mRNA_S-ischiensis_contig10.1609.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: A0A7S0J9X1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9X1_9EUKA) HSP 1 Score: 119 bits (299), Expect = 1.580e-26 Identity = 105/329 (31.91%), Postives = 149/329 (45.29%), Query Frame = 1
Query: 292 VMRVAMSCKSMYFAIAGAVEIWEFMVERERCPLAMALAQRYAGARGDRKVRAQKIRRAYREAHKATKLSHLEWHDVAVTGDT----VRKQEGHAAAALMGGRLIAVVGGWSSLTHIENDVTIADTANLP-------QRVTWHSAESVG-RPADLCPVYGMAVAAVAEDSFVVYGGLQYPGYKGDVNHLSLVRIT------QCNGGSR-------FLAEWRQPETGGESGFTPTSRGYPSVTHCTSAAGTPRSTSQLVVFGGIHQGAATAALEVL----DLTSMVWAAPKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGED 1191
V + CK ++ ++ + +WE ++ E L +R A + D Q R YR + KLS + WH V +G +R QEGHA A ++G R + VV G+ + I+NDV DT L + W S G RP YG ++AAV E + GG++Y GY+GDV L + + +GG A W + SR Y S+ +C + G L GGIH GAAT +++ L D W P+ +G P P FGHSA + S R+ V GGS+GSDLLR+G D
Sbjct: 3 VFKARRVCKRLW-SLGSDIGLWEALLSEEASGLGEEFKKRLAVVQMD----VQMYIREYRRVREVCKLSAMRWHKVHESGHARRGALRAQEGHAGA-MLGARWLVVVCGFGN--GIQNDVWAFDTTALDCAASGAGASLAWKRVPSAGLRPR---AKYGHSMAAVGEATLACLGGVRYGGYRGDVGDLHWLHVEPNVEAGDGDGGDAEEVATHSLRARWERAAVDEPCD----SRAYSSL-NCITLGGV----RHLFTLGGIHDGAATDSMQYLLISDDREESAWRTPEVSGQAPGPLFGHSAHWHERSSRLFVVGGSDGSDLLRDGND 311
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: A0A7S4F2H6_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F2H6_CHRCT) HSP 1 Score: 95.5 bits (236), Expect = 3.500e-17 Identity = 104/406 (25.62%), Postives = 156/406 (38.42%), Query Frame = 1
Query: 538 VRKQEGHAAAALMGGRLIAVVGGWSSLTH---------IENDVTIADTANLPQRVTWHSAESVGRPADLCPVYGMAVAAVAEDSFVVYGGLQYPGYKGDVNHLSLVRIT---------------------------------------------------------QCNGGSRFLAEWRQPETGGESGFTPTSRGYPSVTHCTSAAGTPRSTSQ---LVVFGGIHQGAATAALEVLDLTSMV-------WAAPKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGEDL--QDVWVLAGLDRGTSALAWSRVHPGGDLQ-RKQLG-RCHTAARVGPHLLFFGGHCRVSNKTVGLNLESMEWKQPGTV-------LGPLPPGRHAHAAVAVGRNLLVYGGW 1494
+R QEGHA A L L+ V G + + ++ D L QR+ ++ + YG +AAV+E++ GG+++ GY+GDV L + + + AEW E SR Y S+ +C G + L+ +GGI GAA+ +L+ L L + W P G GP RFGHSA + S+R+++ GGS+GSDLLR+G+D + V++L +W V GD+ K +G RCH + G + F G VS + L+L +PG V G P GR + V G +V+GGW
Sbjct: 153 LRAQEGHAGALLANRWLVVVCGFGHGIRNDVWVLDTWALDRVAASGDEPLLWQRLPLGGSKPRSK-------YGHTLAAVSEETLACLGGVRFGGYRGDVGDLHWLHVRAGEVCTDAPSKTDATADVSVGEDAAASVEGDNPDASTPADADAAAXXXXXXXXXXXXSASDVQSLRAEWESARLASECD----SRAYASL-NCVRVGGVAEKHAGGRCLITYGGISHGAASDSLQYLMLDADAEDGVLSGWTTPATVGEGPGIRFGHSAHWHEGSNRLVLVGGSDGSDLLRDGDDYHCRSVYLLRLGTADEPMWSWETVAVSGDVSVAKDIGGRCHLSFLAGDKIFLFAGGANVSGASGVLHLG-----EPGAVRCEASSAAGTPPSGRTSAIGVRAGPWFIVHGGW 541
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: A0A4D9CRU0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRU0_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.330e-11 Identity = 104/373 (27.88%), Postives = 141/373 (37.80%), Query Frame = 1
Query: 721 PVYGMAVAAVAEDSFVVYGGLQYPGYKGDVNHLSLVRIT-------------------------QCNGGS----RFLAEWRQPETGGES--------------GFTPTSRGYPSVTHCTSAAGTPRSTS---QLVVFGGIHQGAATAALEVLDLTSMVWA----------------APKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGEDL-QDVWVL--------------AGLDRGTSA-------------LAWSRVHPGGDLQRKQLGRCHTA---------ARVGPHLLFFGGHCRVSNKTVGLNL-ESMEW------KQPGTV---LGPL------PPGRHAHAAVAVGRNLLVYGGW 1494
