mRNA_S-ischiensis_contig10.1583.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: A0A6S8YHJ8_9STRA (Inositol oxygenase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YHJ8_9STRA) HSP 1 Score: 223 bits (569), Expect = 2.310e-70 Identity = 100/149 (67.11%), Postives = 122/149 (81.88%), Query Frame = 1
Query: 1 DTWVCGCRIP-DSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALSLDQLWPYYEALLDKYLPGDGDGKLRW 444
DT+V GC+IP ++VV PE+N LNPDM+D RYNTE G+Y+P CG+DKL+F +GHDEYMY ML+ NNTT+P E L MIRYHSAY WHD+GAY HL+AP+DEE WVKLFN+FDLYTKDE+N L LD+LWPYY+ L +KY G GKL+W
Sbjct: 180 DTFVVGCQIPSEAVVFPEFNELNPDMSDPRYNTECGIYEPHCGIDKLMFAWGHDEYMYRMLVGNNTTLPREALDMIRYHSAYPWHDKGAYKHLMAPDDEERIEWVKLFNRFDLYTKDEENDLKLDELWPYYKNLCEKYGLG---GKLKW 325
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: A0A7S2H9C1_9STRA (Inositol oxygenase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H9C1_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.320e-69 Identity = 96/149 (64.43%), Postives = 118/149 (79.19%), Query Frame = 1
Query: 1 DTWVCGCRIP-DSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALSLDQLWPYYEALLDKYLPGDGDGKLRW 444
DT+V GCRIP D+VV PE+N LNPDM D RYNT+ G+Y+P CG+DKL+F +GHDEYMY ML+ NN ++P E L MIRYHSAY WHD+GAY HL+ PEDEE WVKLFN+FDLYTKDEDN L +D++WPYY+ L +K+ GKL+W
Sbjct: 100 DTFVVGCRIPEDAVVFPEFNTLNPDMHDPRYNTDCGIYEPHCGIDKLMFAWGHDEYMYRMLVGNNASLPREALDMIRYHSAYPWHDKGAYKHLMTPEDEERIEWVKLFNRFDLYTKDEDNDLKIDEVWPYYKGLCEKF---GLSGKLKW 245
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: A0A7S1E7W7_9STRA (Inositol oxygenase n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7W7_9STRA) HSP 1 Score: 214 bits (544), Expect = 7.440e-69 Identity = 96/151 (63.58%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 DTWVCGCRIPDSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALS---LDQLWPYYEALLDKYLPGDGDGKLRW 444
DTWV GC+IPD VV PE+N LNPDM+DERYN G Y+P CGLD L+F +GHDEYMY ML+ANN TIP EGL M+RYHSAY HD+GAY HLL EDEE W+++FN+FDLYTKDE+N + +D LWPYY LL+KY G+ KL+W
Sbjct: 11 DTWVLGCQIPDVVVFPEFNKLNPDMSDERYNHMYGCYEPNCGLDNLMFAWGHDEYMYRMLVANNCTIPREGLDMVRYHSAYPMHDKGAYKHLLKAEDEERMEWIQVFNKFDLYTKDEENDIREDFIDDLWPYYRGLLEKYNLGE---KLKW 158
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: A0A7S2H9G2_9STRA (Inositol oxygenase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H9G2_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.460e-68 Identity = 96/149 (64.43%), Postives = 118/149 (79.19%), Query Frame = 1
Query: 1 DTWVCGCRIP-DSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALSLDQLWPYYEALLDKYLPGDGDGKLRW 444
DT+V GCRIP D+VV PE+N LNPDM D RYNT+ G+Y+P CG+DKL+F +GHDEYMY ML+ NN ++P E L MIRYHSAY WHD+GAY HL+ PEDEE WVKLFN+FDLYTKDEDN L +D++WPYY+ L +K+ GKL+W
Sbjct: 179 DTFVVGCRIPEDAVVFPEFNTLNPDMHDPRYNTDCGIYEPHCGIDKLMFAWGHDEYMYRMLVGNNASLPREALDMIRYHSAYPWHDKGAYKHLMTPEDEERIEWVKLFNRFDLYTKDEDNDLKIDEVWPYYKGLCEKF---GLSGKLKW 324
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: K8YRU4_NANGC (Inositol oxygenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRU4_NANGC) HSP 1 Score: 206 bits (523), Expect = 1.340e-63 Identity = 86/148 (58.11%), Postives = 112/148 (75.68%), Query Frame = 1
Query: 1 DTWVCGCRIPDSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALSLDQLWPYYEALLDKYLPGDGDGKLRW 444
DTWV GC IP SVV PE+N LNPDM D RY + G+Y+ GCG++ L + +GHDEYMY ML+AN TT+P+ L M+R+HSAY WH++G YA + P DE WV+LFN+FDLYTKDE++A+ ++ LWPYY+ L+DKYLP G+LRW
Sbjct: 166 DTWVVGCAIPSSVVFPEFNALNPDMQDARYKSADGIYEAGCGIENLRWAWGHDEYMYRMLVANKTTLPKAALAMVRFHSAYPWHEKGEYARFMGPGDEVLLHWVRLFNRFDLYTKDEESAVDVEALWPYYQKLIDKYLP---PGRLRW 310
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: UPI001EB55F19 (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001EB55F19) HSP 1 Score: 202 bits (515), Expect = 1.620e-62 Identity = 93/148 (62.84%), Postives = 107/148 (72.30%), Query Frame = 1
Query: 1 DTWVCGCRIPDSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALSLDQLWPYYEALLDKYLPGDGDGKLRW 444
DTWV GC+IPDSVV PEYN NPDM+D RYNTERGMY+P CG L F +GHDEY+Y ML N TTIPEEGL MIRYHS Y WH++ Y L+ EDEE WV FN+FDLYTK D +++LWPYY+ L+DKYLPG KL W
