mRNA_S-ischiensis_contig10.1615.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1615.1
Unique NamemRNA_S-ischiensis_contig10.1615.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A836CKL1_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL1_9STRA)

HSP 1 Score: 328 bits (842), Expect = 2.570e-101
Identity = 167/270 (61.85%), Postives = 204/270 (75.56%), Query Frame = 1
Query:  289 RVPITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNSMGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLGDDPAALEQAVADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDDHKDSLSAAVDKAAAKA 1098
            RVPITLISGFLGAGKT+LLQ ML+NREGLRIGM+VND+A +NVDAKLVR          D+VELQNGC+CCSMS+EL  SV QLVSMS  RGY+YDH+VIE+SGV+EP+ VR  FQDAEA  M L+  +RLDTMVTVVD G FL+AY + D + +RPDLG        E A+ +GSAQR VVDLLVEQVEC+DV+V+NK D +  E+ +LLRDI+ AL PR+ ++ C+YGK PL   LG M G G+AE G IDDHK++LSA     ++ A
Sbjct:   88 RVPITLISGFLGAGKTTLLQQMLQNREGLRIGMIVNDVASINVDAKLVRGSTADSKGMLDTVELQNGCVCCSMSEELFTSVYQLVSMSTERGYQYDHIVIEASGVAEPRGVRTAFQDAEAMGMPLMQYIRLDTMVTVVDGGEFLDAYASGDRLAQRPDLGAAVSDPQFELAIMEGSAQRAVVDLLVEQVECSDVVVINKADLMSGEQEKLLRDIITALAPRSNIITCSYGKVPLASALGCMDGQGIAEFGVIDDHKEALSALTSSDSSSA 357          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A4D9DBW1_9STRA (CobW C-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBW1_9STRA)

HSP 1 Score: 268 bits (684), Expect = 7.330e-79
Identity = 145/280 (51.79%), Postives = 201/280 (71.79%), Query Frame = 1
Query:  283 DDRVPITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNSMGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLG----DDPAALEQAV---ADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGN-GVAESGSIDDHKDSLSAAVDKAAAKA 1098
            D+RVPITLISGFLG+GKT+LL+ +LEN++G+R+G++VNDMA VN+DAKL+R+DPN  GE  ++VELQNGC CC+M  EL  ++ +L++++ +RG  YDH+VIE++G++EPKA+R+ F  AE YEM LLD VRLDTMVTVVD+  FL+AYT+ D++ +RP+LGL     D P     ++   A  +AQR V +LLVEQVE ADV++LNK   +      LL ++   LNP A VV   Y + PL D LGV  G  GVA  G++DDHK+++  +   A  +A
Sbjct:   65 DNRVPITLISGFLGSGKTTLLKHILENKDGIRVGVIVNDMAAVNIDAKLLRNDPNQ-GE-RETVELQNGCACCTMRDELFNALYELLTLAQLRGVTYDHIVIETTGIAEPKAIRSNFHAAEDYEMPLLDLVRLDTMVTVVDSSVFLDAYTSRDSLLKRPELGLAEMMQDGPEGGIWSLDIEARATAQREVAELLVEQVEYADVVILNKDGLLAHPSRALLAEVAQTLNPWALVVPANYSRVPLEDFLGVNEGRMGVALGGALDDHKEAVEGSARLAQEQA 342          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A8J2SRV0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRV0_9STRA)

HSP 1 Score: 254 bits (650), Expect = 8.220e-74
Identity = 134/274 (48.91%), Postives = 192/274 (70.07%), Query Frame = 1
Query:  289 RVPITLISGFLGAGKTSLLQSMLENR---EGLRIGMVVNDMAEVNVDAKLVR--------DDPNSMGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLG--LGDDPAALEQAVADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDDHKDSLSA 1071
            +VP+TL+SGFLG GKT+LL+++LE     +  ++G+VVNDMA VN+DAK+          D P   G  A+ VE+ +GC+CCSM+ EL  ++++L ++S M+GYRY+H+VIE++G++EP+++R  FQDAEA  M L+++V L T+VTVVD+ AFL+AY    ++ +RPDL   + DDP+    A  D S QR VVDLLVEQVECADVL+LNK D V Q+++  L +I+ ALNP A V  C +G A L +VLGV    G A  G +D+HK +++A
Sbjct:   43 KVPVTLLSGFLGTGKTTLLRNLLEEASQDKDSKVGVVVNDMAAVNIDAKITARRLDLDESDSPKMQG-AAEFVEIGDGCVCCSMADELFTTLAELAAVSSMKGYRYNHIVIEATGIAEPRSIRDQFQDAEAAGMPLMEEVELSTLVTVVDSAAFLDAYAETASIAQRPDLAAPVDDDPSPFLMARFDHSLQRSVVDLLVEQVECADVLLLNKKDLVTQQQMDRLAEIMKALNPTAIVKQCEFGDAALNEVLGVAGDEGAARIGPVDEHKVAVAA 315          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A0G4F4G2_VITBC (CobW C-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F4G2_VITBC)

HSP 1 Score: 251 bits (642), Expect = 1.430e-72
Identity = 192/419 (45.82%), Postives = 257/419 (61.34%), Query Frame = 1
Query:  277 PVDD-----RVPITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRD--DPNSMGEGA----------DSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLGDDPAALEQ-AVADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDDHKDSLSAAVDKAAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGATSAAKRFGIDSFVYRQRRPFHPQRLAAVLNCMP 1479
