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Homology
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A835YR82_9STRA (GTP-binding nuclear protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR82_9STRA) HSP 1 Score: 395 bits (1016), Expect = 6.770e-137 Identity = 193/211 (91.47%), Postives = 200/211 (94.79%), Query Frame = 1
Query: 112 AQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDDL 744
A++PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEVRPL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVP WHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD NL FVEQPAL PPEFQ+D D +RFE ELEQAAA+PLPDEDDDL
Sbjct: 2 AEMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPYWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLMFVEQPALAPPEFQLDKADVQRFEQELEQAAAIPLPDEDDDL 212
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: D7G7A6_ECTSI (GTP-binding nuclear protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7A6_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 2.330e-135 Identity = 192/212 (90.57%), Postives = 200/212 (94.34%), Query Frame = 1
Query: 109 AAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDDL 744
A ++PEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKL GD NLQFVEQPALQPPEF I+ DQ +F+ E++ AAAVPLPDEDDDL
Sbjct: 2 AQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDANLQFVEQPALQPPEFVINQADQLKFQQEIDAAAAVPLPDEDDDL 213
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A7S3ZPZ2_9STRA (GTP-binding nuclear protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPZ2_9STRA) HSP 1 Score: 392 bits (1008), Expect = 4.760e-134 Identity = 188/220 (85.45%), Postives = 201/220 (91.36%), Query Frame = 1
Query: 85 RDKKTMAEAAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDDL 744
R T++ ++PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRG IKFNVWDTAGQE+FGGLRDGYYIQGQCAI+MFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLCGDNNL FVE PAL PPEF ID D R+EAEL +AA +PLP++DDDL
Sbjct: 99 RRASTLSATMEMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQERFGGLRDGYYIQGQCAIVMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLCGDNNLHFVEAPALAPPEFNIDAADAARYEAELREAANIPLPEDDDDL 318
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A7R9ZLZ6_9STRA (GTP-binding nuclear protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLZ6_9STRA) HSP 1 Score: 384 bits (987), Expect = 1.420e-131 Identity = 187/218 (85.78%), Postives = 199/218 (91.28%), Query Frame = 1
Query: 88 DKKTMAEAAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDD 741
D+ ++ +Q PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PLTFHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GDN L FVE PALQPPEF ID + R+EAE+ +AA PLP++DDD
Sbjct: 52 DQTQISNMSQEPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEFTIDEQTKARYEAEIAEAANKPLPEDDDD 269
