mRNA_S-ischiensis_contig10.1593.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1593.1
Unique NamemRNA_S-ischiensis_contig10.1593.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: D7G592_ECTSI (Peroxisomal membrane protein PEX14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G592_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 4.210e-20
Identity = 55/111 (49.55%), Postives = 66/111 (59.46%), Query Frame = 3 
Query:   54 MREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARVEGRQQQKDGGDSSSDVTDAWGPAPGPAPQPLEAEPEVPLWRRLAVPGALILGGAGAAYAYRAAS 386
            MREDQ+ NGV FL HP+ KTAPLSQR+SFLE KGLT EEIS AL+R EG +       +  +                 AE  +PLWR++AVPG L +G  GA   Y AAS
Sbjct:    1 MREDQIVNGVNFLVHPKAKTAPLSQRISFLENKGLTAEEISAALSRAEGGEDSNGSATAGGNSXXXXXXXXXXXXXAFPAEASIPLWRQVAVPGVLAMGAVGALGTYYAAS 111
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: A0A836C861_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C861_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.880e-17
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = 3 
Query:   54 MREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARVEGRQQQKDGGDSSSDVTDAWGPAPGPAPQPLEAEPEVPLWRRLAVPGALILGGAGAAYAYRA 380
            +RE QV++GVKFL+HPQV+ +PLSQR+SFLEKKGLTPEEISEA+ R         GG S++D        P     P       PLWR+L +PGAL+  G G   A RA
Sbjct:    2 VRESQVESGVKFLSHPQVRASPLSQRISFLEKKGLTPEEISEAMTR------SGVGGFSAADD-------PHLTASPTGDSDSDPLWRKLLLPGALLAAGLGVVGATRA 97
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: W7TUV2_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUV2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.600e-14
Identity = 63/164 (38.41%), Postives = 83/164 (50.61%), Query Frame = 3 
Query:   39 SATGGMREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARVEGRQQQKDGGDSSSDVTDAWGPAPGP-----------------APQPLEAEPE-VPLWRR---LAVPGALILG---GAGAAYAYRAA----------SPPQAIQRSGTEQVS 428
            S T  +RED + NGV FL HP V+ APLSQR++FLEKKGLT EEI+EA  R       K+G +SS     +  PA                    A +PL + PE V +W +     VPGA++ G   GAG  + YR +          SPP    +SGT ++S
Sbjct:   15 SGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRA------KNGLESSLPFHSSSTPANNTXXXXXXXXXXXXXXXXXATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYRPSRRPFKPKLKLSPPWLKPQSGTGRIS 172
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: K8YR87_NANGC (Peroxisomal membrane protein PEX14 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YR87_NANGC)

HSP 1 Score: 73.6 bits (179), Expect = 7.210e-12
Identity = 56/137 (40.88%), Postives = 72/137 (52.55%), Query Frame = 3 
Query:   39 SATGGMREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARVEGRQQQKDGGDSSSDVTDAWGPAPGP-----------------APQPLEAEPE-VPLWRR---LAVPGALILG---GAGAAYAYR 377
            S T  +RED + NGV FL HP V+ APLSQR++FLEKKGLT EEI+EA  R       K+G +SS     +  PA                    A +PL + PE V +W +     VPGA++ G   GAG  + YR
Sbjct:   15 SGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRA------KNGLESSLPFHSSSTPANNTXXXXXXXXXXXXXXXXXATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYR 145
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: A0A367J7G4_RHIAZ (Peroxisomal membrane protein PEX14 n=5 Tax=Rhizopus TaxID=4842 RepID=A0A367J7G4_RHIAZ)