            PVD+     RVPIT++SGFLGAGKT+LL+++LEN+EGLRIG++VNDMA VN+DAKL+R+  D  S+ EG+          D +ELQNGC CC+ + E   +V  ++ +   RG ++DH+VIE SG++EP+AVR  FQ  E    ++ ++  LDTMVTVVD+ AFL+AY T + ++  P     D    LE  ++     QRPVVDLLVEQ+E AD+ VLNK+DT++ ++L +L+ ++ ALN +AR+V+  YG+ PL  VLG M G G+A+   I   K+++  A ++                                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 +  T+A KRFGI+SFVY +RRPFHP RLA VL  MP
Sbjct:   78 PVDEATKASRVPITILSGFLGAGKTTLLKNILENKEGLRIGVIVNDMASVNIDAKLLREQTDDGSLEEGSSGDPLQQYAGDIMELQNGCACCTATDEFRDAVIAILRLGTRRGTQWDHIVIEMSGIAEPRAVREQFQLMEEAGSNIFEETALDTMVTVVDSSAFLDAYGTSEEIQRAPAWAFQDPMRFLEALSMRHRGIQRPVVDLLVEQIEAADICVLNKIDTIEAQQLPVLKAVIRALNEQARIVETAYGRLPLRSVLGCMEGKGLAQLTDITQLKETIHRAKEQ-----------------------------------------DEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCTDPDCTDPTHDHSHDTMTTAEKRFGINSFVYSRRRPFHPDRLAKVLAAMP 455          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A7S3F7L0_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F7L0_9VIRI)

HSP 1 Score: 239 bits (611), Expect = 7.720e-72
Identity = 130/265 (49.06%), Postives = 171/265 (64.53%), Query Frame = 1
Query:  295 PITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNSMGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLGDDPAALEQAVADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLG-VMAGNGVAESGSIDDHKDSLSAAVDKA 1086
            P+ ++SGFLGAGKT+L++ +L+N  GL+IG++VND+AEVN+DAKLVR+   S G   D+V+LQNGC CCS ++ELL S+ QL+ M   RG  +D +V+E SGV+EP+ ++  F DA    + L+  V LDTMVTVVDA +FLE Y   D+   RPD+G  D           G   RPVVDLLVEQVECADVLVLNK DTV  E+L+ L+ ++  LN  A VV C+Y K     VLG V  G   A S    +H+  +     KA
Sbjct:   25 PVVILSGFLGAGKTTLVRHLLQNEAGLKIGLIVNDVAEVNIDAKLVRNSDPSQG-AVDTVQLQNGCACCSKAEELLQSIEQLILMGQRRGEPFDRIVLECSGVAEPRNIKDQFNDASDAGVPLMSYVALDTMVTVVDASSFLEHYQARDSAASRPDIGFND-----------GETARPVVDLLVEQVECADVLVLNKTDTVKSEQLEYLKGLMGELNTLAAVVPCSYSKVDASKVLGNVGEGRWAANSTLDSEHRQMVEKTTKKA 277          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: D8LFI3_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI3_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 1.090e-70
Identity = 241/418 (57.66%), Postives = 275/418 (65.79%), Query Frame = 1
Query:  283 DDRVPITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNSMGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLGDDPAALEQAVADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDDHKDSLSAAVDKAAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------NGATSAAKRFGIDSFVYRQRRPFHPQRLAAVLNCMPGGAKLAL 1500
            DDRVP+TLISGFLGAGKTSLLQS+L+NR+G+RIGMVVNDMAEVNVDAKLVRDDPN+ G  +D+VELQNGCICCSMS+EL +S++ LV  +  RG  YDH+VIESSG+SEPK+VR+TFQDAE+Y                                                                        VL++ K              ILMALNP ARV+ CTYG   + DVLGVM G GVA+SG+IDDHKDS++A  + A A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +G T+AAKRFGID+FVYRQRRPF+P+RLA +L  MP  + LAL
Sbjct:  110 DDRVPVTLISGFLGAGKTSLLQSLLKNRQGIRIGMVVNDMAEVNVDAKLVRDDPNAQGADSDTVELQNGCICCSMSEELFVSINHLVERAEARGAPYDHIVIESSGISEPKSVRSTFQDAESY-----------------------------------------------------------------------GVLLMQK--------------ILMALNPHARVIGCTYGNVGIHDVLGVMDGQGVADSGTIDDHKDSMTALENNAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIPESGCGSXXXXXXXXXXXXXXXXXXXXXGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAIGDGTTTAAKRFGIDNFVYRQRRPFNPERLAELLKSMPSSSNLAL 442          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A6S8CKI4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CKI4_9STRA)

HSP 1 Score: 245 bits (625), Expect = 3.810e-70
Identity = 134/279 (48.03%), Postives = 189/279 (67.74%), Query Frame = 1
Query:  286 DRVPITLISGFLGAGKTSLLQSMLENREG--LRIGMVVNDMAEVNVDAKLVR---DDPNSM----------GEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLG-DDPAALEQAVADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDDHKDSLSAA 1074
