|
|
Homology
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: A0A6H5KHJ6_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ6_9PHAE) HSP 1 Score: 226 bits (577), Expect = 5.380e-65 Identity = 148/359 (41.23%), Postives = 199/359 (55.43%), Query Frame = 1
Query: 67 LTVSPDETALDLFRRMRCRPLRTGLGFLDQ-EAGDG--------IRPGEVVEICGPSRSGKTEVLINVVARYIMPRALGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQA----VVMECMSRVQVVRPTSTFEFLTALAVLHHEVQQTAAVVAVDGLGSFYWKDKMAESVAGSAVAMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSDQQRDYMLPAWQRLVSYRVVLERRHQYSSSGSPLDGAGRQPQRVVGAGGPGFSFCVARVVR--------PGDASTTKARDGGSGQ--RHPGGGLGRGAPLHFVVTCSGIHDI 1074
L+V DETAL+LFRR +PL TGL F D+ AG G + G+VVE+ GPS SGK+EVLINVVAR +MP LGGEER AV+FDN+ R LRLEQLL ++ N+ F V + G G + + +QLQ+ V++ C+ R++VVRP FE L A+ VL E+ AVV VDG+GSF+W+DKMA+S G AV+M+ V +ALV L ER V+LFAA+N + G ++ + R+Y+ WQR V++RV+L+R S ARV+ G + KA G+G+ R+ GG G P FVVT GIHD+
Sbjct: 4 LSVQDDETALELFRRAHHKPLLTGLAFFDEVPAGSGSSKTKDKGVGRGDVVELYGPSGSGKSEVLINVVARCVMPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGVGGG---GGTIHASPSRLQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKNG----KDLGDAATEHREYLPQIWQRAVTFRVLLQRXXXXXXXXXXXXXXXXXXXXXXA-----LSLFTARVLSLRLAKGNYGGGGGSFKAAAAGAGRVGRYGAGGDGESRPYFFVVTDDGIHDV 350
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: D7FPE2_ECTSI (Rad51 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE2_ECTSI) HSP 1 Score: 164 bits (416), Expect = 9.030e-44 Identity = 96/205 (46.83%), Postives = 126/205 (61.46%), Query Frame = 1
Query: 67 LTVSPDETALDLFRRMRCRPLRTGLGFLDQ-EAGDG--------IRPGEVVEICGPSRSGKTEVLINVVARYIMPRALGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPG---------QAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAVLHHEVQQTAAVVAVDGLGSFYWKDKM 627
L+V DETAL+LFRR +PL TGL F D+ AG G + G+VVE+ GPS SGK+EVLINVVAR +MP LGGEER AV+FDN+ R LRLEQLL ++ N+ F V + G A++SRP + L+ V++ C+ R++VVRP FE L A+ VL E+ AVV VDG+GSF+W+DK+
Sbjct: 4 LSVQDDETALELFRRANHKPLLTGLAFFDEVPAGSGGSKTKDKGVGRGDVVELYGPSGSGKSEVLINVVARCVMPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRP--------QQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKV 200
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: A0A7S3PDZ0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PDZ0_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.330e-24 Identity = 83/280 (29.64%), Postives = 143/280 (51.07%), Query Frame = 1
Query: 43 LDTMHSAPLTVSPDETALDLFRRMRC-RPLRTGLGFLDQE--AGDGIRPGEVVEICGPSRSGKTEVLINVVARYIMPRALGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAVLHHEVQ-QTAAVVAVDGLGSFYWKDKMAESVAGSAVAMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSDQQR-DYMLPAWQRLVSYRVVLERRHQYSSSGSP 867
+ + S V DETAL R R R L TG+ LD+ + DG +V+EI G S +GKT++L+++VA ++P+ +GGEE +YFDNE +FD R++ +++E++ V + G G +G +D ++ + EC RV+VVR S E L L L ++ + ++ +D + SF+W+ +S +A + ++ AL L+ + + + LF S +++R +Y+ W+ +VS RV L R + + S SP
Sbjct: 19 IGNLQSLAELVKADETALAFINRTRNNRILYTGISTLDKRKPSHDGA---DVIEISGLSNTGKTQLLMHIVASCVLPQDMGGEESVCIYFDNEMKFDPGRMQSIITEQI-------VNIVDGGGGLRFFHGQTGTGND-----IEKTITECTDRVKVVRCRSNLEVLYTLYSLRPAIESENIRLICMDTVASFFWETLDTDS---NASGLHVSIPNALKRLMQYNQLCVAVTKPVLFNFTSSAPMLNKKRTEYLSETWRNMVSTRVFLSRAREQNVSISP 280
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: A0A8J9RB23_9CHLO (DNA repair protein XRCC2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RB23_9CHLO) HSP 1 Score: 112 bits (280), Expect = 1.040e-23 Identity = 91/303 (30.03%), Postives = 138/303 (45.54%), Query Frame = 1