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A1E7FMC8_9STRA (GTP-binding nuclear protein n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A1E7FMC8_9STRA) HSP 1 Score: 379 bits (973), Expect = 2.630e-130 Identity = 187/214 (87.38%), Postives = 196/214 (91.59%), Query Frame = 1
Query: 100 MAEAAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDD 741
MA+ A PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GDN L FVE PALQPPEFQ D N + ++E EL+ AAA PLP++DDD
Sbjct: 1 MADPA-TPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLNFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEFQFDENLKNQYEQELQAAAAQPLPEDDDD 213
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: W7TTE5_9STRA (GTP-binding nuclear protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE5_9STRA) HSP 1 Score: 377 bits (969), Expect = 9.930e-130 Identity = 183/209 (87.56%), Postives = 191/209 (91.39%), Query Frame = 1
Query: 118 VPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDDL 744
+PEFKLILVGDGGVGKTTFV+RH+TGEFEK+YVATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GDNNL FVE PAL PPE D ND R+E EL +AAA+PLPDEDDDL
Sbjct: 5 IPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A7S3P9E4_9STRA (GTP-binding nuclear protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9E4_9STRA) HSP 1 Score: 375 bits (962), Expect = 1.240e-128 Identity = 183/210 (87.14%), Postives = 193/210 (91.90%), Query Frame = 1
Query: 112 AQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDD 741
AQ+PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GDN L FV+ ALQPPE +I QR+ EA++ AAA PLP++DDD
Sbjct: 4 AQMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVQAVALQPPEVKISEEAQRQLEADINAAAAQPLPEDDDD 213
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A7S2CHG2_9STRA (GTP-binding nuclear protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHG2_9STRA) HSP 1 Score: 372 bits (954), Expect = 3.470e-127 Identity = 180/221 (81.45%), Postives = 196/221 (88.69%), Query Frame = 1
Query: 79 SRRDKKTMAEAAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDD 741
S + K VPEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL+FHTNRGA++FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKV+IKDRKVKAKQITFHRKKNLQY+DISAKSNY FE+PFLWLAK+L GD LQFVE PAL PPEF I D R+E EL++AAA+PLP++DD+
Sbjct: 8 SSKTKMAAQTGDYVPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLSFHTNRGALRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVDIKDRKVKAKQITFHRKKNLQYFDISAKSNYKFEQPFLWLAKQLVGDKKLQFVEAPALAPPEFNISTEDAARYERELDEAAAMPLPEDDDE 228
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A7S2RFE4_9STRA (GTP-binding nuclear protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFE4_9STRA) HSP 1 Score: 371 bits (952), Expect = 4.260e-127 Identity = 183/213 (85.92%), Postives = 191/213 (89.67%), Query Frame = 1