            +++P+TL+SGFLGAGKT+LLQ +L+  +   +RIG+VVND+A VNVD+KLVR   +D  S           G  A+ VEL +GCICCS++ EL  ++S+LV+++  RG+ YDH++IES+GV+EP+++R +FQDA   +M L+ ++ LDT+VTVVD+ AFLEAY+    +  RPDL    DD     Q+  DGS QR VVDLL+EQ+ECADV++LNK D +  + L  L  I+ ALN +A V  C YG APL  VL      G A  G +D+HK ++ +A
Sbjct:   82 EKIPVTLLSGFLGAGKTTLLQQVLKQAQESKIRIGVVVNDVAAVNVDSKLVRSPFEDYQSASANMELRPPEGREAEFVELGDGCICCSIADELFATLSELVAVAKYRGFAYDHIIIESTGVAEPRSIRDSFQDATMDDMPLMHEIELDTLVTVVDSAAFLEAYSETRPVASRPDLAAKPDDAQTFIQSQYDGSLQRSVVDLLLEQIECADVVLLNKADLLASDDLGRLETIVSALNSQASVRTCVYGDAPLASVLASAKAQGAAAIGPVDEHKFAVQSA 360          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A7S3WNA0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WNA0_9SPIT)

HSP 1 Score: 230 bits (587), Expect = 1.200e-67
Identity = 128/263 (48.67%), Postives = 172/263 (65.40%), Query Frame = 1
Query:  292 VPITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNSMGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLGDDPAALEQAVADGSAQRPV-----VDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDDHKDSL 1065
            +P+T++SGFLGAGKTSLL  +L N+EG ++G+VVND+A VN+DAKLV         G D V+L NGC CCS   +LL S+++L+S+S MRG  YDH+++ESSGV+EP+ +RA FQ+A A +  L+  +RL+ MVTVVDA  FL  Y + + + +RPDL LG D    E   A G A+  V     V LLVEQVE ADV+V+NKVD   + +L  L DIL +LN  A +    YG  PL  +L     +GVA S  + DHK S+
Sbjct:   49 IPMTILSGFLGAGKTSLLSHVLNNKEGTKVGVVVNDVAAVNIDAKLVTRGSELDAWGEDMVQLSNGCACCSAGDDLLSSLAELISLSFMRGSPYDHIIVESSGVAEPRLLRAMFQEAAAMDWPLMRCLRLENMVTVVDASGFLTEYQSSEAIADRPDL-LGPDATPQEPLSAIGIAEPAVANMGVVQLLVEQVETADVIVMNKVDVASEPELVELEDILTSLNGFAALHRAKYGAVPLSSILVDRREDGVAASNEVMDHKSSV 310          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: B5YMX1_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMX1_THAPS)

HSP 1 Score: 230 bits (587), Expect = 7.930e-67
Identity = 127/267 (47.57%), Postives = 183/267 (68.54%), Query Frame = 1
Query:  292 VPITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNSMGEG------ADSVELQNGCICCSMSQELLLSVSQLVSMSHMR--GYRYDHVVIESSGVSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLGDDPAALEQAVADGSAQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDDHKDSLS 1068
            VPIT++SGFLG+GKT+LLQ ML N EGL+I ++VND+A VN+D+K+VR    +   G      A  VELQNGC CCS+S ELL SVS+L+++S +R  G ++DH+V+E SG++EP++VR  FQ+A  Y M L+++VRLDT+ TVVD   FLE        ++     + +      Q++   SA+  V DLLVEQ E ADVL+LNKVD ++  KL+ ++D++ ALNPRA+V+  ++GK  L ++L    G+GVA  G +DDHKD ++
Sbjct:    1 VPITVLSGFLGSGKTTLLQHMLNNNEGLKIAVIVNDVASVNIDSKIVRGQTIASDTGEVSATPAGIVELQNGCACCSLSGELLNSVSELMTLSDLRQDGEKFDHIVVEMSGIAEPRSVRNMFQEAMMYGMPLMEKVRLDTLATVVDCSTFLEYLKKGAQEKDEQQNWIEN-----MQSIVGDSAENGVCDLLVEQTEVADVLLLNKVDILNG-KLEDVKDVVNALNPRAKVLTTSFGKVDLNEILAYSKGDGVAIEGVVDDHKDYVN 261          
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Match: A0A0G4HWW6_9ALVE (cobW domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HWW6_9ALVE)

HSP 1 Score: 222 bits (566), Expect = 8.490e-66
Identity = 116/236 (49.15%), Postives = 166/236 (70.34%), Query Frame = 1
Query:  274 GPVDDRVPITLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNSMGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSGVSEPKAVRATFQDAEAYEMD---LLDQVRLDTMVTVVDAGAFLEAYTTMDNMRERPDLGLGDDPAALEQAVADGS----AQRPVVDLLVEQVECADVLVLNKVDTVDQEKLQLLRDILMALNPRARV 960
            G +   VP+TL+SGFLG+GKT++L+ MLEN+EGL+IGMVVND+A VN+D++L+R+         ++VELQNGC CCS S++ + +V+ LV M  +RG ++DH+V+E+SGV+EPK +R  FQ+ EA       L++  RLDTMVTVVDA  FL+AY + D   + P+        A E+ VA G+    A RP+VDLLVEQ+ECAD++V+NK D +  E+++ L +IL  LNP A+V
Sbjct:    3 GTLSAPVPVTLLSGFLGSGKTTMLKHMLENKEGLKIGMVVNDVASVNIDSRLIREGKGDGSWMENTVELQNGCACCSASEDFIRAVADLVQMGEIRGQKWDHIVVEASGVAEPKVIRDLFQELEAMAESPGALINFARLDTMVTVVDASVFLKAYLSSDAAIDSPEFAF-----ASEEEVAMGAQDIAAYRPIVDLLVEQIECADIIVVNKRDLMRPEQVKTLSEILRTLNPHAKV 233          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKL1_9STRA2.570e-10161.85CobW/HypB/UreG, nucleotide-binding domain-containi... [more]
A0A4D9DBW1_9STRA7.330e-7951.79CobW C-terminal domain-containing protein n=2 Tax=... [more]