Query: 73 VSPDETALDLFRRMRCRPLRTGLGFLDQEAGDGIRPGEVVEICGPSRSGKTEVLINVVARYIMPRALGGE----ERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTAL---AVLHHEVQQTAAV--VAVDGLGSFYWKDKMAESVAGSAV-----------AMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSDQ------QRDYMLPAWQRLVSYRVVLERRHQYSSSGSPLDGAGRQPQRVV 903
V PDETA L R P+ TGL F + +RPG+V+E+CGP+ +GK+E LI V A ++PR GE E V+FD + FDTLRL Q+L+ R+RN+P + E ++ A EC+ R +V +S+F FL AL VL ++ V + VD + +FYW D+ A ++ + A + L L+ E + + A + A+ S + R+++ AWQ +VS R++L S L G G +P V
Sbjct: 18 VQPDETAAQLIARTHVEPVITGLFFANV-----LRPGQVLELCGPAGAGKSESLIQVAAAQVLPRNWRGEQLGVEENVVFFDLDRTFDTLRLYQVLACRLRNTP---------------------NQQPSREDEVIAAAEECLRRFYLVPCSSSFSFLAALRTCGVLIDRLKGEGGVQLLLVDNVAAFYWLDRAAPPLSACTMDPSKDAHLGLQQAHACIAAELQALMREHRLAVIATKQAVLSASSSAFDRPEAVDVWAHREFLPKAWQDIVSMRLLLR-----GPSLVELGGTGPRPPFAV 289
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: A0A2V0PAG5_9CHLO (RECA_2 domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PAG5_9CHLO) HSP 1 Score: 105 bits (261), Expect = 3.190e-21 Identity = 85/284 (29.93%), Postives = 134/284 (47.18%), Query Frame = 1
Query: 73 VSPDETALDLFRRMRCRPLRTGLGFLDQEAGDGIRPGEVVEICGPSRSGKTEVLINVVARYIMPRA---LGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAVLHHEVQQT---AAVVAVDGLGSFYWKDKMAESVAGSAVAMRA------------------------AVVRALVHLVGER-SVMLFAARNALFPPRSGGGSSDQQRDYMLPAWQRLVSYRVVL 831
V+PDETA + F R + TGL +DQ +RPG+V+E+ GP+ GK+E+L + A +++ G + + D E +FD LRL Q+L++ V G +D R ++A MSR +V S+ EFL LAVL +QQ +++ +D +GS+ W+D+ A AG A A A A AL+ L+ R + + A ++A + G G QRDY+ PAWQR+V++R+++
Sbjct: 11 VAPDETAAEFFARQVNEAIATGLTCVDQHVK--LRPGQVLELVGPTGVGKSELLAEIAAHFVLTSRGDDPAGVPDSVLLIDLESKFDPLRLLQILAQHV------------------------GQND----RAIEAA----MSRFHLVCCNSSAEFLALLAVLPQRLQQMRGKCSLLLIDNIGSYSWQDRAARPPAGQAGAPAALHHXXXXLLVGADPGPPLTMQRVHAAAAALLQLLAARLRLAVVATKSAAVALQEGEGGRLVQRDYLPPAWQRVVTHRLLM 260
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: M3ZS46_XIPMA (RECA_2 domain-containing protein n=2 Tax=Xiphophorus TaxID=8082 RepID=M3ZS46_XIPMA) HSP 1 Score: 97.1 bits (240), Expect = 1.400e-18 Identity = 72/249 (28.92%), Postives = 116/249 (46.59%), Query Frame = 1
Query: 181 GEVVEICGPSRSGKTEVLINVVARYIMPRALGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAVLHHEVQQT--AAVVAVDGLGSFYWKDKMAESVAGSAVAMRAAVVRALVHLVG----ERSVMLFAARNALFPPRSG--GGSSDQQRDYMLPAWQRLVSYRVVLERRHQYSSSGSPLDGAGRQPQRVV 903
GEVVE+ GP +GKTE+L +++ R ++P A GG E V+ D + D RL +L R L AV+ C+SR+ VVR +S+ E L L L + AA++ +D + +FYW D+ S G++VA + + L+G + + +FA + + SG SS+ R ++ AWQRLV++R+V ++ + + G+G Q R V
Sbjct: 40 GEVVEVYGPEGTGKTELLYHLLCRCVLPEAAGGLEVDVVFVDTDYSLDVFRLASVLDSR-----------------------------------LSAVLRSCLSRLLVVRCSSSSELLLTLHFLETTLSSRPKAALLLIDSISAFYWSDR---SEGGASVAKQEEKLSRCSELLGRLLRDYRITIFATCHPIRRTSSGPPSSSSEADRSHLCRAWQRLVTHRLVCSKQEAEHNPANGDQGSGEQRNRQV 250
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: A0A6P4ZTH1_BRABE (DNA repair protein XRCC2-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZTH1_BRABE) HSP 1 Score: 95.9 bits (237), Expect = 3.220e-18 Identity = 77/273 (28.21%), Postives = 121/273 (44.32%), Query Frame = 1
Query: 85 ETALDLFRRMRCRPLRTGLGFLDQEAGDGIRPGEVVEICGPSRSGKTEVLINVVARYIMPRALGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAVLHHEVQQT--AAVVAVDGLGSFYWKDKMAE-SVAGSAVAMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSDQQRD-------------------YMLPAWQRLVSYRVVLER 837