Query: 100 MAEAAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDD 738
M+ A PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKL GDN L VE PAL P+F ID + +RR+EAEL QAA PLP++ D
Sbjct: 1 MSAAQGSPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLSGDNQLTLVEAPALAVPDFDIDESTKRRYEAELAQAALEPLPEDSD 213
BLAST of mRNA_S-ischiensis_contig10.1605.1 vs. uniprot
Match: A0A7R9YMX6_DIALT (GTP-binding nuclear protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMX6_DIALT) HSP 1 Score: 366 bits (940), Expect = 3.640e-125 Identity = 176/212 (83.02%), Postives = 190/212 (89.62%), Query Frame = 1
Query: 109 AAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLTFHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAELEQAAAVPLPDEDDDL 744
AA VP FKL+LVGDGGVGKTTFVKRH+TGEFEK+YVATLGVEV PLTFHTNRG I FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDL RVCE IPIVL GNKV++K+RKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD NL FVE PAL PP+ +DP ++E EL + +AVPLPDED+DL
Sbjct: 12 AATVPTFKLVLVGDGGVGKTTFVKRHLTGEFEKRYVATLGVEVHPLTFHTNRGTIVFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLVRVCEAIPIVLVGNKVDVKERKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLTFVESPALAPPDVHVDPAQLAQYEKELAEVSAVPLPDEDEDL 223
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 394.0 |
| Seed ortholog evalue | 4.4e-107 |
| Seed eggNOG ortholog | 2880.D7G7A6 |
| KEGG ko | ko:K07936 |
| KEGG Pathway | ko03008,ko03013,ko05166,ko05169,map03008,map03013,map05166,map05169 |
| GOs | GO:0000003,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0009790,GO:0009792,GO:0009987,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0032501,GO:0032502,GO:0032504,GO:0044703,GO:0048468,GO:0048477,GO:0048609,GO:0048856,GO:0048869,GO:0051704 |
| EggNOG free text desc. | ribosome localization |
| EggNOG OGs | KOG0096@1,KOG0096@2759 |
| COG Functional cat. | A |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03009,ko03016,ko03019,ko03036,ko04031,ko04147 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | RAN, Ras superfamily GTPase |
| Ec32 ortholog | Ec-04_003550.1 |
| Exons | 7 |
| Model size | 984 |
| Cds size | 648 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815537.774083-UTR-S-ischiensis_contig10:3021298..3021397 | 1622815537.774083-UTR-S-ischiensis_contig10:3021298..3021397 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3021299..3021397 + |
| 1695739756.204357-UTR-S-ischiensis_contig10:3021298..3021397 | 1695739756.204357-UTR-S-ischiensis_contig10:3021298..3021397 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3021299..3021397 + |
| 1622815537.8936472-UTR-S-ischiensis_contig10:3029150..3029387 | 1622815537.8936472-UTR-S-ischiensis_contig10:3029150..3029387 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3029151..3029387 + |
