCGGCGGCGGCGGCGGCGGTGGCGGCGGG GGAGAAGCCGTGTGGATGCACGCATGCGCGCTTGCCGCCGTAAGCCGGCA CAGTAGCGGTAGTAGCATTGCCCGCGATGAGATGGACTGCTGTACAGTAC GTTGTACAGTCGACGGAGTCGAAGCAGCATGCAACACTTGCCGGTGTGTG AGCACTGTACAGTACCTGTTTTTTTTCTCTTTTTTTTGGTGCGACGACGT GCGGAGCAGCGGCACCCCCGCCCCCGCCCCTGCCCCCGCTGCCGCCGCCA CCGCCGCCGCCGCTTCCGGGCGTGGGTGTGTCACATCACATGGCGACTCA GCTCCTCGGCCTCCAGGGAGTTGGGTTTTCTTCGGGACCCGCCTCAGGTT TAGGGTCGATTTTCGGCGGCATGTACATATGGTACTCGTGCAAGAGTACT GTACGTCGAAGTAGTACGAGTAGGTACTTGAATTGATGACATGAAATTGA CGGAAAAGTGCGCAGGGCCGGACCGGGTCGTCCAAAAAATGCCGCGGCGC CAAATGTTTGCGGTCGGCGAGCGTGTCTGGCAAGCCTGAGCCGCGCTCAT AGCCATGATCATCACCGGCAGCAGGCAAGCAGCTACCTGCGCACCCGGGG CCCCGGGGCCCTATCATGGCCAGAGCCCGGCTCGGGACACGGTCTTGAGT GTGTCGTTCTGCGTGCAGGACTCGAGGCCACGCGGGCCCAAACGGCGTCA CCGCACCCGCGCCTGATTCTTCGAGCACTTGAGGGCAATTGCCTACAGCC AATCTACGGAGTCCTCGACTGACCGTGACGAACCAGTCCCGGACTTGGTG GATGCCGAACCCTGGGAGGTCCACTGGGAGGTTGACACCGGCACGCAAGC AGTCCATCGGGATATCTTCTGCCGTCAGAACAGCCCATCCTTGGTCACAC TGGGTACACCCCTGGGACGACTCCAAACCCCCGGGATCATGGACTGCCAC TGGTCCACCTCGTCGATGAACAGGATGACCCAACAGACGAGTAGCAAGGT CACCGCCATAGTCTGCACCACAGTAGCCTTCCAGCACGGGGCGTGAAGAA CGTACTTCCTTGCCCGCATACTTAATACCCATGAGAAGGGTGCCTTTCAG CATCTAAGT
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig10:3166766..3176424-

>mRNA_S-ischiensis_contig10.1619.1 ID=mRNA_S-ischiensis_contig10.1619.1|Name=mRNA_S-ischiensis_contig10.1619.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1740bp|location=Sequence derived from alignment at S-ischiensis_contig10:3166766..3176424- (Schizocladia ischiensis KU_0333)
ATGCCTGCCAATATGGATCATCAGCTGGACATCCTTTTGTCCGAGTTGTA
CAACATTCAGATGCCTGCCAATATGGATCATCAGCTGGACATCCTTTTGT
CCGAGTTGTACAACATTCAGAAAGATGTTGGGGGGCCAGAAGGGGATAAG
CCGGCCAAGAAGAAGGGGGGTGAGAAGGAGGACAAGTTTAACATGCTCAA
GACACAGATCATCGCAAAGCTTGGGGCCACCTGCGATAAAGATGTTGGGG
GGCCAGAAGGGGATAAGCCGGCCAAGAAGAAGGGGGGTGAGAAGGAGGAC
AAGTTTAACATGCTCAAGACACAGATCATCGCAAAGCTTGGGGCCACCTG
CGATATGCTCTCCAAGGAGCCCTCGAGCAAGGACCCCAAGGCTGTCATCC
AGAGGAACCAGGACATACGCACAAACCTGCGTGCGCTGGAGGAGGAGTGG
AAGGAGATGGATGGCGTTTACCAACACGAGAGGGGCAAGCGGAGGATGCT
CTCCAAGGAGCCCTCGAGCAAGGACCCCAAGGCTGTCATCCAGAGGAACC
AGGACATACGCACAAACCTGCGTGCGCTGGAGGAGGAGTGGAAGGAGATG
GATGGCGTTTACCAACACGAGAGGGGCAAGCGGAGGAGCAAGTTGACTCA
GGAGGAGATGGAGGCCCGGCGGCAACTGCTGGTGGATATTCGCCATGAGA
TCGGGGAGCTCAAGGGCATATTCCAGGCGGGCGTGGTCGGGGCCTCCGCT
CGCCCCGCATACTATGGCGGGGCAGGGGGGCCCTCAGAGGGGTTCTCGAG
GAAAGAGCAAGTTGACTCAGGAGGAGATGGAGGCCCGGCGGCAACTGCTG
GTGGATATTCGCCATGAGATCGGGGAGCTCAAGGGCATATTCCAGGCGGG
CGTGGTCGGGGCCTCCGCTCGCCCCGCATACTATGGCGGGGCAGGGGGGC
CCTCAGAGGGGTTCTCGAGGAAAGACTCAAGGGCCGGGGGGGCTGCTGTG
CAAGACGCGAGGCCAGCGGGGCAACTGACACAGGAGCAGCAGTTCCGCGT
GCAGCAGATCCGGGATCGACAGACTCAAGGGCCGGGGGGGCTGCTGTGCA
AGACGCGAGGCCAGCGGGGCAACTGACACAGGAGCAGCAGTTCCGCGTGC
AGCAGATCCGGGATCGACAGGCCGAAATGGAGGACAAGTACCTGAGCGTG
GTGGAGGAGAGCGTGGCCAGGCTGGGGGACGTGGCGCGCAGCATCAACGA
GGCCGAAATGGAGGACAAGTACCTGAGCGTGGTGGAGGAGAGCGTGGCCA
GGCTGGGGGACGTGGCGCGCAGCATCAACGAGGAGCTGATCCTGCAGGAC
CGCATGGTGGATGACCTTGGGAACCGGGTGGACACGGCGCAGGAGCACGT
GAAGAACGTCAACACCCGCATGAAGGAGCTGATCCTGCAGGACCGCATGG
TGGATGACCTTGGGAACCGGGTGGACACGGCGCAGGAGCACGTGAAGAAC
GTCAACACCCGCATGAAGGAGGTGCTGAAGGAGGTGCGCTCCGCGGACAA
GTTCTGCGTGGACGTCATGTGCATCCTCATGCTGCTGGGCATGGTGGCGG
TGCTCTACGCGCTCATCAAGTCAAACTGAGAGGTGCTGAAGGAGGTGCGC
TCCGCGGACAAGTTCTGCGTGGACGTCATGTGCATCCTCATGCTGCTGGG
CATGGTGGCGGTGCTCTACGCGCTCATCAAGTCAAACTGA
back to top