E+ L R+ RP T L A G +PG+ VE GP + KTE+L+++ AR I+P +LGG E V+ D + FD LRL +L R+ D+ D+ V +C+ R+ +VR S+ + + L L H + T A++ VD + +FYW D+ + S++G + R V L + + ++L A + A+F +S S Q+ D YM AWQ ++ YR V R
Sbjct: 6 ESGAQLLARLGSRPSLTQLETSLFSADAGPKPGDAVEFYGPEGTAKTEMLLHLTARCILPASLGGLEAGVVFIDTDFHFDILRLVAILEGRL-------------------------DTTDEDR------VKDCLRRLYIVRCNSSEQLVITLHSLEHILASTPDVALLIVDSISAFYWLDRSTDDSISGQELNQRRCV-DVLSRYLTDYGIVLIATKQAIFGQKSR--KSQQKEDTTLSPKVEKTKVENVEHYEYMCHAWQNMIKYRYVFSR 244
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: I0YLY0_COCSC (Lipoxygenase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLY0_COCSC) HSP 1 Score: 99.8 bits (247), Expect = 5.280e-18 Identity = 82/280 (29.29%), Postives = 132/280 (47.14%), Query Frame = 1
Query: 73 VSPDETALDLFRRMRCRPLRTGLGFLDQEAGDGIRPGEVVEICGPSRSGKTEVLINVVARYIMPR-----ALGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAV---LHHEVQQTAAV--VAVDGLGSFYWKDKMAESVAGSAV-----------AMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSDQ------QRDYMLPAWQRLVSYRVVL 831
+ PDETA L R P+ TGL F +RPG+V+EI GPS + K+EVLI V A I+PR LGGEE V FD + DTLRL Q+++ R+R AAAS + E ++ A C+ R+ VV +S+F FL +L L ++Q++ + + +D + ++YW D+ ++ + A A + L L+ + + + A + A+ S + R+++ AWQ +V+ R++L
Sbjct: 8 LQPDETAAQLIARTNVDPVNTGLFFASV-----LRPGQVLEITGPSGAAKSEVLIQVAAARILPRNWKGEQLGGEENV-VLFDLDRTLDTLRLYQVVAGRLR-------------AAAS--------NQHVGEDEVIATAERCLQRLHVVLCSSSFSFLASLRTCGPLLKQLQESGGMQLLLIDNVAAYYWLDRASQPLPACAFDPLRDGQTSLQQAHACIAAELQTLMRQHRLAVIATKQAVLSASSSAFDRTEAVDIWAHREFLPKAWQEIVTMRLLL 260
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: UPI0009E56730 (DNA repair protein XRCC2-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E56730) HSP 1 Score: 94.7 bits (234), Expect = 9.630e-18 Identity = 77/274 (28.10%), Postives = 131/274 (47.81%), Query Frame = 1
Query: 85 ETALDLFRRMRCRPLRTGLGF-LDQEAGDGIRPGEVVEICGPSRSGKTEVLINVVARYIMPRA-----LGGEERTAVYFDNEPRFDTLRLEQLLSERVRNS------PAFM-------VGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAVLHH--EVQQTAAVVAVDGLGSFYWKDKMAESVAGSAVAMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSDQQ--RDYMLPAWQRLVSYRVVLER 837
E+A LF R+ + GL L + +GI+PG VVE G SGKTE+L++++A I+P++ L G VY D + F LRL ++ R+ NS AF+ V +PG +A P + D+E +++ C+ R+ +V S+ + L + L + + V +D L +FYW D+ + +V A+ + + V++ A + A+F GSSD+ R+++ AWQ+LV+YR ++
Sbjct: 4 ESAAQLFVRLGGKHALDGLDTNLFGDIPEGIQPGNVVEFSGQEGSGKTEMLLHLIANCILPKSWKDLKLNGRSVGVVYVDTDYHFQLLRLVTIMEHRILNSIKDTQTGAFLENNRSNTVENIPGSDSAHYP-----EKYSDYEDFIKS----CLGRLFIVHCNSSIQLLATVLSLENLLAAKPEVGVFMIDSLSAFYWLDRCGGGSQSHQEHKQQKIVDAIRNYTQQYRVVVIATKQAIF------GSSDKSMNREHLCQAWQKLVNYRFEFDK 262
BLAST of mRNA_S-ischiensis_contig10.1517.1 vs. uniprot
Match: UPI001602AA17 (DNA repair protein XRCC2-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001602AA17) HSP 1 Score: 94.4 bits (233), Expect = 1.160e-17 Identity = 73/270 (27.04%), Postives = 122/270 (45.19%), Query Frame = 1
Query: 85 ETALDLFRRMRCRPLRTGLGFLDQEAGDGIRPGEVVEICGPSRSGKTEVLINVVARYIMPRALGGEERTAVYFDNEPRFDTLRLEQLLSERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQVVRPTSTFEFLTALAVLHHEVQQTA--AVVAVDGLGSFYWKDKMAE-SVAGSAVAMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSD----------------QQRDYMLPAWQRLVSYRVVLER 837
E+ L R+ RP L A G + G+ +E+ GP + KTE+L+++ AR I+P +LGG E V+ DN+ FD LRL +L R+ + D+D +Q C+ R+ +VR S+ + + L L H + ++ A++ VD + +FYW D+ + S++G + R V L + + ++L A + ALF +S ++ + +YM AWQ L+ YR V R
Sbjct: 6 ESGAQLLARLGSRPSLVQLETALFRADMGPKSGDAIELYGPEGTVKTEMLLHLTARCILPASLGGLEAGVVFIDNDYHFDILRLVTILEGRLDTT------------------------DEDRMKQ-------CLGRLYIVRCNSSEQLVITLHSLEHIIASSSEVALLIVDSISAFYWLDRSTDDSMSGQELNQRRCV-DILSRYLSDYGIVLIATKQALFGHKSRKNQNEDTTLSPKLEKTKVENVEHYEYMCHAWQNLIKYRYVFSR 243