HSP 1 Score: 70.9 bits (172), Expect = 8.480e-11
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 3 
Query:   54 MREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARVEGRQQQKDGGDSSSDVTDAWGPAPGPAPQPLEAEPEVPL-----WRRLAVPGALILGGAG 359
            MRED + + + FL+ P+V++APL+++VSFLE KG+T EEI EA+ARV G+         ++  T    P PG    P    P VP      WR + +  A++ GG G
Sbjct:    1 MREDLISSAISFLSDPKVQSAPLAKKVSFLESKGMTSEEIEEAMARVNGKSAAV-----TTTTTTVGNPQPGTVMYPAAVPPPVPTRPSYDWRDIFI-AAVLAGGVG 101
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: A0A426ZVU7_ENSVE (Peroxisomal membrane protein PEX14 (Fragment) n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZVU7_ENSVE)

HSP 1 Score: 68.9 bits (167), Expect = 1.370e-10
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 3 
Query:   27 ADE*SATGGMREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARV 194
            A+E      +REDQVQN VKFL+HP+V+++P+  R SFLEKKGLT EEI EA  RV
Sbjct:   27 ANEFLGNPSLREDQVQNAVKFLSHPKVRSSPVVHRRSFLEKKGLTKEEIDEAFRRV 82
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: A0A453DQJ8_AEGTS (Peroxisomal membrane protein PEX14 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453DQJ8_AEGTS)

HSP 1 Score: 66.2 bits (160), Expect = 1.650e-10
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 3 
Query:   42 ATGGMREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARV 194
            A   +RED VQN V FL HP+VK +P+S R SFLEKKGLT EEI EA  RV
Sbjct:   30 APQAVREDYVQNAVNFLAHPKVKGSPVSYRYSFLEKKGLTKEEIDEAFRRV 80
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: I3SRC3_LOTJA (Peroxisomal membrane protein PEX14 n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SRC3_LOTJA)

HSP 1 Score: 67.8 bits (164), Expect = 1.890e-10
Identity = 33/50 (66.00%), Postives = 39/50 (78.00%), Query Frame = 3 
Query:   45 TGGMREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARV 194
            T  +REDQ+QN VKFL+HP+VK +P+  R SFLEKKGLT EEI EA  RV
Sbjct:   51 TEPLREDQIQNAVKFLSHPKVKGSPVIYRRSFLEKKGLTKEEIDEAFRRV 100
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: K3XB39_GLOUD (Peroxisomal membrane protein PEX14 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB39_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 2.260e-10
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 3 
Query:   54 MREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARVE 197
            MRE+ V+NGVKFL HP V+T PLS+RVSFLE+KG+T EEI EA+ R +
Sbjct:    1 MREEMVENGVKFLRHPNVQTTPLSERVSFLEQKGMTKEEIQEAIERYQ 48
[Close]
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Match: UPI001016A8A2 (peroxisomal membrane protein PEX14-like n=1 Tax=Vigna unguiculata TaxID=3917 RepID=UPI001016A8A2)