| 1695739756.2977448-UTR-S-ischiensis_contig10:3029150..3029387 | 1695739756.2977448-UTR-S-ischiensis_contig10:3029150..3029387 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 3029151..3029387 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815537.787449-CDS-S-ischiensis_contig10:3021397..3021400 | 1622815537.787449-CDS-S-ischiensis_contig10:3021397..3021400 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3021398..3021400 + |
| 1695739756.2189896-CDS-S-ischiensis_contig10:3021397..3021400 | 1695739756.2189896-CDS-S-ischiensis_contig10:3021397..3021400 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3021398..3021400 + |
| 1622815537.8080094-CDS-S-ischiensis_contig10:3021975..3022090 | 1622815537.8080094-CDS-S-ischiensis_contig10:3021975..3022090 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3021976..3022090 + |
| 1695739756.2309403-CDS-S-ischiensis_contig10:3021975..3022090 | 1695739756.2309403-CDS-S-ischiensis_contig10:3021975..3022090 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3021976..3022090 + |
| 1622815537.8236449-CDS-S-ischiensis_contig10:3024453..3024571 | 1622815537.8236449-CDS-S-ischiensis_contig10:3024453..3024571 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3024454..3024571 + |
| 1695739756.239121-CDS-S-ischiensis_contig10:3024453..3024571 | 1695739756.239121-CDS-S-ischiensis_contig10:3024453..3024571 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3024454..3024571 + |
| 1622815537.8408885-CDS-S-ischiensis_contig10:3025613..3025743 | 1622815537.8408885-CDS-S-ischiensis_contig10:3025613..3025743 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3025614..3025743 + |
| 1695739756.2544265-CDS-S-ischiensis_contig10:3025613..3025743 | 1695739756.2544265-CDS-S-ischiensis_contig10:3025613..3025743 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3025614..3025743 + |
| 1622815537.853531-CDS-S-ischiensis_contig10:3026343..3026483 | 1622815537.853531-CDS-S-ischiensis_contig10:3026343..3026483 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3026344..3026483 + |
| 1695739756.2705045-CDS-S-ischiensis_contig10:3026343..3026483 | 1695739756.2705045-CDS-S-ischiensis_contig10:3026343..3026483 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3026344..3026483 + |
| 1622815537.8686807-CDS-S-ischiensis_contig10:3027792..3027868 | 1622815537.8686807-CDS-S-ischiensis_contig10:3027792..3027868 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3027793..3027868 + |
| 1695739756.2786124-CDS-S-ischiensis_contig10:3027792..3027868 | 1695739756.2786124-CDS-S-ischiensis_contig10:3027792..3027868 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3027793..3027868 + |
| 1622815537.8822982-CDS-S-ischiensis_contig10:3029084..3029150 | 1622815537.8822982-CDS-S-ischiensis_contig10:3029084..3029150 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3029085..3029150 + |