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 166.0 |
| Seed ortholog evalue | 3.1e-38 |
| Seed eggNOG ortholog | 2880.D7FPE2 |
| Preferred name | XRCC2 |
| KEGG rclass | RC00561 |
| KEGG ko | ko:K00454,ko:K10879,ko:K17890,ko:K21052 |
| KEGG Reaction | R03626,R07864,R07869 |
| KEGG Pathway | ko00515,ko00591,ko00592,ko01100,ko01110,ko03440,ko04136,ko04138,ko04140,ko04621,map00515,map00591,map00592,map01100,map01110,map03440,map04136,map04138,map04140,map04621 |
| KEGG Module | M00113 |
| GOs | GO:0000003,GO:0000150,GO:0000217,GO:0000226,GO:0000278,GO:0000280,GO:0000400,GO:0000707,GO:0000724,GO:0000725,GO:0000730,GO:0001701,GO:0001756,GO:0003002,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007127,GO:0007131,GO:0007275,GO:0007389,GO:0007399,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009952,GO:0009987,GO:0010165,GO:0010212,GO:0010332,GO:0010720,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0030154,GO:0031023,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033061,GO:0033063,GO:0033554,GO:0034622,GO:0034641,GO:0035264,GO:0035282,GO:0035825,GO:0040007,GO:0042148,GO:0042623,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043523,GO:0043524,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0045003,GO:0045595,GO:0045597,GO:0046483,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051239,GO:0051240,GO:0051321,GO:0051716,GO:0051960,GO:0051962,GO:0060284,GO:0060429,GO:0060548,GO:0061053,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140013,GO:0140097,GO:1901214,GO:1901215,GO:1901360,GO:1901363,GO:1903046,GO:2000026,GO:2000269 |
| EggNOG free text desc. | meiotic DNA recombinase assembly |
| EggNOG OGs | KOG2859@1,KOG2859@2759 |
| EC | 1.13.11.12 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01003,ko03029,ko03400,ko04131 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | P-loop containing nucleoside triphosphate hydrolase |
| Ec32 ortholog | Ec-14_004600.1 |
| Exons | 7 |
| Model size | 1815 |
| Cds size | 1053 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815530.9729795-UTR-S-ischiensis_contig10:2245898..2245949 | 1622815530.9729795-UTR-S-ischiensis_contig10:2245898..2245949 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 2245899..2245949 + |
| 1695739751.7629862-UTR-S-ischiensis_contig10:2245898..2245949 | 1695739751.7629862-UTR-S-ischiensis_contig10:2245898..2245949 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 2245899..2245949 + |
| 1622815531.066472-UTR-S-ischiensis_contig10:2252846..2253557 | 1622815531.066472-UTR-S-ischiensis_contig10:2252846..2253557 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 2252847..2253557 + |
| 1695739751.8505108-UTR-S-ischiensis_contig10:2252846..2253557 | 1695739751.8505108-UTR-S-ischiensis_contig10:2252846..2253557 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 2252847..2253557 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815530.984578-CDS-S-ischiensis_contig10:2245949..2246054 | 1622815530.984578-CDS-S-ischiensis_contig10:2245949..2246054 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2245950..2246054 + |
| 1695739751.7808864-CDS-S-ischiensis_contig10:2245949..2246054 | 1695739751.7808864-CDS-S-ischiensis_contig10:2245949..2246054 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2245950..2246054 + |