PVYG + V+GG+ GY+GDVN L+ + GGS + A+ G ++ G TSR Y ++T + + + S +L++ GGIHQG A EVL V A P+ G P R GHS +++P V+V GGSNGSDLLRNG +L DV + GL R A L W P + GR HTA RV ++FFGG R+S+ L + E ++W K+ G PL P R +HA+V VG LLV+GGW
Sbjct: 178 PVYGHVCCPLGPRHVAVFGGVTMGGYQGDVNDFYLLELNFEEVSTHGLGSDGLNDKRGGVNASISIQGGSDKKGKSDADSSNRSPGTKTVCRSVRVLRPSVLLGQPLTSRAYATMTLLSRVDSSSPALSAPLRLLILGGIHQGQAILQPEVLTFLGAVEADGEMDRKGDAGSWEVTCPRIPGPEPSVRMGHSCSFLPRLGCVVVVGGSNGSDLLRNGRELLNDVSFILLEEEETQGSRRRGGGLGRPEKAKKRLLRPVCWKDPLYWGSRAPITE-HETFTGRTHTAHLLREDEGSGRVVSKVIFFGGDARLSDAVGLLEVDEVVQWVGGQKEKRKGDYKVGFSPLRSLTRRPSPRLSHASVLVGDTLLVHGGW 549
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: A0A7R9TBJ5_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TBJ5_9VIRI) HSP 1 Score: 73.6 bits (179), Expect = 7.460e-11 Identity = 100/294 (34.01%), Postives = 129/294 (43.88%), Query Frame = 1
Query: 520 AVTGDTVRKQEGHAAAALMGGRLIAVVGGWSSLTHIENDVTIAD---TANLPQRV-----TWHSAE--SVGRPADLCP--VYGMAVAAV--AEDSFVV--YGGLQYPGYKGDVNHLSLVR-ITQCN-------GG-----SRFLAEW-----RQPETGGESGFTPTSRGYPSVTHCTSAAGTPRSTSQLVVFGGIHQGAATAA--LEVLDL--TSMVW--------AAPKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGEDLQDVWVLAGLDRGTSALAWSRVHP 1263
A G T ++EGHAA L G + V+GG++ I DV + D A P R WH G + P VYG + + A+ S VV +GG++ GY G+V+ L +R T+ + GG S + E+ R E G P +RGY H A R + V GGI +GA+ A L LD+ S VW A + G PP RFGHS V S RVL+ GG NG DLLR G DL D W+ LA SR HP
Sbjct: 2 AAGGQTPSRREGHAAVNLDG--VAVVLGGFTDFG-IRADVHVLDLRRAAPTPGRHREFERAWHQVTLPQRGNANAVTPRNVYGHSAVTLRLADGSSVVVRFGGMRGGGYSGEVDDLEALRWATESHAPPPXPAGGQHASLSHYPLEFFEICARPDEVHG----WPPARGY----HAACADDIGR---VMYVSGGIAEGASLACNDLWALDVGAESGVWQWRRLVGDAGSEVVGEVPPARFGHS-MCVTSSGRVLLVGGGNGGDLLREGGDLHDAWLFD--------LAESRWHP 272
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: A0A7D9L848_PARCT (Kelch domain-containing 3 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L848_PARCT) HSP 1 Score: 62.8 bits (151), Expect = 6.020e-7 Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 1
Query: 1039 DLTSMVWAAPKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGEDLQDVWVLAGLDRGTSALAWSRVHPGGDLQRKQLGRCHTAARVGPHLLFFGGHCRV-----------SNKTVGLNLESMEWKQPGTVLGPLPPGRHAHAAVAVGRNLLVYGGWN 1497
D+ + W+ P+ +G+ PP R GHSA + E ++ V GG R+ +DV++L T + W+ H G Q HTA +G ++ FGG V N+ V + E+ W T G P GR +H+AVA GR + ++GG+N
Sbjct: 108 DINTFKWSMPEVSGSIPPARDGHSACVIGE--KIYVFGGFEE----RSECFSKDVYIL-----DTKTMKWTHPHVFG--QPASWRDFHTATAIGRYMYIFGGRGDVLGEEHSSEEIYDNQVVVFDTETYSWHWLLTK-GISPIGRRSHSAVAYGRCIYLFGGYN 257
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: W7TV29_9STRA (Flavin-binding kelch repeat f-box n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV29_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.490e-6 Identity = 62/218 (28.44%), Postives = 86/218 (39.45%), Query Frame = 1
Query: 721 PVYGMAVAAVAEDSFVVYGGLQYPGYKGDVNHLSLVRIT-----------------------QCNGGS----RFLAEWRQPETGGES--------------GFTPTSRGYPSVTHCTSAAGTPRSTS---QLVVFGGIHQGAATAALEVLDLTSMVWA----------------APKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGEDL 1194
PVYG + V+GG+ GY+GD+N L+ + GGS R A+ G ++ G TSR Y ++T + + + S +L++ GGIHQG A EVL V A P+ G P R GHS +++P V+V GGSNGSDLLRNG +L
Sbjct: 214 PVYGHVCCPLGPRHVAVFGGVTMGGYQGDINDFYLLELNFEEVSTHGLESDGLNGKRGGVNASNQGGSGKKGRSDADSSNSSPGTKTVCRSVRVLRPSDLLGQPLTSRAYATMTLLSRVDSSSPALSAPLRLLILGGIHQGQAILQPEVLTFLGAVEAEGEMGRRGDAGSWEVTCPRIPGPEPSVRMGHSCSFLPRLGCVVVVGGSNGSDLLRNGREL 431