| 1695739756.2894542-CDS-S-ischiensis_contig10:3029084..3029150 | 1695739756.2894542-CDS-S-ischiensis_contig10:3029084..3029150 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 3029085..3029150 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1605.1 >prot_S-ischiensis_contig10.1605.1 ID=prot_S-ischiensis_contig10.1605.1|Name=mRNA_S-ischiensis_contig10.1605.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=216bp
MAEAAQVPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLT FHTNRGAIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNV PNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISA KSNYNFEKPFLWLAKKLCGDNNLQFVEQPALQPPEFQIDPNDQRRFEAEL EQAAAVPLPDEDDDL* back to topmRNA from alignment at S-ischiensis_contig10:3021299..3029387+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig10.1605.1 ID=mRNA_S-ischiensis_contig10.1605.1|Name=mRNA_S-ischiensis_contig10.1605.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8089bp|location=Sequence derived from alignment at S-ischiensis_contig10:3021299..3029387+ (Schizocladia ischiensis KU_0333) GCGGGGAGAGCACGGCGGACGCGATCGATTCCACGCAGCTGCGCGACCAG
AACCCCAGCCGCCCCCTGCCCCAGGAACTCTAGAAGAGACAAGAAGACCA
TGGTGCGCTTATGTTTTCCACACGCGGCTTAAGTCTGTAGCTATTCTAAT
ATGGAAAAGTGGGAGGGGATGGGCGCGGGTTTCCCTTTGTTCGTTGTGGA
CCTGGCTTTGATATTCGAAAACCGAGGACGAGGCCGTGGAGATCGCGACG
ATGGCTTTGGCTCCTGGGTTGAGTACAAAAACCTCGTCGTCTTGGGGGCA
TTGCGGCTCTTGCTTCGTGGCGCGCCCCCCTCACGGATACGATTCTTTTT
CTTGTGGCCGGCCCGGTCGCGGATAGCAGCTGCGAGGGTTTAAGACCATC
GCATCGCGTGCTGGGGTTCACGTGGAAGGATTCGAGCCCTCAAATGCAGG
ATATGCATCCCTCCAAGCCGCGGTAGAGTATGTTGCCAGGCGGCTCACTT
TGGTCGGAGGTAGCGCCCACGAAGAAGCATGTTTTTTTTTCCTGAGCCGT
AGTTGTGACACAGCCATGACCACGGTTGTTTCGGATCAGGGGCTCCCACT
TGTTCTCTGCACGGAGCCCGTGGTTTTCTGGAACCTGTTTTTTTTATCCT
GGTGACCCACGTTTACCCGTGCGACAGGCGGAGGCGGCGCAAGTGCCAGA
GTTCAAACTCATCCTTGTCGGGGATGGTGGCGTGGGCAAAACCACCTTCG
TCAAGCGGCACGTAACGGGGGAGTTCGAGAAGAAATACGTCGGTGAGTTG
CGCGCGCGGTATAGGTGACCCCCAGTTCACGGCACAGCCCATGGGAATTC
TCCCATGGCAAGCGCCCCTACAATGACATGGGCACTGCCGCTGTACTTGC
CGGGCAGGCAGCCCTCGGTGCACCTTTGGACCTGGCGACTAAGGTTGAAG
GGATGTTGGGGAGTGAATTCTATTTGCCTTCCAAAGGCAGCCTCGGGAGC
GGTGTCCGCTGTGCCTCTTCCAAAGACTGGGTGCCCCTCTTTGCGAGCAC
GCCGACCACAATTATACCGCTCGTTCACAGGGAAGGAGGGAGGGGTGTGA
ATTGTCGCTTTGTCTCCTTCCTGCCTCTCCGTGGAGCTCTTTTTGCGATG
CAGATGGCGAAAAATTGAGTTAAGGGAACGTGCGTGCGGCGCCTTGGCAC
ACTCCCATCAGCCTGCACCAGCGACGCACACGTAACCTACACCATCATCC
CTTCCCGGGTTCGGTGGCGAGTGGCCCCCTTGTGTGGCGGCGTTAGTCGG
AGCACACAGACTGCCCTCGACGGTGTCACCAGCGAAACCGCCATTTGCTA
ACTGTCTGCGCCCGCGGCCCAGGCTTTGCCCGTAAGTATGAACTTTTGGC
GTTCCGCGCGAACCGCTGGAACGCACCCGCGAGCTGTTGGCAATAAAAAA
GCTTCCGTGAAGAAGCACTTGTACTGCTTTCTGGAGCCAGCTGGACCACG
CCTACATAGTAATTGCGAGCGAAACGAGGTGTTGTGGCTTCTTTTTTTTT
TCCGGTGCGCTTGCATGAGACCTTTGTGTCGGCGGCGGGGCTAGCGCGGT
CCCGACGGCGTACCCGAAGGCCAGGGAGAACAGGAGGGTTCTTCGTGTTG