| 1622815531.0015318-CDS-S-ischiensis_contig10:2246497..2246651 | 1622815531.0015318-CDS-S-ischiensis_contig10:2246497..2246651 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2246498..2246651 + |
| 1695739751.7937813-CDS-S-ischiensis_contig10:2246497..2246651 | 1695739751.7937813-CDS-S-ischiensis_contig10:2246497..2246651 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2246498..2246651 + |
| 1622815531.0115337-CDS-S-ischiensis_contig10:2247317..2247475 | 1622815531.0115337-CDS-S-ischiensis_contig10:2247317..2247475 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2247318..2247475 + |
| 1695739751.8024633-CDS-S-ischiensis_contig10:2247317..2247475 | 1695739751.8024633-CDS-S-ischiensis_contig10:2247317..2247475 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2247318..2247475 + |
| 1622815531.0252001-CDS-S-ischiensis_contig10:2248513..2248669 | 1622815531.0252001-CDS-S-ischiensis_contig10:2248513..2248669 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2248514..2248669 + |
| 1695739751.8112676-CDS-S-ischiensis_contig10:2248513..2248669 | 1695739751.8112676-CDS-S-ischiensis_contig10:2248513..2248669 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2248514..2248669 + |
| 1622815531.0363495-CDS-S-ischiensis_contig10:2250013..2250122 | 1622815531.0363495-CDS-S-ischiensis_contig10:2250013..2250122 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2250014..2250122 + |
| 1695739751.8211467-CDS-S-ischiensis_contig10:2250013..2250122 | 1695739751.8211467-CDS-S-ischiensis_contig10:2250013..2250122 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2250014..2250122 + |
| 1622815531.0461733-CDS-S-ischiensis_contig10:2250874..2251151 | 1622815531.0461733-CDS-S-ischiensis_contig10:2250874..2251151 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2250875..2251151 + |
| 1695739751.8319356-CDS-S-ischiensis_contig10:2250874..2251151 | 1695739751.8319356-CDS-S-ischiensis_contig10:2250874..2251151 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2250875..2251151 + |
| 1622815531.0561624-CDS-S-ischiensis_contig10:2252752..2252846 | 1622815531.0561624-CDS-S-ischiensis_contig10:2252752..2252846 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2252753..2252846 + |
| 1695739751.8413966-CDS-S-ischiensis_contig10:2252752..2252846 | 1695739751.8413966-CDS-S-ischiensis_contig10:2252752..2252846 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 2252753..2252846 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1517.1 >prot_S-ischiensis_contig10.1517.1 ID=prot_S-ischiensis_contig10.1517.1|Name=mRNA_S-ischiensis_contig10.1517.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=351bp
MHSAPLTVSPDETALDLFRRMRCRPLRTGLGFLDQEAGDGIRPGEVVEIC
GPSRSGKTEVLINVVARYIMPRALGGEERTAVYFDNEPRFDTLRLEQLLS
ERVRNSPAFMVGALPGQAAASRPPGPSGDSDDDWERQLQAVVMECMSRVQ
VVRPTSTFEFLTALAVLHHEVQQTAAVVAVDGLGSFYWKDKMAESVAGSA
VAMRAAVVRALVHLVGERSVMLFAARNALFPPRSGGGSSDQQRDYMLPAW
QRLVSYRVVLERRHQYSSSGSPLDGAGRQPQRVVGAGGPGFSFCVARVVR
PGDASTTKARDGGSGQRHPGGGLGRGAPLHFVVTCSGIHDIAGPAGAAGT
* back to topmRNA from alignment at S-ischiensis_contig10:2245899..2253557+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig10.1517.1 ID=mRNA_S-ischiensis_contig10.1517.1|Name=mRNA_S-ischiensis_contig10.1517.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7659bp|location=Sequence derived from alignment at S-ischiensis_contig10:2245899..2253557+ (Schizocladia ischiensis KU_0333)
AGCGGCTTTCAGCTGAGCGAGGATTGCGCTGTTTTTGAACCCCTGGACAC