HSP 1 Score: 66.2 bits (160), Expect = 2.980e-10
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 3 
Query:   54 MREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARV 194
            MRE+Q+QN VKFL+HP+V+ +P+  R SFLEKKGLT EEI EA  RV
Sbjct:    1 MREEQIQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFRRV 47
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G592_ECTSI4.210e-2049.55Peroxisomal membrane protein PEX14 n=2 Tax=Ectocar... [more]
A0A836C861_9STRA4.880e-1750.46Peroxisomal membrane protein PEX14 n=1 Tax=Tribone... [more]
W7TUV2_9STRA9.600e-1438.41Peroxisomal membrane protein PEX14 n=1 Tax=Nannoch... [more]
K8YR87_NANGC7.210e-1240.88Peroxisomal membrane protein PEX14 (Fragment) n=1 ... [more]
A0A367J7G4_RHIAZ8.480e-1139.25Peroxisomal membrane protein PEX14 n=5 Tax=Rhizopu... [more]
A0A426ZVU7_ENSVE1.370e-1060.71Peroxisomal membrane protein PEX14 (Fragment) n=2 ... [more]
A0A453DQJ8_AEGTS1.650e-1064.71Peroxisomal membrane protein PEX14 n=1 Tax=Aegilop... [more]
I3SRC3_LOTJA1.890e-1066.00Peroxisomal membrane protein PEX14 n=1 Tax=Lotus j... [more]
K3XB39_GLOUD2.260e-1066.67Peroxisomal membrane protein PEX14 n=1 Tax=Globisp... [more]
UPI001016A8A22.980e-1065.96peroxisomal membrane protein PEX14-like n=1 Tax=Vi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:2954455..2956173 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue3.8e-18
Seed eggNOG ortholog2880.D7G592
Preferred namePEX14
KEGG koko:K13343,ko:K16284
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
GOsGO:0000226,GO:0001650,GO:0003674,GO:0003712,GO:0003714,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0005886,GO:0006355,GO:0006464,GO:0006605,GO:0006625,GO:0006807,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007031,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010970,GO:0015031,GO:0015631,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016043,GO:0016558,GO:0016560,GO:0016561,GO:0016567,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0030674,GO:0030705,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0031903,GO:0031974,GO:0031981,GO:0032091,GO:0032446,GO:0032459,GO:0032460,GO:0032462,GO:0032463,GO:0032984,GO:0032991,GO:0033036,GO:0033365,GO:0034453,GO:0034613,GO:0036211,GO:0036250,GO:0042579,GO:0042802,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043393,GO:0043412,GO:0043433,GO:0043574,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044721,GO:0044743,GO:0045184,GO:0045892,GO:0045934,GO:0046907,GO:0047485,GO:0048487,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051090,GO:0051098,GO:0051100,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0055085,GO:0060090,GO:0060255,GO:0065002,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072384,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0098588,GO:0098805,GO:0099111,GO:0140110,GO:1901090,GO:1901091,GO:1901093,GO:1901094,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:1990351,GO:1990415,GO:1990429,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.peroxisome transport along microtubule
EggNOG OGsKOG2629@1,KOG2629@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Exons3
Model size708
Cds size654
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1593.1prot_S-ischiensis_contig10.1593.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 2954455..2956120 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815537.181908-CDS-S-ischiensis_contig10:2954454..29549201622815537.181908-CDS-S-ischiensis_contig10:2954454..2954920Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 2954455..2954920 -
1695739755.8086123-CDS-S-ischiensis_contig10:2954454..29549201695739755.8086123-CDS-S-ischiensis_contig10:2954454..2954920Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 2954455..2954920 -
1622815537.1946402-CDS-S-ischiensis_contig10:2955832..29559211622815537.1946402-CDS-S-ischiensis_contig10:2955832..2955921Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 2955833..2955921 -
1695739755.8191473-CDS-S-ischiensis_contig10:2955832..29559211695739755.8191473-CDS-S-ischiensis_contig10:2955832..2955921Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 2955833..2955921 -
1622815537.2113745-CDS-S-ischiensis_contig10:2956021..29561201622815537.2113745-CDS-S-ischiensis_contig10:2956021..2956120Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 2956022..2956120 -
1695739755.8270698-CDS-S-ischiensis_contig10:2956021..29561201695739755.8270698-CDS-S-ischiensis_contig10:2956021..2956120Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 2956022..2956120 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815537.2246244-UTR-S-ischiensis_contig10:2956120..29561731622815537.2246244-UTR-S-ischiensis_contig10:2956120..2956173Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 2956121..2956173 -
1695739755.8348796-UTR-S-ischiensis_contig10:2956120..29561731695739755.8348796-UTR-S-ischiensis_contig10:2956120..2956173Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 2956121..2956173 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1593.1

>prot_S-ischiensis_contig10.1593.1 ID=prot_S-ischiensis_contig10.1593.1|Name=mRNA_S-ischiensis_contig10.1593.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=218bp
MREDQVQNGVKFLTHPQVKTAPLSQRVSFLEKKGLTPEEISEALARVEGR
QQQKDGGDSSSDVTDAWGPAPGPAPQPLEAEPEVPLWRRLAVPGALILGG
AGAAYAYRAASPPQAIQRSGTEQVSDRPPPGGAPQAVWGGAGAAAEGAGV
GLGHLPPEGLAAAQGQAQVPGQGQGQGQGQEAVVGEARTGPDPEQQLSVF
GGSHVYPPPPAGGQGPAP
back to top