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: A0A6A7G2S9_9CRUS (Uncharacterized protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G2S9_9CRUS) HSP 1 Score: 57.8 bits (138), Expect = 4.090e-5 Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 1240 LAWSRVHPGGDLQRKQLGRCHTAARVGPHLLFFGG----HCRVSNKTVGLNLESMEWKQPGTVLGPLPPGRHAHAAVAVGRNLLVYGGWN 1497
+ WS + P G + + CHTA VG GG H S++ V L++E W +P V+G +P R++H VA+G NL+++GG++
Sbjct: 129 MTWSCIFPSGPVPTHR--NCHTATVVGNKFYLLGGYGNQHTSKSSELVILDIEIRHWSRP-LVVGRVPAERYSHTCVAIGTNLILFGGFS 215
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: UPI000F551BD7 (kelch domain-containing protein 3-like isoform X2 n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F551BD7) HSP 1 Score: 56.6 bits (135), Expect = 5.440e-5 Identity = 52/182 (28.57%), Postives = 78/182 (42.86%), Query Frame = 1
Query: 988 VFGGIHQG-AATAALEVLDLTSMVWAAPKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGEDLQDVWVLAGLDRGTSALAWSRVHPGGDLQRKQLGRCHTAARVGPHLLFFGGHC-RVSNKTVGLNLESMEWKQPGTVL---------GPLPPGRHAHAAVAVGRNLLVYGGWNG 1500
+FGG + A L D S+ W+ PK G P R GHSA + ES + G + N + D T L W + G+ + + H+A VG ++ FGG R+ G + S + TV G +P GR +H+AVA G+++ V+GG+NG
Sbjct: 84 IFGGRNDTHGACNILYCFDTRSLTWSKPKVNGKPPAARDGHSACVI-ESRIYIFGGYEEEGECFSNSIEYLD----------TQTLTWHQPRVTGEPAKWR--DFHSATAVGTNMYIFGGRGDRLGQYHSGQEVYSSSVRVFDTVKNCWFKLNTSGNVPIGRRSHSAVAYGKHVYVFGGYNG 252
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Match: A0A3M6T4I7_POCDA (Uncharacterized protein n=6 Tax=Scleractinia TaxID=6125 RepID=A0A3M6T4I7_POCDA) HSP 1 Score: 56.6 bits (135), Expect = 5.870e-5 Identity = 52/182 (28.57%), Postives = 78/182 (42.86%), Query Frame = 1
Query: 988 VFGGIHQG-AATAALEVLDLTSMVWAAPKAAGAGPPPRFGHSATYVPESHRVLVAGGSNGSDLLRNGEDLQDVWVLAGLDRGTSALAWSRVHPGGDLQRKQLGRCHTAARVGPHLLFFGGHC-RVSNKTVGLNLESMEWKQPGTVL---------GPLPPGRHAHAAVAVGRNLLVYGGWNG 1500
+FGG + A L D S+ W+ PK G P R GHSA + ES + G + N + D T L W + G+ + + H+A VG ++ FGG R+ G + S + TV G +P GR +H+AVA G+++ V+GG+NG
Sbjct: 108 IFGGRNDTHGACNILYCFDTRSLTWSKPKVNGKPPAARDGHSACVI-ESRIYIFGGYEEEGECFSNSIEYLD----------TQTLTWHQPRVTGEPAKWR--DFHSATAVGTNMYIFGGRGDRLGQYHSGQEVYSSSVRVFDTVKNCWFKLNTSGNVPIGRRSHSAVAYGKHVYVFGGYNG 276 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1609.1 >prot_S-ischiensis_contig10.1609.1 ID=prot_S-ischiensis_contig10.1609.1|Name=mRNA_S-ischiensis_contig10.1609.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=500bp TPKEEWVGVGSPHFCWTMAPGVEVPARSSWGGIPPVCAMVKRAVMAQPVPback to top mRNA from alignment at S-ischiensis_contig10:3066627..3068126+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1609.1 ID=mRNA_S-ischiensis_contig10.1609.1|Name=mRNA_S-ischiensis_contig10.1609.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1500bp|location=Sequence derived from alignment at S-ischiensis_contig10:3066627..3068126+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3066627..3068126+ >mRNA_S-ischiensis_contig10.1609.1 ID=mRNA_S-ischiensis_contig10.1609.1|Name=mRNA_S-ischiensis_contig10.1609.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3000bp|location=Sequence derived from alignment at S-ischiensis_contig10:3066627..3068126+ (Schizocladia ischiensis KU_0333)back to top |