ACCGCCGTATGTTCCCCCCACGCACGGCAGGCCCTTGGCCCATGTTGTGG
ACGGGGGCGTCATGCGCACGCTCCGCTGCTGCAGTTGAGAGAGCATGCGC
GCAACCGACGCGTGACATGCCACTCTACAATACTTGTACAAGTACAGCAG
CTGGAAGCTGCTTCAAAGTATAAATTGTATTTATCCTACCGTAGGTACAT
ACCAACAAGTGCATCCAGGCAAAGCAGGACCTACTTGCAAACCACACTAC
TTTAGCACTTCAAGGTACTTCAAATCACGTACTCTACTCTACTGCTGTAG
TACGTACTTGTGCAAACGTGGAAGAAGATCTGTACTTCCAAGTACAGCGG
TGCATGCACTTGGACGCCCAGTCATGACTTATCTTACAACATTTTTTGTC
TCACCGTGCGCGCATAGTAGGAGAGCCCAAAGTTAACCTTTGGGTTTGCG
GTCCTGCAGGAGTAGCATTTAGCCATTTACTCTCAATTCTGCTCCGTCTC
GATCGAGGCGCGTGGTCAATGGTCTCGGGACTACGGCAAGCTCAACGTGA
GTACATATTCGTATGAATACTCTCAACTATACATGCATGGATATGGTCAA
ACCATTTGAGGACAACTAACCATACCATATTGTTAAGTTGAAACTTCGGG
TTTGCCCTCCTGCAGGAGTAGCATTTAGCAATGGACTCTCGCGTCCCGAG
TAAGTACGTAGACCGGGACGGAGCGTGTCGGGTTTGCGCCGGTACAGTGT
ATACTCGAGTATATATATATGTATATGTATATATATATATATATATACCC
GCGCTGTGCTTGCCGTAGTCCCGAGACTAGGCAAGCTCAACGTGAGTACA
TATTTGTATGAATACTCTCAACTATACATGCATGGATATGGTCAAACCAT
TTGAGGACAACTAACCATACCATATTGTTAAGTTGAAACTTCGGGTTTGC
CCTCCTGCAGGAGTAGCATTTAGCAATGGACTCTCGCGTCCCGAGTAAGT
ACGTAGACCGGGACGGAGCGTGTCGGGTTTGCGCCGGTACAGTGTATACT
CGAGTATATATATATATGTATATGTATATATATATATACCCGCGCTGTGC
TTGCCGTAGTCCCGAGACCATTGACCACGCGGCTCGACCGAGACGGACCA
GTCCCCTCCCTCCCCTTGCAGAGCCAGGGCGGGAGGGGGGGGGCACTGGC
GGAGGGGTGGCCATTTCCATACCCCCCCCCGTCCCTGACTATCGAGAGTC
AGGACAGTGTGCGTACTGTACATGAATCTTGGATTTTGCTCGGCGGGTTT
GGGGCCCTGCCCCCAGGTCTGTTTTGCGGCCCGCCGGCAGCTTTGCTGTG
TGCTGTGGTGTGTGCTGTACAGTAGAGCCGTAGAGATACTGTCGCAGAGC
TCCCAGCGATGCCCCCACCGGTGTGGGCAGAACAACAAGTGACATACCAT
GTACGCGCCCCTGGGCTTTGCCCCCCGGCTGTCCTTCCCCCCTTTGCCGC
CGCAGCAACCCTGGGTGTGGAGGTGCGCCCTCTGACCTTCCACACCAACC
GCGGGGCCATCAAGTTCAACGTCTGGGACACGGCCGGGCAAGAGAAGTTT
GGGGGCCTCCGGGACGGATACTAGTGAGTCATTATCGCCGTCACAGTGTG
CCTGCCCTGCCCTGCCCCGCCCGTGCTCGCTAGCCAGCCCTGAGCCCCGA
AGCGGGGTTGGGATGGCGCGCCGTGTTTTTTTCGGCGGGGAGGCAAGAAC
TGTCTGCGTTGTGGAGCAGAGCTAGTACTTGGAAGTGCTCAGTCGTGCGG
TACGAGTGCACGGAAGGACACAAACACATTGATACTACTGCTGCACTGTA
CTCTAGTAGAGTGCACTTCTTCGGAGGTACTGTACTGTAGTTCTTGGAAG
TACGTCGTTTTCTTCTTGCCTCTATGGTGATAGTATGCGGCCTTCTTCCC
TCTCATGTGCGCGGTGCAGGCGCTGATGTCGTGCCTCCCGCAGCCTGAGC
TTCCGGCTGTGTTCTTTTGGCGCGTTGTTTCGGCTCGCTTCCTGTTGGGC
TCTCGTTTGTGTACTAGCAAGCGGCGTGAGCTTGCATTGCCCGTCCATGG
CCGCTACGTGTTTGTGTGTACCTGCAACCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCCCCTCCCCCTCCTCCTCCCCCTCCCCTTCTCCTCCTCCTCC
TCCTCCGCCTCCTCCTCCCCCCCCCCCTCCCCCCCCCCCCCCTCCTCCCC
CtCCCCCTTACTCCCCCGTCCCCACTTCCCGCCTCGCTGACTGGTCTTCT
ACTCCGAAGTACTTTGCGAGAAAGGACGCGGCTGGCCCACTGCTGCGGTC
ATAGGTCATTTTATTGGTGGCGTGGAGTAGAGCTTGTCTCGCTGGTTTCA
TTCTCCAATACAATACCGTCACTTCCCGCACAAACCGTAAATTGCTACTC
GAACTGTACAGTACGTCGAAGCATGCACAGGACACGGGGCTACCCTGTCG
ACGCGAGTACATCCTTCGAAGTATATCTGGTACTGGACGAGTACACTACT
GTAGGAGGACTCCACTGCACTGTCTCGTCTCCTCGCTAACGCAACCTCCC
CACCCCTCGCCCGGCAACTGCGCGCGCGCGTGCCTCGCCGGTTGCTTTCC
GTCGCGGCCCCGCAGCATCCAGGGGCAGTGCGCAATAATTATGTTCGACG