Sbjct: 158 DTWVVGCKIPDSVVFPEYNATNPDMSDVRYNTERGMYEPHCGFKNLKFAWGHDEYLYQMLRFNETTIPEEGLAMIRYHSCYPWHNKKEYTSLMDEEDEELLDWVLEFNKFDLYTK-ADVRPDVEELWPYYQGLIDKYLPG----KLCW 300
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: A0A7S2Q0P5_9STRA (Inositol oxygenase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q0P5_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.430e-62 Identity = 93/153 (60.78%), Postives = 117/153 (76.47%), Query Frame = 1
Query: 1 DTWVCGCRIP-DSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALS----LDQLWPYYEALLDKYLPGDGDGKLRW 444
DTWV GCRIP ++VV PE+N LNPDM++ +YNT G+Y+ CGLD+L F +GHDEYMY ML+AN+ +IP EGL M+RYHSAY WHD+GAY HL+ P+D E +WV+LFN+FDLYTKD +N L +QLWPYY LL+KY G GKL+W
Sbjct: 153 DTWVVGCRIPNEAVVFPEFNPLNPDMSNPQYNTNYGIYEQNCGLDELRFAWGHDEYMYRMLVANDCSIPREGLDMVRYHSAYPWHDKGAYRHLMKPDDYERIKWVQLFNKFDLYTKDGNNELRGEKMKEQLWPYYLGLLEKYGLG---GKLKW 302
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: A0A7S3LFE8_9STRA (Inositol oxygenase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFE8_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.250e-61 Identity = 92/151 (60.93%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 1 DTWVCGCRIP-DSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNAL--SLDQLWPYYEALLDKYLPGDGDGKLRW 444
DT+V GCRIP D+V+ P++N LNPDM + YNTE GMYKP CGLD L F +GHDEYM+ ML+AN TTIP EGL +IRYHSAY HD+GAY HLL D E W+++FN+FDLYTKD DN + ++D +WPYY LL+KY G GKL+W
Sbjct: 172 DTFVVGCRIPNDAVIFPQFNKLNPDMTNPAYNTEYGMYKPNCGLDHLCFAWGHDEYMWRMLVANETTIPREGLDIIRYHSAYPMHDKGAYRHLLTEADLERLEWIRIFNRFDLYTKDSDNDIRNNMDNIWPYYRDLLEKYGLG---GKLKW 319
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: B8LCA1_THAPS (Inositol oxygenase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCA1_THAPS) HSP 1 Score: 200 bits (508), Expect = 4.210e-61 Identity = 91/153 (59.48%), Postives = 117/153 (76.47%), Query Frame = 1
Query: 1 DTWVCGCRIP-DSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALS----LDQLWPYYEALLDKYLPGDGDGKLRW 444
DT+V GC+IP ++VV PE+N LNPDM +E+YNT+ GMY+P CGLD L F +GHDEYMY ML+AN TT+P E L MIRYHSAY WH++GAY H++ ED E ++WV++FN+FDLYTKDE+N L ++L PYY LL+KY G GKL+W
Sbjct: 180 DTFVVGCQIPNEAVVFPEFNALNPDMTNEKYNTKYGMYEPHCGLDNLKFAWGHDEYMYRMLVANETTLPREALDMIRYHSAYPWHEKGAYRHMMKEEDYEREKWVQMFNKFDLYTKDEENELRGERMSEELLPYYRGLLEKYGLG---GKLKW 329
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Match: A0A2R5GDF0_9STRA (Inositol oxygenase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDF0_9STRA) HSP 1 Score: 196 bits (498), Expect = 4.110e-60 Identity = 87/143 (60.84%), Postives = 106/143 (74.13%), Query Frame = 1
Query: 16 GCRIPDSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYGHDEYMYNMLLANNTTIPEEGLRMIRYHSAYCWHDQGAYAHLLAPEDEETKRWVKLFNQFDLYTKDEDNALSLDQLWPYYEALLDKYLPGDGDGKLRW 444
GCRIPD VV PE+N LNPDM D + ++ G+Y+ GCGLD ++F YGHDEYMY ML ANNT++P+E L MIRYHS Y WH GAY L+ P D E K+WV LFNQ+DLYTK D ++ LWPYY++L+DKYLPG KLRW
Sbjct: 150 GCRIPDEVVFPEFNQLNPDMKDPKLSSALGIYETGCGLDNVLFAYGHDEYMYRMLKANNTSLPDEALAMIRYHSCYPWHQGGAYEALMTPRDHEMKKWVLLFNQYDLYTKS-DAKPDVEALWPYYQSLIDKYLPG----KLRW 287 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1583.1 >prot_S-ischiensis_contig10.1583.1 ID=prot_S-ischiensis_contig10.1583.1|Name=mRNA_S-ischiensis_contig10.1583.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=149bp DTWVCGCRIPDSVVLPEYNCLNPDMADERYNTERGMYKPGCGLDKLVFTYback to top mRNA from alignment at S-ischiensis_contig10:2821246..2825029- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1583.1 ID=mRNA_S-ischiensis_contig10.1583.1|Name=mRNA_S-ischiensis_contig10.1583.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3784bp|location=Sequence derived from alignment at S-ischiensis_contig10:2821246..2825029- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:2821246..2825029- >mRNA_S-ischiensis_contig10.1583.1 ID=mRNA_S-ischiensis_contig10.1583.1|Name=mRNA_S-ischiensis_contig10.1583.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=894bp|location=Sequence derived from alignment at S-ischiensis_contig10:2821246..2825029- (Schizocladia ischiensis KU_0333)back to top |