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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 1 |
| Model size | 1065 |
| Cds size | 561 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815505.6840787-UTR-S-ischiensis_contig10:3068236..3068298 | 1622815505.6840787-UTR-S-ischiensis_contig10:3068236..3068298 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3068237..3068298 + |
| 1695739738.362113-UTR-S-ischiensis_contig10:3068236..3068298 | 1695739738.362113-UTR-S-ischiensis_contig10:3068236..3068298 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3068237..3068298 + |
| 1622815505.7330563-UTR-S-ischiensis_contig10:3068859..3069301 | 1622815505.7330563-UTR-S-ischiensis_contig10:3068859..3069301 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3068860..3069301 + |
| 1695739738.3833418-UTR-S-ischiensis_contig10:3068859..3069301 | 1695739738.3833418-UTR-S-ischiensis_contig10:3068859..3069301 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3068860..3069301 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815505.71734-CDS-S-ischiensis_contig10:3068298..3068859 | 1622815505.71734-CDS-S-ischiensis_contig10:3068298..3068859 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3068299..3068859 + |
| 1695739738.372624-CDS-S-ischiensis_contig10:3068298..3068859 | 1695739738.372624-CDS-S-ischiensis_contig10:3068298..3068859 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3068299..3068859 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1610.1 >prot_S-ischiensis_contig10.1610.1 ID=prot_S-ischiensis_contig10.1610.1|Name=mRNA_S-ischiensis_contig10.1610.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=187bp
MTSCPSTAGASLPARREGRLRISRPRMRRCRASALTEPLGNEAVGGGLIC
KGGWCRCSAGGTDWAPFAIAVCFMLRVVASACVSVVFFCRLLREQALWHA
SPPLGLVWLGVGFCYCVGWSGHGGGHVQYLWRAGIPSMCPLSLHPRFVCV
TSTCPSPETIEFGARPLGELGTTTLWSLGREGVFER* back to topmRNA from alignment at S-ischiensis_contig10:3068237..3069301+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig10.1610.1 ID=mRNA_S-ischiensis_contig10.1610.1|Name=mRNA_S-ischiensis_contig10.1610.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1065bp|location=Sequence derived from alignment at S-ischiensis_contig10:3068237..3069301+ (Schizocladia ischiensis KU_0333)
GGGGGCGAGGGCGGGGCACCGGGCCACTCCCCGGGGCAAGGGCAAGGTGG
CGGACAACAAGGATGACCTCGTGCCCGAGTACGGCTGGGGCATCACTACC
GGCCCGGCGGGAGGGTCGTCTGAGGATAAGCAGGCCCCGCATGCGGCGTT
GCCGGGCCTCAGCCTTGACTGAGCCCCTGGGGAATGAGGCGGTGGGTGGT