A0A8J2SRV0_9STRA8.220e-7448.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0G4F4G2_VITBC1.430e-7245.82CobW C-terminal domain-containing protein n=1 Tax=... [more]
A0A7S3F7L0_9VIRI7.720e-7249.06Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
D8LFI3_ECTSI1.090e-7057.66CobW C-terminal domain-containing protein n=2 Tax=... [more]
A0A6S8CKI4_9STRA3.810e-7048.03Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3WNA0_9SPIT1.200e-6748.67Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
B5YMX1_THAPS7.930e-6747.57Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A0G4HWW6_9ALVE8.490e-6649.15cobW domain-containing protein n=1 Tax=Chromera ve... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3137237..3146474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.6
Seed ortholog evalue3.2e-63
Seed eggNOG ortholog2880.D8LFI3
EggNOG free text desc.ATP binding
EggNOG OGsCOG0523@1,KOG2743@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons11
Model size1550
Cds size1548
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815539.1141703-CDS-S-ischiensis_contig10:3137236..31373141622815539.1141703-CDS-S-ischiensis_contig10:3137236..3137314Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3137237..3137314 -
1695739756.7456183-CDS-S-ischiensis_contig10:3137236..31373141695739756.7456183-CDS-S-ischiensis_contig10:3137236..3137314Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3137237..3137314 -
1622815539.3717356-CDS-S-ischiensis_contig10:3138103..31382561622815539.3717356-CDS-S-ischiensis_contig10:3138103..3138256Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3138104..3138256 -
1695739756.7559798-CDS-S-ischiensis_contig10:3138103..31382561695739756.7559798-CDS-S-ischiensis_contig10:3138103..3138256Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3138104..3138256 -
1622815539.3895833-CDS-S-ischiensis_contig10:3138629..31389521622815539.3895833-CDS-S-ischiensis_contig10:3138629..3138952Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3138630..3138952 -
1695739756.7705827-CDS-S-ischiensis_contig10:3138629..31389521695739756.7705827-CDS-S-ischiensis_contig10:3138629..3138952Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3138630..3138952 -
1622815539.4003496-CDS-S-ischiensis_contig10:3139376..31394431622815539.4003496-CDS-S-ischiensis_contig10:3139376..3139443Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3139377..3139443 -
1695739756.7840776-CDS-S-ischiensis_contig10:3139376..31394431695739756.7840776-CDS-S-ischiensis_contig10:3139376..3139443Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3139377..3139443 -
1622815539.4161417-CDS-S-ischiensis_contig10:3140033..31401081622815539.4161417-CDS-S-ischiensis_contig10:3140033..3140108Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3140034..3140108 -
1695739756.7956674-CDS-S-ischiensis_contig10:3140033..31401081695739756.7956674-CDS-S-ischiensis_contig10:3140033..3140108Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3140034..3140108 -
1622815539.4310722-CDS-S-ischiensis_contig10:3140584..31406611622815539.4310722-CDS-S-ischiensis_contig10:3140584..3140661Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3140585..3140661 -
1695739756.804886-CDS-S-ischiensis_contig10:3140584..31406611695739756.804886-CDS-S-ischiensis_contig10:3140584..3140661Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3140585..3140661 -
1622815539.4447963-CDS-S-ischiensis_contig10:3141506..31416091622815539.4447963-CDS-S-ischiensis_contig10:3141506..3141609Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3141507..3141609 -
1695739756.814498-CDS-S-ischiensis_contig10:3141506..31416091695739756.814498-CDS-S-ischiensis_contig10:3141506..3141609Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3141507..3141609 -
1622815539.458247-CDS-S-ischiensis_contig10:3143790..31439621622815539.458247-CDS-S-ischiensis_contig10:3143790..3143962Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3143791..3143962 -