TAACAAGCCGAATCACGTACAAGAACGTGCCTAACTGGCACAGGGACCTG
ACGCGCGTGTGCGAGAACATCCCCATCGTCCTCACGGGGAACAAGGTGTG
TGAGCAGCGCGACATCTATCGCACCTATACTTGCAGGTTTCGCTTGGGCC
CCGCTTGCGTGGGCTGCATGCGCCCCCGCCCCCCCCCTGTTTCGTGGGAG
CTCCTCCGTGTGACTCATGTTGGAATTGCTGCTTAGGTAGTGTGTTGGGA
GGGCCCTCCACGCAAGTCGCTTGTCTTGGCCCGTTAGTGCATTGTGATGT
GCTGTTACTCAAACTTTGCTTGCCATGCTTGTACTAGTACTTCGAAGCGG
TCCCGAGACCATTGACCACTAAGTATAGCGCCTCGGCCGAGAGTTTCGTA
GTCAATGGTCTCGGGCCTACGGCGATCACACGCGGGTGCATGTATCCCTT
TGCTAGTAGGCTTGGAAGGCCACACCGAGCACGCGGTTGGAAGCAAGGCG
GCATTCTGGCCCACGCTCAACACTGTGCTCGGCGGAGTTCTGCACCAAGT
ACGAAGTAGGTTTTTTATTGCCTACTTGCTACCAGCGGGCGGCACGCTGG
GCTGAGACCGAGGACTGACAGACTGCCAGCGACCGCCGACCGACTGACAT
GACCGACCGACCGACGCGGCGCCGGCGGGAACGACGGCTTCCCAGGTGGA
GATCAAGGACCGTAAGGTGAAGGCCAAGCAGATCACCTTCCACCGGAAGA
AGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAACTTCGAG
AAGCCCTTCCTGTGGCTGGCCAAGAAGCTCTGCGGGTAAGTACTACAAGT
ACTTCTATAGTGAGTACTCGTATATGTGTAGTGAGTACTCACACACGGTA
GGTTTAGTTGCTTGAGAAGGGCTCCTGGGGGCAAAACCGCCGGGTAATTA
GGCGGGGGGTGCAGTAGCACGTTGCTCTCATTTCGTCGTGCAAGTAGCCG
GCCACGTGGCAGACGTGTGGGGCAGATGGGGTGCCGACCCAGCCGAAGCG
AAGCGGACTGCGTTTGTTGTACCTCATTACAAGTTGTTGCGAAGTATATG
AATCACCGTCCATGTGTTGTTATGCTTTGTGGCGGCCTTGGCGGGGATTC
CTCGCGCTGTGCTGCACTGTTCACGACGAGCCTGGCGCCGCCTGCCTCGG
TAGGTGAGAATTAGCGGCGCTTGTAGCGAGTTGAAACCCCATGGAGGCGT
ACTGTGGCGTGAGCACTATCACCTGAAGTGCCCGATTTCGAATCGGCATT
CGCACCGTACTAGGGCCGGTACCCGTACAGGTACAGTTACAGGTACGTGT
AATTCCCTGCCTGCTGTAGGTAGGGGAGGGCCCTTCGGGAGGGCCCCTCC
CCTACACCACATCTTATAAAGTTACTTTCAAGCTCCTGTACTCCGCATCG
AACGGAACAGAGCTTGCCGTTGTCCCGAGACCGTTGTGCTGAGCGTCTCC
CAGTATGTAGTTGCTTCGGAGATCGAGTTTCGTAGTGAAAAAAGAGTTGG
CTTCAAAACGCCCCGAGTGGTTGGGAGACTGCGCTGTGCAGTACTGTTCT
GCGCTGTAGTTGGCAGTACTGTAGAGTACTCGCGTACTGTACCGTAGGTA
TTTACTCACGACTGCTCCGCCCTCGACGACACGTGGTCCGTGGTATCTGG
ACCACGGCACACACAATGCGGAGTACTACTACAGTACTACTAGTGGTACT
CGTATATACACAGTCGGGCCTAACAGAGCTTGCGGGTAGGTCCCGAGACC
GTTGCCCGCAATGTCCAAGCAGTGAAGGAGCGAGTCTCGAATACCCCAAG
CAGTTTGGAGACTTCGCTTTCCAATACTTTTGAGTACGGTACTTCAAACT
ACTCAGGTGGTTGGGAGAATGAGTTTCACGTAGCCCGAGCAGTTGCTAGT
AACTTAGGAGACGTCGTTTCGAAAATATCCAAGCAGCTACTTAGGAGACT
ACAGCTGGAAGTACAAGGCTCCAAAGGGGCGTGGACCGCCCCCGCCCCCC
GGCGTCACACCCGCTGTGCTGACTGCGCTTTCCCCGGTGCCCGCCGCCCG
GGCCGCCCGTTGCTCCCGTGTCTCCGCCGTTTCTCTTGCGGCAGCGACAA
CAACCTGCAGTTTGTGGAGCAGCCGGCCCTTCAGCCGCCGGAGTTCCAGA
TCGACCCAAACGACCAGCGGGTAAGTTTAGAGCGAGGGCGTGCCTCTTCT
TGCCCCCTCCCCCTCCCCTTCCCTCCCCGTCTCCCTTCCCTCCCTACCGT
GGTCCCCTGACGCCAGCGGGGGGCGAAAATGGAGGGAAGGAGGGAGGGAG
GGAGGGATGGAGGGAGAGCAATCCAGTGGAAGCGGCCGCTGGGTTGCAGC
GTCAATGTGAAGCCGAGAGTGCCCTATTGGGCGCTGTTGCCTGTTTTTAC
GTGTTCTTCCCTGTGCATTATGTTCCCCGCCAAGGGGGAGCGTGTCGCTC
ACGCGGGCGCGTCGTCGTGCCTGGCTGCCCGTTCGTGCCCGTTCCTGGCC
CTGGCCCATGTGTTTGTGACGGGGCGTGTCCCGTAAGTGCAGAACAATAC
AATTTATATGAATTACCAGAACACGCGTTTGCGCTTTCCATGGATGTATT
TCAAGTACAGCATGGTACAGTAGTGCTGTGCCCGTGCTGCTAAATATGCT
GTGAAGCGCTGAACTCGCGTAGTAGAGTACTGTAGTGCTTGAGCAGTACG