CATGCATTCGGCCCCCTTGACTGTCTCGCCGGACGAGACCGCACTAGACT
TGTTTCGAAGAATGCGCTGCAGGCCCCTGCGGACGGGTTTGGGCTTCTTG
GACCAGGCGGGTGTCCGTTTTGCGCGCAAACTTTTCGCATGGCTTTGCCA
AGTTGTGCAATCTCACCTGGACTCCCACATGCCCCCAGGCCAGCTTGGGG
CCCATGTACTAGCGTACCCCTGCAAATGCTGCGGTCCGCGAGGAGTATTC
GGGCTTGAATTTTATTTGGAGCACTGAGCCCGCCGGCCGGAGGAACGCTC
CCGGCACCGAAAGATGACTGAATGAGTACACCCGCATGAAGCCACAATAG
TTTGCTGCTCGAACCCCCCCACGCCTCTGGCGGGGAGGGGCATCCTCCCG
CATTGGCTCGCCAAGGACGGAAGGGGGTTTGCTCTGAACTCAGAGGAGGG
CACATGGTCAGTGGTCTCTGGGCTACAGCAACCACAAAGTGAGGACATGT
ACTTCGTACTTCAAACTCGTGCATGTTACCCGGGCGGTGACCGTGGCAGG
AGGCTGGGGATGGCATCCGTCCGGGCGAGGTGGTGGAGATCTGCGGGCCG
AGCAGGAGCGGGAAGACAGAGGTGCTCATCAATGTCGTGGCGCGGTACAT
CATGCCACGCGCCCTCGGGGGCGAGGAAAGGACGGCCGTATATTTTGACA
ATGGTGCGTTGTGTTGCCGGCTGGGACAGGGTCTGGTCCGTTAGGGCGAG
GAGAGGGCGGCTGTGCACTAGTTCCAAGCACTGCTTGCTTTTGTACTGAC
GGGCTATGTTACGTTGCCGCGAGGCAAGCCCCTGGACACGGCTGACTCTG
CCCTTGCAGAGGTTGATCGGGCTCCGCGGGCGTATGTTTCCGCCGAAACC
GGCGATAGCGGTATATCGCCGTCCACCTGCTGTATCAAAGGTTGAAACAT
GCTCGATTTCAAAGGAGAATAAACCAGAGGAACCGAGCAAGGCTTTAGCC
GGTTTAACCGGTGGGCCGGCTACCCCGAACCGACCGGCAAAGAAACAGCT
CCGGTTCACAGATCTGCTGGTAGCCCAAGCGAGGTTTGATGGACAAGCAC
AGAAGTACAGCTCCAGGGTCGGTCGGTGGGCCCGACGACCAGACGTGTTC
ACAGGATGGGGTAGCTACCTGTCCGACACAAGTACACGCATACACACACG
CACACACACACACACACACACACCAGTGCCTCTCCATATATACTTGCTTG
CACGCCTCCAAGCACATACTTCCTTGCAAGTATACACCATGCCTCATCTG
TGCCCGCCGCCGCCGCCGCCGCCTGCCCACCGGGGGCCCCCCCGCCCGTG
GACGGACGTGCCGGGGCAGAGCCGAGGTTCGACACCCTACGCCTGGAGCA
GCTGCTGAGTGAGCGCGTCAGGAACAGCCCCGCTTTCATGGTGGGGGCGC
TGCCGGGCCAGGCGGCCGCCAGCAGACCCCCCGGGCCGAGCGGGGACTCT
GATGACGACTGGGAAAGGCAGTTGCAGGCGAGGGGTTGGGGCGAGAGAGC
CAAGAGTAGGGTTGTGAACTGGCAATGCCTACCAGCTTGACTGTGAACCG
GGCTTGTGACCGGTCGGTTTTAACCGGTTGCCGGTATACGGCTAAAGCCT
TGCCAAAATCAACGAATACCGGTCATGTCACCCACTCCGGCTACACAATG
GGCCACCGATCGGCTAGCCGGCTAAACCAGTTAACTGTTGCCGACCGGCA
AAGACCGGCACCCGTTCACAACCCTAGCCAAGGCGGAACTCGTTCACGAA
GGGGGGGCGAGCGGCGATGTGGCTGTACTTGGAGAGGGAGCTCTTAGCAG
TTTTCCCCGAGGAAGACCTCTTTTGGTGATGTGCTTCGAAGTGCTCGCGT
CGGTTTCCTGTTCTTTCGCCCATGGCTCGCTGCTTGGACGTGGAACTGTG
CGTGCCGCTGGGTTCAGGCGTGCTTGTGCTGCGCGTGCCGTGGCACGAGC
GCCGTGAGCTAGCTTGGCACAGCGGCCTGGAGACCGTAAAGTACTTCTCC
GAAGCGGAGTACAGTATTATACAGTACAGTACTACTGTACTGTACAGTAC
AGTACAGCAGTACTCGTACTTGGTAGTAGAAGAACACGAGCGCTTGGTGT
GTACAGTTGAGCGCTGTTCTTGTAGGGCGCTCAGAAGTGCTTGGAGGTAC
CCCGCGCGCGCGCATGTGCGCGTGTGTGTGTGTGTGTGCGTGCGTGTTGT
GCGCGCGCTGCCGTGCGTACGCTGCCGAGGCAGTTCCAAGTGCCTGCAGC
AGAGTGGAGCAGCCCTTGTCCACATGCGGTAGGAGCACCAAGTGCTTCTA
AGTATGCGGTACCGTGTACAGTGCTCGCTCGTGAAATAGTTCAATAGTTT
TCGGCGCCGCGGTACAACATAGTAAGTGCTGCCCTGCGGAACAACGCCGC
CCCCCCCCCCCCACCCCCCAcccCCCCGGGCGCGGCCCCGGACTCCCCCT
CACGTGCACACTCTACGCCTGCGCATGCCATGCCCCGGGGCGACCCCGTG
TCTCGCCGCCCGCAGGCGGTGGTGATGGAGTGCATGTCCCGCGTGCAGGT
GGTGCGCCCCACGAGCACGTTCGAGTTCCTGACGGCGCTGGCGGTGCTGC
ACCACGAGGTGCAGCAGACGGCGGCCGTCGTGGCGGTGGACGGCCTGGGC
TCCTTCTACTGGAAAGACAAGGTAACTGTAGCTGTGCCTGGCCCGCTTAC
ATGGCGGCAGGAAGTACAAAGTACGAGTACTCGAACAGTACCTGCAGTGG
TGCTGCAGTACAGTACAACTGTACAGTATATACTTGGTATATATGTACTG
TGCTCATTGGCTTGTCTTGCAACATAACCTTGCGTGCAATGCCGACAGCC
CTAAGTCGAAACTTCGGGTTTGCCCTCCGGCAGGAGTAGCTATTTAGCCA
TGGACTCTCGCGTCCCAATTAGGCCGGGACGGAGCATACCGGGCTTGCAC
AAGTACAGTAGTACAGTACTGTGATGTGGGTCGGCGGCTTTTGCCCCCTC
GTGAGGAGGAGGCGCCCGCGGTGGTTTGGTCTGGTTGGTCTTCTCTCGTC
CGGCTTCATCTTTCACCTGTTGCCACATCTGAGTCCAGCGGCCGTTAACC
CTTTGAGGACCATGTGCTACTAACTATCGTACAGTAGCGGGACACTCGCC
TACACTGTACTTACTTACTGTAGGGGTTTTGGCGCGGGATAGTTGTACGA
ATGGTTGGCAGTCCTCTCCGGAGTCGATCGCCCCTGCAACCATGTCAGGT
GGCAATGCCTTGGAAGTGCTTGGCCCTTTGACCCCCCGGCAGGGTGTACA