1695739756.8236706-CDS-S-ischiensis_contig10:3143790..31439621695739756.8236706-CDS-S-ischiensis_contig10:3143790..3143962Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3143791..3143962 -
1622815539.469783-CDS-S-ischiensis_contig10:3145105..31452361622815539.469783-CDS-S-ischiensis_contig10:3145105..3145236Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3145106..3145236 -
1695739756.8331444-CDS-S-ischiensis_contig10:3145105..31452361695739756.8331444-CDS-S-ischiensis_contig10:3145105..3145236Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3145106..3145236 -
1622815539.4827044-CDS-S-ischiensis_contig10:3145902..31461681622815539.4827044-CDS-S-ischiensis_contig10:3145902..3146168Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3145903..3146168 -
1695739756.843329-CDS-S-ischiensis_contig10:3145902..31461681695739756.843329-CDS-S-ischiensis_contig10:3145902..3146168Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3145903..3146168 -
1622815539.4975748-CDS-S-ischiensis_contig10:3146371..31464741622815539.4975748-CDS-S-ischiensis_contig10:3146371..3146474Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3146372..3146474 -
1695739756.8538177-CDS-S-ischiensis_contig10:3146371..31464741695739756.8538177-CDS-S-ischiensis_contig10:3146371..3146474Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3146372..3146474 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1615.1prot_S-ischiensis_contig10.1615.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3137237..3146474 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1615.1

>prot_S-ischiensis_contig10.1615.1 ID=prot_S-ischiensis_contig10.1615.1|Name=mRNA_S-ischiensis_contig10.1615.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=516bp
QGTVRAFAGPAARIVHGVREYARSNWLGPRSWVPAPLNVLRGGVQHAPGS
GSGRTHPLLSSPSSTTVDRDDQSGREVAAPDDATMGGGQGTGPVDDRVPI
TLISGFLGAGKTSLLQSMLENREGLRIGMVVNDMAEVNVDAKLVRDDPNS
MGEGADSVELQNGCICCSMSQELLLSVSQLVSMSHMRGYRYDHVVIESSG
VSEPKAVRATFQDAEAYEMDLLDQVRLDTMVTVVDAGAFLEAYTTMDNMR
ERPDLGLGDDPAALEQAVADGSAQRPVVDLLVEQVECADVLVLNKVDTVD
QEKLQLLRDILMALNPRARVVDCTYGKAPLLDVLGVMAGNGVAESGSIDD
HKDSLSAAVDKAAAKAKDTEAAAAAPAATAEPSESLDAGHHDHSHSGHQH
SHDHSHDKHEHKHDPDCAQCQAEAAAGGGQQAHSHSHSHDHGEHAEHHHD
HNHNHDHNGATSAAKRFGIDSFVYRQRRPFHPQRLAAVLNCMPGGAKLAL
ATETGLPVAADAEARD
back to top

mRNA from alignment at S-ischiensis_contig10:3137237..3146474-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1615.1 ID=mRNA_S-ischiensis_contig10.1615.1|Name=mRNA_S-ischiensis_contig10.1615.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9238bp|location=Sequence derived from alignment at S-ischiensis_contig10:3137237..3146474- (Schizocladia ischiensis KU_0333)
CAAGGAACTGTACGAGCGTTTGCAGGGCCAGCCGCGCGCATCGTCCATGG TGTCCGCGAGTATGCCCGGAGCAACTGGTTGGGGCCTCGGAGCTGGGTGC CCGGTGAGCCACAGCCCTACTGTAGTATTTGTGGGCCATGTGTCCCAATC GCAGCTGCCGGCCCCAAACACGGGCTTCCCCGGAGGTGTTTTCGCCGACA GTATGGCATGCAGGGGCCTGGTGCCTGTAGCCCGCAACCACCATGTAAGC ACGCCCCGCCTGTGCCTCCCTTTGTCGGCGTGTCCCACCTTGCACTACTT GTACAGCCCCTCTGAACGTCCTCCGGGGAGGCGTGCAGCACGCTCCGGGC AGCGGGAGCGGCCGCACGCACCCTCTGTTGTCGTCTCCGTCCTCGACCAC GGTGGACCGGGATGACCAGAGCGGCCGGGAGGTCGCGGCTCCGGATGATG CCACGATGGGGGGGGGGCAAGGGACCGGCCCCGTGGACGACCGTGTCCCC ATCACCCTCATCAGTGGGTTCCTCGGAGCCGGGAAGACTTCTCTTCTCCA GAGCATGCTGGAGAACCGCGAGGTGGGATCGGCGGGCGGGGTTTGCAGGA AGCATAGTGCTGTCAGAGCTCACGCAACGTATCACGACCCGGTTCGCCAA TGTTCCTGTGCCGCTGCCCTACTTGTACGAGTTACGAGTACAGCACAGTA GCAGGGCCGCGGAGATGAGGCGGCCAATATCTGCGGGCCGCATGGGGAAT GCTGCAACCTCCCCAGCAAAGCCCTGACCCGAATGCTTCAATATGCTTGG TTGTGTGTGTGTGCAGTACACCCACGCGCGCTCACACACACACTCACACA TACACACACAAACGCACGCGCGCGCGACCGTCAGTCTTGGCACAATGAAG CAGCGGAGCGCTTTCCTTGTCCGTTATACGGGCCCTTTTCCCCGCAGAGC GTACGGATCGTGGTGGCGGTGGAGGACTCAATATGACATGGCGGCGGCTG GCAACCCAAGTCGGGCCGTGGCTTTCCTGTCACTGGACAATAAGAATGTA CTCACTGCAGTGATCAAGGCCAAATCGCACCACTTTCAGTGCGATTTCCG ATCCCACGAGAGCCGGTACCGGTTCGGTACCGGTTCAAACAGAAAAAAGT CAGCGGCCCGTAGAACGAGGCAGACTACTTAATCGTAGCCGACCGTACTG