mRNA from alignment at S-ischiensis_contig10:2954455..2956173-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1593.1 ID=mRNA_S-ischiensis_contig10.1593.1|Name=mRNA_S-ischiensis_contig10.1593.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1719bp|location=Sequence derived from alignment at S-ischiensis_contig10:2954455..2956173- (Schizocladia ischiensis KU_0333)
CTCGGTATGAAATCAGACGCAGTCACGCAGATGAGTAGAGTGCAACGGGG
GGAATGAGGGAGGACCAGGTTCAAAATGGCGTCAAATTCCTTACTCATCC
ACAGGTCAAGACAGCACCGCTGTCGCAGAGGGTCAGCTTCCTTGAAAAAA
AGGTAAACGGCTCCCGTGATTCCCGCCCTAGAATGGGTATTTGCGTGCCG
TCGCCCCCCCCCCGTGTCTTAACATTTGGGTTCACTGCGCACGCACACCC
AGGGACTGACTCCTGAGGAAATATCCGAGGCCCTCGCAAGGGTGGAGGGG
CGCCAGCAGCAAAAGGATGGAGGTGATTCGAGCTCCGACGTGTGAGTGCC
CCCCGCACGCGCTTCTGTGTTGACGCCGAAAATCGTCAATATCAACTATT
AAATATTTCCCGCAATTTTCAATCAATATTCTATCAACGAATTGAATACT
GATTGATTTTTCGACTGTCAATCAATATTCAATAAAATTACTTCTTCATC
AATAAATCGTCGTTAATGGCTATCCGACGATCAACAATAGCCGGTAACGA
CTGTGTTGCATATGAATTGTTATCAAAATAATTCAAAAAATGTAAAAAGG
TACAGTCGCACATGTGCGAGATTGAGCTTTCAAAATAATTTTGGATGGCA
TGCGATTTTAGTGGTTTTCCCATTTAAGAATTGAACGTTCTCGGCTATCT
GGTGGGCGCTTGAAGTACCGTTGCCGGCTAGCGGGCATAACCAATCCCTG
TGAATACCGTTGCCGGCTACTTGTCAAGTAGAAAAGTGCACGATTTTAAT
GGGGAAAGTATTGATTGATCGCCGCGGCGATCCATATCAATGTCAATATT
GATCAAGAAGGGCTTCTGGTGAGGTCCCCACCTTAGGTTGTTGGGACGGG
GCCCGGAACTCGCATGCCATCAAAATAGTTTGAGGCAGGTGAAAAGACGG
GCTTCCGGGGATGGGGGACCCTGAACTCGCGTAAGTAGGAACACCTCTTC
TTTCCCACTCGCTTGTTTATCTTCATGCCAAAATTTAAGAATTGATCACT
ATTCAATATTTATTGAATACTGAAGTATCATGAGTCAACGTTTTGTTCAA
CACACAACTCTAGCGTCGTCGCGCCGGCCCCCCGCGCGCGCTCCCCCGCC
GCCGCCTGTGACAGCCACGCGCTTCCCTCCGCCACCCCTCAGCCCACACC
TTCGCTAGCAAACCTAAACCTCACAACCCTGAATACCATTCGTACCCTAC
CAGGACGGATGCCTGGGGGCCGGCTCCGGGCCCAGCGCCGCAACCCTTGG
AGGCGGAGCCTGAGGTGCCGCTGTGGCGGAGGCTGGCCGTCCCGGGCGCT
CTCATCCTCGGGGGTGCCGGAGCGGCCTACGCCTACAGGGCCGCGTCGCC
GCCCCAGGCCATTCAGCGCTCGGGGACAGAGCAAGTCTCTGATCGGCCGC
CGCCCGGGGGGGCTCCCCAGGCCGTCTGGGGGGGCGCCGGCGCGGCGGCG
GAGGGCGCAGGAGTCGGCCTCGGCCACTTGCCCCCGGAAGGGCTAGCGGC
GGCCCAGGGACAAGCCCAAGTCCCCGGGCAGGGCCAGGGCCAGGGCCAGG
GCCAGGAGGCGGTTGTGGGGGAGGCGCGGACAGGCCCGGACCCGGAGCAG
CAGCTTTCCGTTTTTGGGGGCTCACATGTCTACCCGCCGCCACCGGCCGG
GGGCCAGGGCCCGGCGCCC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig10:2954455..2956173-