CGCATACTCTTACCAATTAATCCCTTCGGTATACTGTAACGTACAGCAGT
TCTGTGTACTGTACTGTACAGTAGTTCTGTGTACACCTGGGGCAAAAGGG
TTAAAGAGAGTGCTTCCGGAGCGGTGTGTTTCACGATAAGCACCTCAAAA
GCGCCTACCCCGCCTGCTGCAGCGCTCTGAAGGCGCCGCCTTGCAAGGTC
AACACGCCCCCGACGGCAACAGCACAAGCAGCAGCAGCAACAGCAACAGC
AGAGCTTTGCACATGGCCTGCGTCCTACTCGGGTGACTGCCGCAACCGCC
ATGCTCTGCGTGCGCACAAATCATTGGGCCGTTTGCTGTGTGTACTCATG
TTCGGACGAGGTTCCTCGTCTCTGTGCATGCCCTGGACCCGCACGATCCC
TGCCTTTGCTCATTCTCACGCGATCGCTGGCCAGCTGTAGCTCTCGCCAT
TGGCCACGCGTCCTATTGGACGGAGCACGCTGTACCACCAAAAAGCGCCA
CCCCTGCCGAAGCTGTGTTTGTTGTCCCGCGCACCGGGCCACGAACCCCC
GCGCGCCCCACTTCTGTCCGCGGGAAGGTGTCCTCGGAACCGCCACCTGG
CCACACACGTCTCTTCATGGAGGTTCGCTGCATTGCAGCCTCCCCCCCCG
CCTCCGCCTGCCTTTTCACAGCTCAACCCCCCGCTGCCACCCCCGCCCGC
GGTGGCATCTCCCAGATGGCGGAGAGTGTCGCGGGCTCGGCGGTGGCGAT
GCGGGCGGCGGTGGTGAGGGCCCTAGTTCATCTGGTGGGGGAGCGCTCGG
TCATGCTCTTCGCGGCCAGGAATGGTGAGCAAGCACTTCCGGGGGAATCA
GAGATGCTGTGCTGTACTGTACTGTTCTGTACCTTACTGTACTGTACTCC
ATACTGTATGTTTTGTGAGCAATGTACTCGTACGTGCTTTTCGAAGTACC
CGACTGTTCAGTACAGTACAGCAGTACGCATATCGTTGGATGCAGTGGCT
AGGCATTGTGCTGCGCGACTGTGTTGCCCGCTCCCATTGCGCTCGACGCG
ATTACTTGCTGAGTATCGTACTACTGTAATAGCCCAGAGGCCGTTGACCA
CGTTTCACGTCGTGCGTGTGTGCGCGTCTGCACTCGCATGCTCTCGACCA
CGCTCACGGGTTGATGCCTACTACTTACAGTACAGCACAGTAGTAGTAAG
AGTACACTGTTGGGCCTCACTGTGTGTGTCTCAGACTGGCCCTCAACATT
GGCAGCAGCAGCAGCAGTAGACAGAGTCAGAGGCAGCACGGCCCGCCCAC
TCCGGCTGCGGCCGCGGGGAGTGGTAGATGAAGTGCCATACTCCTAGTCA
AGACATACTCCTCCTCATCTCGAGCGCCTGGGCATATTTCCCCCCCCCCC
CGCCGCCCATCCTGTCCGTCACCACCACTGTCACCTCCACCGTGATAGCC
ACCACCACTACCACCACCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCAC
CACGGCCATGACTTCCCCACCACCACCACCACCACCACACAACCACCACC
ATCGCCACCACCCCACCGCGCGGCAGCTCTCTTCCCCCCCCGATCCGGGG
GGGGGTCGTCAGACCAGCAGCGGGATTATATGCTCCCCGCGTGGCAGAGG
CTGGTCTCGTACCGAGTCGTGCTGGAGCGGCGGCACCAATACTCAAGCTC
GGGCTCACCGCTGGACGGGGCCGGGCGGCAACCCCAAAGGGTGGTGGGGG
CGGGGGGTCCGGGCTTCTCCTTCTGCGTGGCGAGGGTGGTGCGGCCCGGG
GACGCTAGTACTACAAAGGCCCGAGATGGCGGCAGCGGCCAACGCCACCC
TGGGTGAGTTTGCCTTGGCGCCGGGCACGCGCGTGCGTGCGCGTGTGCGT
GCGTGCGTGCGCGTGCGTGCGTGCGCGCTTGCGTGCGTGTGGGCGCCGTG
TTTGTATGCAGACAGATGCCAAAACGCGGAGCGGAGTCTTTTCCCCGCGG
CGGCTTGTCGGTATCATCGGGGGCCGAGATGGTACATGTTTCGCCGGGCA
TGTGCTCATACTTGTACGGTATTGTTTTACCCCTGGAGGCGCCACACTTG
AGGGTCGCTGCCAGTGGGCTTCTTTTCTCGCGTTAGTGTGCAATTCCGCC
TCTGGCCTGAGGGTTGCTCGCCCTCCACGGCGACCGACCCCTGGTAGCTG
GTGCGTACACGTCGCGGGGCTGTGGACGGGGTGCGTAACCCCCAAAGCCT
CCCCACATCTTTGAACTCCTCTTGCGTTCGCTCCAGCCCCCGTCCGGGAG
CCCTTTCCCTCTGGTGCGCCTCCCCGCCCGCACAGGCATGCTTTTCTCGC
GGGCGGTCTGGAGTACTTGGAAATACTACTGTACTGTAGAGTGTGTACAG
TTTGTGTAGTACATGTGCGGTATTGTCCTACGGTTGCAATACCTACTCAT
CCTTCTTCGTATTTGTTGTTGTTGTTGTTGTTGCAGACCTAGTAGTGATG
GTGATACTGCGGTAGTACAGGTCATGACTACACTACAGCAGTATTGACAG
GCAGTTTGTTCAAATCCTTCAGGTTGTTCGACATAAATTGTCACATCCCT
GAGGACACTCTGTAGGAAGGCTGTTTTGATATCAACTTGCCTATTGAAAG
AGGCCAGTTGTAGTGAGCTGCCAAGGCTACAATGGCCCTAGCAGATGAAA
ATACAGCAGCAGTTGGGAGGGAGAGACAGTTGAAACCTATCCAAGCACTG
TAGCTGTGGGACTGGAATCCAAAGCAGCGGAATAGCTAGACGTAGGTGCA
AATACCCAACTATCGTGTGCAGTACTTAGTGCTTCGTCAGAAGTGTAGTG
CTTCCGGAAGTAGTACTCTACGAGTACAGTAGCAAGTACGCGCACATAGT
ACAGGAGTTGCTGTACAAGCACCTACTCGTACTCAAAGTACTACCATCCC
ATCCTCGGGAAGAGGTCGCGCACGCGGCGGCTCGTCCGAGAAGGGTCTTG
AGGGCCGGCCTCGAGGGCCGGCCGTGGCAGCGAGCAACAGCGTCCTGGGT
CAAGCCTGAGCGCGCACATAGTCAAAGCACGCTGCACACTGCACTTTGCG
AATCGCTTGCAGGAAGCACGTGCCCTACAGTAGGAGCACAGCGTACCCGC
TCGCGCGCACAGTAGGCACTTTGCATCCCACCGTGCAGCTGCTTCGACCG
TGTGTGTGCTGTCGAGCGACAAGGAAAACCACAAGTAGGTAGAACCAACC
CTCCGCTGGCTCCGTGCCCCCCCTGCACGACCCCCCGGCCCCACCCCTGC
ATGCACCACACCACCCCCTTTTGCCCCTCCTCCATCCACCGCCGTCCCAT