GCGACCCTGACCCCGATCCCGACCGCGACCCCTGTCAGGGCCTGCGCATC GGCATGGTGGTGAACGACATGGCGGAGGTGAACGTGGACGCCAAGCTTGT TAGGGACGACCCCAACTCCATGGGGGAGGGCGCCGATTCCGTGGAGCTGC AGAATGGCTGCATCTGCTGGTGAGGCCCCGCGTCCTGTGCATCGCCCCAG TACACTCGGTGCTGGACTTTGATGTGATGGTGCAATGTGATGTGATGTCA CATTACTGCACACATCATATCATGTCATATCCCAGTATACAAGCTGGTCC GGGCAAACCTGCCCAAAAAGTTTCCGCACGCGAAATCTCGAGAACGACAA CGAGTTACGGCAAGCCGCGCACACCGAAATGCTCCTCTCGATGAGACGAA GAGATCAACATTCCCCGGTTGTTCCGGAACGGCGTGGTCGTCACGTAATG CCGATGTCGGCGCCACCGTCAACAGTTCGGGTGCTCCTATTGATGGAGGC GTTGCCCGACCGGGCCGCGTTAACTATAGGGTTTAGTACCGAGCCCTAAA TTAACGGGCGTAGCTACTCACGATTTTGCGGGCGCAGTTTTGCGAGTTAA ATTACGGGATTCGGATCCTGGGCGAACACGCTCACAACGCAAAACACTGT GGAGGGAGCTTTTCGATTTTTGTTTTTTCGTCGAGATATCGGGCTCTAAA AAATCACGAATACTCAAAATCTTTGATACCCAGCCGAAAAAAATATATAT AATCGAAAGGTCCCTCATAGTGATTCTCGTCCTCGCGGTCGGCAAGCGAT CGCAAAATGTCGTCTGCCAACTCGAAATAGTCGAGCCGCAAATTTTAGCG GAAGCTTTTGGGGCCGTCTTGCCCGGACCAGCTTGTACTCCGTGCTGGAC CGCCGATCAGCCCCCACATGGTAGAGCATGCAGGCTGGCCGTTCGGCCAT TGGCCTCGCCTCCCACCCCTCCCACCCTGGCTCTGCCAGGGGAGGGAGGG ATGCCTGCTCCCTCTCGGTCGAGGCGACACAAGGTGGTCAATGGTCTCGG GGCTACGGCAAGCACAGCGTGAGTACGAAGTATATATGCGTACAGTAGTA GTATATACTTCCGGAAGTACGCTTACTTCGAAGTATATACGTTGCAAGTA TATACCAACCGTAATCCACGAGAAGGAGCAAAGACGAGGATCATTCGGGT CCGGGGCATGCGCAGACAGGCGTGAGTACACACTACATACAGTGCAGGTA CAGCACGAACGGAACATTGGCAAGTGATACGCGTGCCCTTGCGCGTGTGC CGTGCTGTGCAGCTCCATGAGCCAGGAGCTGCTCTTGTCTGTGAGCCAGC TGGTGAGCATGTCGCACATGCGCGGGTACCGCTACGACCACGTGGTCATC GAGTCCAGCGGGGTGTCGGAGCCCAAGGCCGTGCGCGCCACCTTCCAGGA CGCCGAGGCCTATGAGATGGACCTGCTGGACCAGGTGCTGCATTGTCCTT ATCATTGAGATATCTCCGTCACTGCTAGCAGTAGCATGCCAGTGGCCTCT GACGCCGAGGCTTACGAAATGGACCTGCTGGACCAGGTGCATTGCATTGT CCCTATCACTGAGATATCTCCGTCACTGCTAGCAGTAGCAGGCCAGTGGC CTCTGACGCCGAGGCTTACGAAATTGACCTGTTGGACCACGTGCATTGCA TTGTCCTTGTCACTGAGATATCGCCGCCGCTGTTAGCAGTTGCAAGGCCT ACGACATGGACCTGCTGCACCAGGTGCGCATTGTCCTTGTCACTGAGATA TCGCCGTCACTGTTGGCAATAGATCAGGACGCAGAGGCTTACGAAATGGC TGGACCAGGTGCATTGCATTGTCGTTGTCACTGAGAATCTCCGTCACTGT TAGCAGTAGCAGTACAGGCCAGTGGCCTCTGGGCGGCGCCAAAGCCCAGC ATACGTTACGCGTACTCACTCGAGTGCGCTCGAGTGTTGTTGTAGAGTAC TCCCACAGACGGCAGAGTTTACTCCGGCGGGTAGTACAGTGTACTTCGAA GTACTCCCCCGATGAGTAAGTGGTAGAGGTTGCTTCCCCAGATACTGTAC GATAGTAGAGTTTACTCCCACAGGTGCTGCAGTAGAGCTGCCTCCCCCAG ATACTTTAGAGCAGTACTGTAGAGGATACTCCTACGTACTGTAGTAGAGT TACTCCCGCAGGCAGTAGAGGTACCAGCGTTTGGCAGAGGCGGTGGTGTT CCGAGGACGATTAGCATATGGAATTACCGTCCGAATGGGGGGGGGGGCAG GGGGCTGTGTGTCCCCGCCCTCTCCCCAAAGTGAGGCACAACTTGCGGCT GACACTGAGGAACACACCCGCCCGCACTATGCGTATGGCCTGCGGCAGTT GCTACTGCACGAGCACTTGAGTGCTTGTGCTTTGAAGTAGAGTGCACATC CCACCACATCTGTGTGATGTGATTGTCAAATTACAGTACATTGGCATGCA CATCACATCACATCACATCACAAAGGCGCGACGTGTATGCAAAGTATTGT AGTGCTTACGTACGAGTACAACCGTTTCGGGGTATTGACGAGTACCAAGT ACTCCGAGCAGCATAGCTCTGTATCGCAAGCAGCGTACAGTAGTGCACAT TGCAGTGCATGTTGTAGAACAAGCACCATGCGAGGTGCGGTCCAAAATGA CCGCGAACGTGGGCCGCCCTGTCTCGCCAAGCACCAGGCAAATCAGAGGG GGAGAAAGCGTAGCACTAGTTAGTACTAGTAGTACTCGAGTAGTACTGAG TAGTAGTAGTGGTAGTAGTAGTAGTAGTAGTAGTAATAGTAGTACTGTAG TATAGCAGGTGGTGGTGGTGGTGGTAGTAGTAGTAGTAGTAGTAGTAGTA GTACAAGTAGCAGCAAGCTGCGTGTACCAGTACGTACTTTGAGCAACTCG AAGTACTAAGTAGAGCATGAGTACTTTTAAAAACGATGCGCACGCGCTAG CTAGCCGAACCTCTACGATTGCCCTCCCGTAGTCCGGTCTGAATACATGA GATACAGTCCACCGTTGCTCTCTCCAACCTTGGGAAGAGGCGCGCGGCGG TCGTCTCTGGCCTACGGCAAAGACAACGCGGGTACTGTACACACTTCCTT TCAAGAACTCGTACATACACAAAGTACTTGCCAGGGGCGAGAGGGGGATT GCTCCGCCGTCAACGGCACGCGGTCAAAGGTCTTGGGACTACGGCAAGCA CAACGTGTGTGTACTCACGTCTCTGTGCATGCCCTGGACCCGAACGATCC TCGTCTTTGCTCCTTCTCGTGGATGGCTGGCACAATGTGGCTACATATAT GTGTACTTCGAAGTAGTGTACGAGTATATACTACGTACTTGTAGTATATA TATACGCACACAACAGTGAGTCGAAGTCGAAGAGGCTACGACGCATTTCA TCTTTGTTCTGTGCACACCTCTCACCACCGTCGAGCGTGCGCGGTCTATG TTGGGCTGGCTGGTGGCCAGCATGGGGCACGGCATGGGGCGAATGATGGA CAGGTGCACACACACACACACACACACACACACACATTCTCACGCACGCA TGCATGGGGGCACGTGCTGCACGCCATGCGGTGCCGGTGCTGCTCGGCGG TGTTGATGCGCCAAGGTTCGGCTGGACACCATGGTGACGGTGGTGGACGC TGGAGCCTTTCTGGAGGCGTACACCACTATGGACAACATGAGGGAACGCC CGGACCTGGGACTGGGAGGTGAGCCAGGCCAAAAAGATCTGGCGGCAGGG