ACTGTACTTCCAAGTATGTGCTTCCGGAAGTAGGTCCTCGGAATGAATGT
GCGGCATCTATTACTGTACTTCCAGTAGTAGGGATCTCTCACAGACCAGC
CCGCAGTGCACTTGCGAGACCAAGTAGTGTGTCTCTGACCCCTGCCTCTG
GTTGTGTCACCACGCACCCCCCTCTGCCCCCACCCCTCCGACCCCCTACT
GGTGCGTGCCGCTCGGGGCCCGTGCATTGTAGCTCGCGCCCCCCTTTTTG
TTTTGTATTCTTTGATGTGATACCACTACCCATTCCTCTCCCTCCTTTTT
CCCCCCCCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCCCCTCTTCCTC
CCCGTCCACCTCCCCTTCCCCACACAACTTTCCCCTGGCGAGCTAAGGAA
GGACCATTGTTGAGGTCTCTAGTGACGTGGCCCGCACCTTGCCCCGTGTT
GTTCCTTGAAATACTGTAGTACTCGAGTACGAGAACACTCAGTTCTTTAG
TGGGATAACTACTAGTATGAGAACACTCAGTCTCAGACGGGTGCGATTGT
ACCTCGTTGCAATTTTTTTGCACGAAGACCAACAAGCGAGTGGGAAATAA
GAGGTGTCCCTCCCTACAATTTATATGAACCACACGTCCCCACGCTTGAC
CACGTGCCCCCCCTGGTGATCTTTGTCGTTCGCCAGCGCTTCGAGGCGGA
GTTGGAGCAAGCCGCCGCCGTGCCGCTCCCGGACGAGGACGACGACCTTT
GAAGCGAGCGAGCGTCCATCCCGCGAGGGCCGGCGGAATGTACCACCACG
TACTACAAGTACCTAGCGGCAGGGCCTGGCGTGCATGCAGGTCGGCGGCG
GCTGCGGCGGCGGCGGTGGCGGCGGCAGCGTAGGCACAGGGGACGTAGCA
GCACAAGTGACAAGTGGGGGTTGGGACGCGGGGCGACATGAGGGCCACTG
CCGCCGCCTCCGCCACCGCGTGTCTGCTGCTGCTGCTGT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig10:3021299..3029387+ >mRNA_S-ischiensis_contig10.1605.1 ID=mRNA_S-ischiensis_contig10.1605.1|Name=mRNA_S-ischiensis_contig10.1605.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1296bp|location=Sequence derived from alignment at S-ischiensis_contig10:3021299..3029387+ (Schizocladia ischiensis KU_0333) ATGATGGCGGAGGCGGCGCAAGTGCCAGAGTTCAAACTCATCCTTGTCGG GGATGGTGGCGTGGGCAAAACCACCTTCGTCAAGCGGCACGTAACGGGGG AGTTCGAGAAGAAATACGTCGGCGGAGGCGGCGCAAGTGCCAGAGTTCAA ACTCATCCTTGTCGGGGATGGTGGCGTGGGCAAAACCACCTTCGTCAAGC GGCACGTAACGGGGGAGTTCGAGAAGAAATACGTCGCAACCCTGGGTGTG GAGGTGCGCCCTCTGACCTTCCACACCAACCGCGGGGCCATCAAGTTCAA CGTCTGGGACACGGCCGGGCAAGAGAAGTTTGGGGGCCTCCGGGACGGAT ACTACAACCCTGGGTGTGGAGGTGCGCCCTCTGACCTTCCACACCAACCG CGGGGCCATCAAGTTCAACGTCTGGGACACGGCCGGGCAAGAGAAGTTTG GGGGCCTCCGGGACGGATACTACATCCAGGGGCAGTGCGCAATAATTATG TTCGACGTAACAAGCCGAATCACGTACAAGAACGTGCCTAACTGGCACAG GGACCTGACGCGCGTGTGCGAGAACATCCCCATCGTCCTCACGGGGAACA AGCATCCAGGGGCAGTGCGCAATAATTATGTTCGACGTAACAAGCCGAAT CACGTACAAGAACGTGCCTAACTGGCACAGGGACCTGACGCGCGTGTGCG AGAACATCCCCATCGTCCTCACGGGGAACAAGGTGGAGATCAAGGACCGT AAGGTGAAGGCCAAGCAGATCACCTTCCACCGGAAGAAGAACCTCCAGTA CTACGACATCTCCGCCAAGTCCAACTACAACTTCGAGAAGCCCTTCCTGT GGCTGGCCAAGAAGCTCTGCGGGTGGAGATCAAGGACCGTAAGGTGAAGG CCAAGCAGATCACCTTCCACCGGAAGAAGAACCTCCAGTACTACGACATC TCCGCCAAGTCCAACTACAACTTCGAGAAGCCCTTCCTGTGGCTGGCCAA GAAGCTCTGCGGCGACAACAACCTGCAGTTTGTGGAGCAGCCGGCCCTTC AGCCGCCGGAGTTCCAGATCGACCCAAACGACCAGCGGCGACAACAACCT GCAGTTTGTGGAGCAGCCGGCCCTTCAGCCGCCGGAGTTCCAGATCGACC CAAACGACCAGCGGCGCTTCGAGGCGGAGTTGGAGCAAGCCGCCGCCGTG CCGCTCCCGGACGAGGACGACGACCTTTGACGCTTCGAGGCGGAGTTGGA GCAAGCCGCCGCCGTGCCGCTCCCGGACGAGGACGACGACCTTTGA back to top
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