CTTCTCGGCCGTGGTGGCACATTGTGCCTCGTTGCGCGGGCTGCTGTGGC
GTGGCTCGCGGCACGTGGGGCCCGAATGATGGCTACGCTGCGTCTGCCCT
GCAGGGGAGGGTTGGGTCGCGGCGCCCCGCTGCACTTTGTGGTCACCTGC
AGCGGCATCCACGACATTGCCGGGCCGGCAGGCGCGGCGGGGACATGAAT
TCGGTCTCTCTGGGCCGCGGCAAGCGCTGTTTACTACAGTACATCCAGTA
GAGTGCTGGACGAATCGCGACTGCTGCACCTGTTTTGAGTTGTAGATAAG
CGGCGAGTTCCAGGCCCCGTGCCAAAAGGCTCGTCCCGAAACGGGACTCA
ACGAAGCCGTTCTTCCCCTCGCACCTGTATGAAGTGTGTGCTAATGTTGG
ACAGGGAGCTACTGTATGTAGCAACCCGTCCTGTGCACAGGCGTGCACTG
GCGCGCACGACACAGTATGTCGCTTGCTGGGCCGCCAGCGAGTCCCGCCT
GCTACCATTTTCAATGCTTTGAAGTAATATTTACCATCGTATAGCCATTG
TGGCCGTTTAGCCTTGCGTGCTACTACGCCGGAAGGGGCCTCACACTTGG
CAAGTTGAAACCACCTGACACGGTGCAGGCCCCAGGCAGTCACCGAGGGA
CTATTGCCACTGCAATAGAGTGGCCGCGACATATGATATACTATGTAATT
CCATCCCAGCCCCCGTCTCTCTTCCCCGTTCTCCTTTGTTTTCTCTTCTG
CTTGCTCTGCGAGTGAAGGCGAGAGAAGGAAGGGGTTCTTTGCTGTGATG
TGATGTGATGTGTTGTGGAGATACAGTGAGATATAGTACACATCACATCA
TTCGGTTTTTCTTTTCCTATTCACCCTGCGTGTGAAGGGGACTGAAGGAA
GGGCTTCCG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig10:2245899..2253557+ >mRNA_S-ischiensis_contig10.1517.1 ID=mRNA_S-ischiensis_contig10.1517.1|Name=mRNA_S-ischiensis_contig10.1517.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2106bp|location=Sequence derived from alignment at S-ischiensis_contig10:2245899..2253557+ (Schizocladia ischiensis KU_0333)
ATGCATTCGGCCCCCTTGACTGTCTCGCCGGACGAGACCGCACTAGACTT
GTTTCGAAGAATGCGCTGCAGGCCCCTGCGGACGGGTTTGGGCTTCTTGG
ACCAGATGCATTCGGCCCCCTTGACTGTCTCGCCGGACGAGACCGCACTA
GACTTGTTTCGAAGAATGCGCTGCAGGCCCCTGCGGACGGGTTTGGGCTT
CTTGGACCAGGAGGCTGGGGATGGCATCCGTCCGGGCGAGGTGGTGGAGA
TCTGCGGGCCGAGCAGGAGCGGGAAGACAGAGGTGCTCATCAATGTCGTG
GCGCGGTACATCATGCCACGCGCCCTCGGGGGCGAGGAAAGGACGGCCGT
ATATTTTGACAATGGAGGCTGGGGATGGCATCCGTCCGGGCGAGGTGGTG
GAGATCTGCGGGCCGAGCAGGAGCGGGAAGACAGAGGTGCTCATCAATGT
CGTGGCGCGGTACATCATGCCACGCGCCCTCGGGGGCGAGGAAAGGACGG
CCGTATATTTTGACAATGAGCCGAGGTTCGACACCCTACGCCTGGAGCAG
CTGCTGAGTGAGCGCGTCAGGAACAGCCCCGCTTTCATGGTGGGGGCGCT
GCCGGGCCAGGCGGCCGCCAGCAGACCCCCCGGGCCGAGCGGGGACTCTG
ATGACGACTGGGAAAGGCAGTTGCAGAGCCGAGGTTCGACACCCTACGCC
TGGAGCAGCTGCTGAGTGAGCGCGTCAGGAACAGCCCCGCTTTCATGGTG
GGGGCGCTGCCGGGCCAGGCGGCCGCCAGCAGACCCCCCGGGCCGAGCGG
GGACTCTGATGACGACTGGGAAAGGCAGTTGCAGGCGGTGGTGATGGAGT
GCATGTCCCGCGTGCAGGTGGTGCGCCCCACGAGCACGTTCGAGTTCCTG
ACGGCGCTGGCGGTGCTGCACCACGAGGTGCAGCAGACGGCGGCCGTCGT
GGCGGTGGACGGCCTGGGCTCCTTCTACTGGAAAGACAAGGCGGTGGTGA
TGGAGTGCATGTCCCGCGTGCAGGTGGTGCGCCCCACGAGCACGTTCGAG
TTCCTGACGGCGCTGGCGGTGCTGCACCACGAGGTGCAGCAGACGGCGGC
CGTCGTGGCGGTGGACGGCCTGGGCTCCTTCTACTGGAAAGACAAGATGG
CGGAGAGTGTCGCGGGCTCGGCGGTGGCGATGCGGGCGGCGGTGGTGAGG
GCCCTAGTTCATCTGGTGGGGGAGCGCTCGGTCATGCTCTTCGCGGCCAG
GAATGATGGCGGAGAGTGTCGCGGGCTCGGCGGTGGCGATGCGGGCGGCG
GTGGTGAGGGCCCTAGTTCATCTGGTGGGGGAGCGCTCGGTCATGCTCTT
CGCGGCCAGGAATGCTCTCTTCCCCCCCCGATCCGGGGGGGGGTCGTCAG
ACCAGCAGCGGGATTATATGCTCCCCGCGTGGCAGAGGCTGGTCTCGTAC
CGAGTCGTGCTGGAGCGGCGGCACCAATACTCAAGCTCGGGCTCACCGCT
GGACGGGGCCGGGCGGCAACCCCAAAGGGTGGTGGGGGCGGGGGGTCCGG
GCTTCTCCTTCTGCGTGGCGAGGGTGGTGCGGCCCGGGGACGCTAGTACT
ACAAAGGCCCGAGATGGCGGCAGCGGCCAACGCCACCCTGGCTCTCTTCC
CCCCCCGATCCGGGGGGGGGTCGTCAGACCAGCAGCGGGATTATATGCTC
CCCGCGTGGCAGAGGCTGGTCTCGTACCGAGTCGTGCTGGAGCGGCGGCA
CCAATACTCAAGCTCGGGCTCACCGCTGGACGGGGCCGGGCGGCAACCCC
AAAGGGTGGTGGGGGCGGGGGGTCCGGGCTTCTCCTTCTGCGTGGCGAGG
GTGGTGCGGCCCGGGGACGCTAGTACTACAAAGGCCCGAGATGGCGGCAG
CGGCCAACGCCACCCTGGGGGAGGGTTGGGTCGCGGCGCCCCGCTGCACT
TTGTGGTCACCTGCAGCGGCATCCACGACATTGCCGGGCCGGCAGGCGCG
GCGGGGACATGAGGGAGGGTTGGGTCGCGGCGCCCCGCTGCACTTTGTGG
TCACCTGCAGCGGCATCCACGACATTGCCGGGCCGGCAGGCGCGGCGGGG
ACATGA back to top
|