GCCTAGAGTTCAGTAGGTACCCTGACTCGCATGAGTCACTACTGTATACT TCGAAGTATATTCTTTCTCTGCGTATTCGGAATGGGTGCACACACCTCCC CCGGGGCACTTGCTCAAACACACCGCCTCCCAGCACTTGTCGCGAGGCAT GCACGTGTATACATGCGACACACACTCACGCACACACGAGTTCACACACA CACACACACACATGTGCAGCACGAGCGAAACTGGTTGTTGTGCCAATTGC TGCGACATGGATGTGGCAGCGGTGCCATATCTCCGTGTCCATGTGTTCTC TGTGTGTACTCAAGTCGGACAGGAGACACCCCATCCTGTACATGCCGCCG ACTGTCGGCCCAGTACACTATTTGCTGGACCGCCGGCCAGCCCCCGCGGG GTAGCCTTTCGGCTCTTTTTCTCTGCTGTAGAGCTCTACTTCGAAGTAGA AGTACATACTTTTGGATCATCCATTTTCTCTTATCATCAGTCTCCTTGTT CTCTCCCTTCTCCTGCTTCTCTCTGTTGTACGGCGAGTAGGTACGTGTGC GTACGAGGCGTGGTGTCAATTAGTCTCGGGACTAGCGCAAGCACTGTTGG GCGTGAGTACGTTTGTGCTCGGAAAATTGTACAGCACTGCTGTACAAGTA CCACTGTACAAGTACCACTGTACAAGTACTGCTGTACAAGTGCGCTTGCG TACTCGTATCCGAGTAGGCAGGCGACCTGAACTGACGCGGCCGCATGCCC CATCTTTTCCTGTCTTCCGCTCCTTGGCCGTGGCCATTGGCTGCCTGCGG CGTGTTCCGCCAGACGATCCCGCGGCCTTGGAGCAGGCCGTCGCGGACGG AAGCGCGCAAAGACCCGTGGTTGACCTCTTAGTGGAACAGGTACGTACTG TAGACTCTACACAGTACGAGTCACGAACGGAGGGGGCTTCGCTGAGCGAG CGTATCGTATCGCGATTATGTTTGTTTGAGTGCCCTTGGATCAGGACGGG ACGGGACGCTGATCCCGCGGTAAAGAAGCGCGCTGTGTCTCGGACGTACA CAGTTGAGTGTACCGTCGTCCTCCAGCGAAGCGCTGCTTGGGTGTTCACC GTGTGAAGACCTCTGCTAGCTGCGGTAAGAGCACACTATTACTAGTAGTA CAGTACGAGTACGTAGTAGCCTAGTAATAGGTCCTGCTGTAGAGTCAGAA ACTCCATTGTTCTTCCGGCGGCTGTTTTTTTGTTCATAGAACCTGCTCCT GTCCTCCTGTTTTGCAGACGATCCCGCGGTGTGCTCCTGCTCCTGAGCGA CTTCCCAAATACTGTAGAACCTCTGCCTTGGCGCCTGTTGCACCTTGTGG TGGCGTGTGTGTGCAGGTGGAGTGTGCCGACGTCCTGGTTCTGAACAAGG TGGACACTGTCGATCAGGAAAAGCTACAGCTCTTGCGTGACGTGAGTGCA GGCACACCTCATGGGGGCAGCTCGCGGCTGAGGGGGGGAGGGAGGGAGGG AGAGCAGGAGGAGGGCAGAGAGGGAAGGGTGGAAGAGGGGGGGCAGATGC GGAAGGATGTTTGGGAGGGGGGAAGGAGGCCAGACAGATTCTCCTGTCGG TTCTTTGTCGGGTGTCGTCGCTGCGGGTCGAAACGGCTGTTTCTTTTTGG CGCCCTAAGTGGGAGAACCTTGCCACGAGGCGTGAGCGGTGATGTGTGCT CTTGTGTCTTGTGTGTCGTCAACGAGTTTGCAGCAGGGCGAGGAGGACGA CACTGAAGGAAGGTCTGCGGCGGCCGGGGGAACACTCAAACCAACCCGAG CCGAAATCCTGTATCATGCAAGTATCATGTGCAGCCACGCATCATAATAC TTCCAAGTACGAAGTACGATGTAGGTACAGTGCATATATATATATGTACT CACGTGGTGCTTGCCGTAGTCCCGAGACCACTACAGTAAACATCATGAAC ATTGCATAACATTCCTGTCCCCTGCAATGTGCCCACCCGGCCGTGGGCTT GTCTGCTGGCCGGCCCGTCTGTTCCTGGCAGATTCTTATGGCGCTCAATC CCCGGGCCAGGGTGGTGGACTGCACCTACGGAAAAGCCCCGCTTTTGGGT GAGAGACCCGGCAGGTGGACAGGCAGGGAGGGCGAGAGGGGGGGGCGGAT GAGGGGGAGACAGGGAGCCAGAGAGGGCGTGGTTTTTGCTATGAATTGCT TGCCGTTGCCGTGCCACTGACTGACCGCACTTCCCGAACGGGAGTACGCT TTGTTTTGCTGGTGCTTGGATGACTCTCCGTTCCGCTATGCCATGGATGA CAAGCGGGGCCCAGGGCTGCACAGCGTGTAGAGTAGCTGTCCAGTGTAGG AGGGGGGTGGAAGGGGAGGGGGGCTGGATGGATGGACGGGGCGGGCGGGG TACCTGATTGACACACACACACACACGCACACGGCCATGGCATGACTGCT TGTTTTCTCCCAACCCGTACTTGTGTACTCATGCTTGTGTACTCGTATGT TGCTTTGCCCATGGGCGGGCAGACGTCCTGGGGGTGATGGCCGGCAACGG GGTGGCCGAATCCGGCAGCATCGACGACCACAAGGACTCTCTGTCCGCCG CGGTGGACAAAGCTGCTGCCAAAGCAAAGGATACGGAGGCGGCGGCGGCG GCGCCGGCGGCGACAGCGGAACCCTCAGAGAGCCTGGATGCGGGCCACCA CGACCACAGCCACAGCGGCCACCAACACAGCCACGACCACAGCCACGACA AGCACGAGCACAAGCATGACCCGGACTGTGCACAGTGCCAGGCCGAGGCC GCGGCGGGGGGGGGGCAACAGGCCCACAGCCACAGCCACAGCCATGTGAG TGGGGGGGGGGGGGGGGCTTATTGTGGCGTGTGCTCGGAATCCAAGCGCA ACGTGAGTACTCGAGTAAATATTCTAGTATATACTTTGAAGTACTCGAGT ACAGCACTCGGGTATATATATATATATATGTATGCTTGGAAGCCGCCTAC AGGTGCACAAGTACTCACACCGTGCTTGCCGTACTTATTGAAGTCACCCT CTCTCGGCTTACCGGCCGTTATCGGCTAGTGTACTGTACAGTACAGTACG ACTACGAGCACTGAGTTGCTGTGCCACCACCCTCGCGGGGCGGGTGAACG CCGCCGCCGCCGCCCCCGCGCCGCCATCGCGCTGCTGCCGTTCGACTGCG CTCTATGGCGGTCGACAGGACCATGGGGAACACGCGGAGCACCATCACGA CCACAACCACAACCACGACCACAACGGGGCCACTTCGGCGGCCAAGCGCT TTGGGATTGACAGCTTTGTGTACCGGCAGCGGCGGCCCTTCCACCCCCAG CGGCTGGCGGCGGTGCTGAACGTGAGCAGTGGTGGCATATCGATATTCCA TCACTGAACGTGAGAGGACAAGGAGTGAGCGCGCCCGGCCCTGGTGATTC TCGACTCCCCTCCCCTCCCCTCTCATGCAAATCACTTTGCGGCACGGTTG CTCGAGCACATTTCCCCCCCGTGGCTCTTGCTGCTGGAGCACATTTCCCC CCCGTCGCTTGCTGCAGCATACTGTACTTGGAAGTATATGCACATGCATA TATATATGCATGCTCATGTTGTGCTTGCCGCAGTCCACAGGGCAGCGATC ACGAGCCTCGACTGAGACGGAGCAGGCCCCCTCCGTCCCCTGCGGAGCCA GGGTGGGAGGGGGGGGGACACCTCCGCCAGGGGCTGAGGGCTGGCCATTT CAATACAGTGTAGACGTACTTCGTATATGTAGATACATACACCCACATTG TGCTTGCCACAGTCCAGAGACCACCGACCACACACCATTGACAGCGGAGC AGGTTGGGAGGGACGGACCACCCCCCCGCCATGGGTGGGTACATTGCAGT ATTGTAGTACAGTTGAATGTCCTGCCTGCCTTCACCACTCACGCTCTGGT GTGTGCGGGTTGTCTCCCTCTCTCTCCCTCTCCCCCTCTCTCATTTTGTC CCTCTCTCTCTCTGTTCACACTCATGCTGCGATATGTGCAGGTCTTTTGT CTCTCTCTCTCTTCCTCATTCTCCCTCGTCCCCCCCACCCCCCTCTCTTT CCCTGTCTCTCTCTGTGTGTGCATGCTTGCTTGCGCACTTGCGCGCCGGT GCCCCCGCAGTGCATGCCCGGCGGCGCCAAGCTGGCTCTGGCCACGGAAA CCGGCCTGCCTGTGGCGGCAGATGCCGAGGCACGAGAC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig10:3137237..3146474-