GGCTTGATTTGCAAGGGCGGGTGGTGTCGGTGTTCCGCAGGGGGCACGGA
TTGGGCGCCGTTTGCGATAGCGGTTTGTTTCATGCTGCGTGTGGTAGCCT
CTGCTTGCGTGTCTGTGGTCTTTTTTTGCCGCCTGCTACGGGAGCAGGCC
CTCTGGCATGCTTCGCCGCCTTTGGGGCTGGTTTGGCTGGGTGTTGGTTT
TTGTTACTGTGTTGGATGGAGCGGACACGGAGGTGGCCATGTACAGTATT
TATGGAGAGCTGGCATCCCAAGTATGTGTCCGCTCTCGCTGCATCCGCGA
TTTGTTTGTGTTACTAGTACATGTCCTAGCCCAGAGACGATTGAGTTTGG
CGCCCGCCCTCTTGGGGAGTTGGGGACCACCACGCTGTGGTCCCTGGGAC
GGGAGGGTGTATTTGAGCGATAGTTAGTAGGAGTCGCAGCTAGTTAGACG
GTAAGAGTCGGGCCTACGCGCCGGCACAGCAGTGGGAAGGTGTGGGCCTA
TCCCGGGTGCTGCTCCTGCCGGAGTGCGGTCTCCGGGCCATCGGCCATGC
ACGCGTCACATGCATACCCATAAGATATGAATCACTATCGTGAAAAGCTC
GCGCTTGGGCATAGGTAGATGTAACTGCCGTCAATTATCGCGTTACTGCA
GCTAAAAACCCTGCTAGGGCCTCTCTGTGTGATGTTAGTCACCGATGTTG
CCCCCTCGATGAAAACCTTCGGCAGTTTTAGGCAGCTACTTTCCCCTGGC
GCTCTTATGGACCTCTACGATTGTGCAGGGAGTCTTTGCAAAGCAAAAAA
AAGGAACACCATATAGATGCAAAGCAAAGCAAAAAAAAAAGGAACATATT
GCGCCGGACGAAAAA back to topCoding sequence (CDS) from alignment at S-ischiensis_contig10:3068237..3069301+ >mRNA_S-ischiensis_contig10.1610.1 ID=mRNA_S-ischiensis_contig10.1610.1|Name=mRNA_S-ischiensis_contig10.1610.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1122bp|location=Sequence derived from alignment at S-ischiensis_contig10:3068237..3069301+ (Schizocladia ischiensis KU_0333)
ATGACCTCGTGCCCGAGTACGGCTGGGGCATCACTACCGGCCCGGCGGGA
GGGTCGTCTGAGGATAAGCAGGCCCCGCATGCGGCGTTGCCGGGCCTCAG
CCTTGACTGAGCCCCTGGGGAATGAGGCGGTGGGTGGTGGCTTGATTTGC
AAGGGCGGGTGGTGTCGGTGTTCCGCAGGGGGCACGGATTGGGCGCCGTT
TGCGATAGCGGTTTGTTTCATGCTGCGTGTGGTAGCCTCTGCTTGCGTGT
CTGTGGTCTTTTTTTGCCGCCTGCTACGGGAGCAGGCCCTCTGGCATGCT
TCGCCGCCTTTGGGGCTGGTTTGGCTGGGTGTTGGTTTTTGTTACTGTGT
TGGATGGAGCGGACACGGAGGTGGCCATGTACAGTATTTATGGAGAGCTG
GCATCCCAAGTATGTGTCCGCTCTCGCTGCATCCGCGATTTGTTTGTGTT
ACTAGTACATGTCCTAGCCCAGAGACGATTGAGTTTGGCGCCCGCCCTCT
TGGGGAGTTGGGGACCACCACGCTGTGGTCCCTGGGACGGGAGGGTGTAT
TTGAGCGATAGATGACCTCGTGCCCGAGTACGGCTGGGGCATCACTACCG
GCCCGGCGGGAGGGTCGTCTGAGGATAAGCAGGCCCCGCATGCGGCGTTG
CCGGGCCTCAGCCTTGACTGAGCCCCTGGGGAATGAGGCGGTGGGTGGTG
GCTTGATTTGCAAGGGCGGGTGGTGTCGGTGTTCCGCAGGGGGCACGGAT
TGGGCGCCGTTTGCGATAGCGGTTTGTTTCATGCTGCGTGTGGTAGCCTC
TGCTTGCGTGTCTGTGGTCTTTTTTTGCCGCCTGCTACGGGAGCAGGCCC
TCTGGCATGCTTCGCCGCCTTTGGGGCTGGTTTGGCTGGGTGTTGGTTTT
TGTTACTGTGTTGGATGGAGCGGACACGGAGGTGGCCATGTACAGTATTT
ATGGAGAGCTGGCATCCCAAGTATGTGTCCGCTCTCGCTGCATCCGCGAT
TTGTTTGTGTTACTAGTACATGTCCTAGCCCAGAGACGATTGAGTTTGGC
GCCCGCCCTCTTGGGGAGTTGGGGACCACCACGCTGTGGTCCCTGGGACG
GGAGGGTGTATTTGAGCGATAG back to top
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