>mRNA_S-ischiensis_contig10.1593.1 ID=mRNA_S-ischiensis_contig10.1593.1|Name=mRNA_S-ischiensis_contig10.1593.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1308bp|location=Sequence derived from alignment at S-ischiensis_contig10:2954455..2956173- (Schizocladia ischiensis KU_0333)
ATGAGGGAGGACCAGGTTCAAAATGGCGTCAAATTCCTTACTCATCCACA
GGTCAAGACAGCACCGCTGTCGCAGAGGGTCAGCTTCCTTGAAAAAAAGA
TGAGGGAGGACCAGGTTCAAAATGGCGTCAAATTCCTTACTCATCCACAG
GTCAAGACAGCACCGCTGTCGCAGAGGGTCAGCTTCCTTGAAAAAAAGGG
ACTGACTCCTGAGGAAATATCCGAGGCCCTCGCAAGGGTGGAGGGGCGCC
AGCAGCAAAAGGATGGAGGTGATTCGAGCTCCGACGTGGACTGACTCCTG
AGGAAATATCCGAGGCCCTCGCAAGGGTGGAGGGGCGCCAGCAGCAAAAG
GATGGAGGTGATTCGAGCTCCGACGTGACGGATGCCTGGGGGCCGGCTCC
GGGCCCAGCGCCGCAACCCTTGGAGGCGGAGCCTGAGGTGCCGCTGTGGC
GGAGGCTGGCCGTCCCGGGCGCTCTCATCCTCGGGGGTGCCGGAGCGGCC
TACGCCTACAGGGCCGCGTCGCCGCCCCAGGCCATTCAGCGCTCGGGGAC
AGAGCAAGTCTCTGATCGGCCGCCGCCCGGGGGGGCTCCCCAGGCCGTCT
GGGGGGGCGCCGGCGCGGCGGCGGAGGGCGCAGGAGTCGGCCTCGGCCAC
TTGCCCCCGGAAGGGCTAGCGGCGGCCCAGGGACAAGCCCAAGTCCCCGG
GCAGGGCCAGGGCCAGGGCCAGGGCCAGGAGGCGGTTGTGGGGGAGGCGC
GGACAGGCCCGGACCCGGAGCAGCAGCTTTCCGTTTTTGGGGGCTCACAT
GTCTACCCGCCGCCACCGGCCGGGGGCCAGGGCCCGGCGCCCGACGGATG
CCTGGGGGCCGGCTCCGGGCCCAGCGCCGCAACCCTTGGAGGCGGAGCCT
GAGGTGCCGCTGTGGCGGAGGCTGGCCGTCCCGGGCGCTCTCATCCTCGG
GGGTGCCGGAGCGGCCTACGCCTACAGGGCCGCGTCGCCGCCCCAGGCCA
TTCAGCGCTCGGGGACAGAGCAAGTCTCTGATCGGCCGCCGCCCGGGGGG
GCTCCCCAGGCCGTCTGGGGGGGCGCCGGCGCGGCGGCGGAGGGCGCAGG
AGTCGGCCTCGGCCACTTGCCCCCGGAAGGGCTAGCGGCGGCCCAGGGAC
AAGCCCAAGTCCCCGGGCAGGGCCAGGGCCAGGGCCAGGGCCAGGAGGCG
GTTGTGGGGGAGGCGCGGACAGGCCCGGACCCGGAGCAGCAGCTTTCCGT
TTTTGGGGGCTCACATGTCTACCCGCCGCCACCGGCCGGGGGCCAGGGCC
CGGCGCCC
back to top