>mRNA_S-ischiensis_contig10.1615.1 ID=mRNA_S-ischiensis_contig10.1615.1|Name=mRNA_S-ischiensis_contig10.1615.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3096bp|location=Sequence derived from alignment at S-ischiensis_contig10:3137237..3146474- (Schizocladia ischiensis KU_0333)
CAAGGAACTGTACGAGCGTTTGCAGGGCCAGCCGCGCGCATCGTCCATGG
TGTCCGCGAGTATGCCCGGAGCAACTGGTTGGGGCCTCGGAGCTGGGTGC
CCGCAAGGAACTGTACGAGCGTTTGCAGGGCCAGCCGCGCGCATCGTCCA
TGGTGTCCGCGAGTATGCCCGGAGCAACTGGTTGGGGCCTCGGAGCTGGG
TGCCCGCCCCTCTGAACGTCCTCCGGGGAGGCGTGCAGCACGCTCCGGGC
AGCGGGAGCGGCCGCACGCACCCTCTGTTGTCGTCTCCGTCCTCGACCAC
GGTGGACCGGGATGACCAGAGCGGCCGGGAGGTCGCGGCTCCGGATGATG
CCACGATGGGGGGGGGGCAAGGGACCGGCCCCGTGGACGACCGTGTCCCC
ATCACCCTCATCAGTGGGTTCCTCGGAGCCGGGAAGACTTCTCTTCTCCA
GAGCATGCTGGAGAACCGCGAGCCCCTCTGAACGTCCTCCGGGGAGGCGT
GCAGCACGCTCCGGGCAGCGGGAGCGGCCGCACGCACCCTCTGTTGTCGT
CTCCGTCCTCGACCACGGTGGACCGGGATGACCAGAGCGGCCGGGAGGTC
GCGGCTCCGGATGATGCCACGATGGGGGGGGGGCAAGGGACCGGCCCCGT
GGACGACCGTGTCCCCATCACCCTCATCAGTGGGTTCCTCGGAGCCGGGA
AGACTTCTCTTCTCCAGAGCATGCTGGAGAACCGCGAGGGCCTGCGCATC
GGCATGGTGGTGAACGACATGGCGGAGGTGAACGTGGACGCCAAGCTTGT
TAGGGACGACCCCAACTCCATGGGGGAGGGCGCCGATTCCGTGGAGCTGC
AGAATGGCTGCATCTGCTGGGCCTGCGCATCGGCATGGTGGTGAACGACA
TGGCGGAGGTGAACGTGGACGCCAAGCTTGTTAGGGACGACCCCAACTCC
ATGGGGGAGGGCGCCGATTCCGTGGAGCTGCAGAATGGCTGCATCTGCTG
CTCCATGAGCCAGGAGCTGCTCTTGTCTGTGAGCCAGCTGGTGAGCATGT
CGCACATGCGCGGGTACCGCTACGACCACGTGGTCATCGAGTCCAGCGGG
GTGTCGGAGCCCAAGGCCGTGCGCGCCACCTTCCAGGACGCCGAGGCCTA
TGAGATGGACCTGCTGGACCAGCTCCATGAGCCAGGAGCTGCTCTTGTCT
GTGAGCCAGCTGGTGAGCATGTCGCACATGCGCGGGTACCGCTACGACCA
CGTGGTCATCGAGTCCAGCGGGGTGTCGGAGCCCAAGGCCGTGCGCGCCA
CCTTCCAGGACGCCGAGGCCTATGAGATGGACCTGCTGGACCAGGTTCGG
CTGGACACCATGGTGACGGTGGTGGACGCTGGAGCCTTTCTGGAGGCGTA
CACCACTATGGACAACATGAGGGAACGCCCGGACCTGGGACTGGGAGGTT
CGGCTGGACACCATGGTGACGGTGGTGGACGCTGGAGCCTTTCTGGAGGC
GTACACCACTATGGACAACATGAGGGAACGCCCGGACCTGGGACTGGGAG
ACGATCCCGCGGCCTTGGAGCAGGCCGTCGCGGACGGAAGCGCGCAAAGA
CCCGTGGTTGACCTCTTAGTGGAACAGACGATCCCGCGGCCTTGGAGCAG
GCCGTCGCGGACGGAAGCGCGCAAAGACCCGTGGTTGACCTCTTAGTGGA
ACAGGTGGAGTGTGCCGACGTCCTGGTTCTGAACAAGGTGGACACTGTCG
ATCAGGAAAAGCTACAGCTCTTGCGTGACGTGGAGTGTGCCGACGTCCTG
GTTCTGAACAAGGTGGACACTGTCGATCAGGAAAAGCTACAGCTCTTGCG
TGACATTCTTATGGCGCTCAATCCCCGGGCCAGGGTGGTGGACTGCACCT
ACGGAAAAGCCCCGCTTTTGGATTCTTATGGCGCTCAATCCCCGGGCCAG
GGTGGTGGACTGCACCTACGGAAAAGCCCCGCTTTTGGACGTCCTGGGGG
TGATGGCCGGCAACGGGGTGGCCGAATCCGGCAGCATCGACGACCACAAG
GACTCTCTGTCCGCCGCGGTGGACAAAGCTGCTGCCAAAGCAAAGGATAC
GGAGGCGGCGGCGGCGGCGCCGGCGGCGACAGCGGAACCCTCAGAGAGCC
TGGATGCGGGCCACCACGACCACAGCCACAGCGGCCACCAACACAGCCAC
GACCACAGCCACGACAAGCACGAGCACAAGCATGACCCGGACTGTGCACA
GTGCCAGGCCGAGGCCGCGGCGGGGGGGGGGCAACAGGCCCACAGCCACA
GCCACAGCCATACGTCCTGGGGGTGATGGCCGGCAACGGGGTGGCCGAAT
CCGGCAGCATCGACGACCACAAGGACTCTCTGTCCGCCGCGGTGGACAAA
GCTGCTGCCAAAGCAAAGGATACGGAGGCGGCGGCGGCGGCGCCGGCGGC
GACAGCGGAACCCTCAGAGAGCCTGGATGCGGGCCACCACGACCACAGCC
ACAGCGGCCACCAACACAGCCACGACCACAGCCACGACAAGCACGAGCAC
AAGCATGACCCGGACTGTGCACAGTGCCAGGCCGAGGCCGCGGCGGGGGG
GGGGCAACAGGCCCACAGCCACAGCCACAGCCATGACCATGGGGAACACG
CGGAGCACCATCACGACCACAACCACAACCACGACCACAACGGGGCCACT
TCGGCGGCCAAGCGCTTTGGGATTGACAGCTTTGTGTACCGGCAGCGGCG
GCCCTTCCACCCCCAGCGGCTGGCGGCGGTGCTGAACGACCATGGGGAAC
ACGCGGAGCACCATCACGACCACAACCACAACCACGACCACAACGGGGCC
ACTTCGGCGGCCAAGCGCTTTGGGATTGACAGCTTTGTGTACCGGCAGCG
GCGGCCCTTCCACCCCCAGCGGCTGGCGGCGGTGCTGAACTGCATGCCCG
GCGGCGCCAAGCTGGCTCTGGCCACGGAAACCGGCCTGCCTGTGGCGGCA
GATGCCGAGGCACGAGACTGCATGCCCGGCGGCGCCAAGCTGGCTCTGGC
CACGGAAACCGGCCTGCCTGTGGCGGCAGATGCCGAGGCACGAGAC
back to top