mRNA_S-ischiensis_contig10.1397.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1397.1
Unique NamemRNA_S-ischiensis_contig10.1397.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: A0A835ZPL7_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPL7_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.030e-53
Identity = 129/339 (38.05%), Postives = 176/339 (51.92%), Query Frame = 2
Query:   83 LLLWPISLAWCLIQRLILALLRVGGCRDPVKFVPPPRWLV-HCMAIPFRILNPAVVLGGENLDALGRKAPSRNSRNGGTPGNAPTGAPVLLVGNHTLYGLDHIPIVDQVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLWLPVLLPFNSLQRQYFVFGKPISSEGYNRDWESDAKTLELYEAVRGEVEGLIHGLQGLQRRDPNRYPLTRAWRWCLSRMGLVKDYDRAVRTA 1096
            LLLWPI++     + L+   +     R     +PP  WL+   +++PFR+LNP VVLG  +L+A+     +  +  G T G  P G  V         G D    VD+           +       +P+W   AE+ GGV GT   C  LM +G+  LL PGG  +       ++ QL+W   MGF R+A+KHG  V+PFAS+GLENS+  + S+D+ W  R+  V     R               LP+LLP N +QRQYF FG+PIS+  Y  DWE +AK LELYE VRG V+ L+  LQ +Q +DPNRYP  R  R  LS  G +K YD  +  A
Sbjct:  406 LLLWPIAIGIKFAKTLLNLSIGSSAARHRAPQLPP--WLLLQLLSLPFRVLNPPVVLGVRHLEAVASHRAAAAAALGDT-GGVPAGEDVSEKA--AAGGSD----VDKGSGAAAAAQAPVLLAGLDNIPMWTLFAESLGGVKGTTAKCAELMSHGKWQLLYPGGGED-------DRTQLKWNASMGFTRMAVKHGAVVVPFASIGLENSLHSIGSLDVAWWLRVLEVSCPDIR---------------LPLLLPLNGMQRQYFAFGEPISTAKYGGDWECNAKCLELYEDVRGSVQHLLSALQRVQTQDPNRYPAMRVARRLLSVAGAIKAYDATIEQA 713          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: A0A507FM02_9FUNG (Diacylglycerol O-acyltransferase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FM02_9FUNG)

HSP 1 Score: 162 bits (409), Expect = 7.060e-41
Identity = 101/294 (34.35%), Postives = 147/294 (50.00%), Query Frame = 2
Query:  176 FVPPPRWLVHCMAIPFRILNPAVVLGGENLDALGRKAPSRNSRNGGTPGNAPTGAPVLLVGNHTLYGLDHIPIVDQVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMG---WCQRLTRVGLARSRAAASRLRAGDPGN-------LWLPVLLPFNSLQRQYFVFGKPISSEGYNRDWESDAKTLELYEAVRGEVEGLIHGLQGLQRRDPNRYPLT 1027
            F PP + L+     PF  + P  +   +NL+ + +    +                ++ VGNH + G+D    +  ++   G +PRG+ D      P W      FGGV G+R+NC ++M+ G+ L+L PGG  E       +KY L WK+++GFV+LAI+HGYT+IPF  +GLE+ V++ FS+  G   W    TR GLA   A A+ ++   P +       + +P+L P+ S Q  Y VFG PI   G   D ES      L   VR  VEG I   Q +Q  DP RY  T
Sbjct:   41 FTPPSKTLIRMATAPFLFMFPTKI---KNLEVVHKHKRRK----------------IMFVGNHLIGGMDLAFTMPLIYLNTGVYPRGVADILHYRFPFWAHGITLFGGVNGSRENCNIIMKAGEPLMLLPGGINEVLKDDRMDKYTLIWKDRVGFVKLAIEHGYTIIPFGIIGLEDMVSIAFSIPSGLFFWLMGDTR-GLA---APAANMKMQHPTSKPMPFPDIRIPILYPWLSFQTSYLVFGDPIECAGDFVDKES---VYALRNQVRDSVEGCIKSGQRMQSVDPRRYRKT 308          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: A0A7Y3D7Z6_9DELT (Acyltransferase family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3D7Z6_9DELT)

HSP 1 Score: 154 bits (388), Expect = 3.600e-38
Identity = 94/260 (36.15%), Postives = 136/260 (52.31%), Query Frame = 2
Query:  329 PTGAPVLLVGNHTLYGLDHIPIVD-QVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLW------LPVLL------PFNSLQRQYFVFGKPISSEGYNRDWESDAKTLELYEAVRGEVEGLIHGLQGLQRRDPNRYPLTRAWRWCLSRMGLVK 1069
            P   PVLL GNHT++GL  IP++  ++ E+ G+  RGL D     LPIWR      G V GTR++C  L R G+ +L+ PGG RE  ++   E+Y+L WKE++GF R+AI+H   ++PFASVG+E+   ++   +           + RSRA       G     W      LP +       P   L+RQYF+FG PIS++ Y    E       L   V+  ++  I  L  L++ DP RYP+ R  R   SR+G  +
Sbjct:   41 PREGPVLLTGNHTIFGLLDIPMLGLEIFEKTGRTVRGLGDHNHFALPIWRDALRRIGAVRGTRESCARLFRAGEAVLVFPGGGREV-MKHKHERYKLIWKERVGFARVAIEHQVPIVPFASVGVEDMFEIVVDAE----------DILRSRAGDLLRALGITEQPWFRHGEILPPIARGKGLGPIPRLERQYFLFGAPISTDPYRGRHEDREACFALRTEVQTVIQRQIDQLLELRQADPERYPIQRMLRGLSSRLGAPR 289          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: UPI001AC222AA (Uncharacterized protein n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=UPI001AC222AA)

HSP 1 Score: 152 bits (385), Expect = 8.800e-38
Identity = 98/262 (37.40%), Postives = 141/262 (53.82%), Query Frame = 2
Query:  323 NAPTGAPVLLVGNHTLYGLDHIPIVD-QVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLWL--------------PVLLPFNSLQRQYFVFGKPISSEGYNRDWESDAKT-LELYEAVRGEVEGLIHGLQGLQRRDPNRYPLTRAWRWCLSRMG 1060
            + P   PVLL GNHT+YG+  +P++   V+E  G+  RG+ D A   +PIWR L ++ G   G R+NC  ++R G+ LL+ PGG RE   R   E Y+L WKE++GFVRLAI+ G +++PFASVG+E+   V+   D           L RS         G     W               P  +P   L+RQYF+FG+PI + G     + DA+T L +  +V+  VE  I  L  ++ +DP+RYP+ R  R   SR+G
Sbjct:   48 HVPREGPVLLAGNHTIYGVLDVPMLALAVYEATGRVARGVGDHAHFAIPIWRDLLQSLGAFDGNRENCAAMLRAGEMLLIFPGGGREVMKRKG-EFYKLLWKERIGFVRLAIETGASIVPFASVGVEHMFEVVGDAD----------DLLRSPVGDLLRATGITRRSWFRKGELIPPITRGRGPASVP--RLERQYFLFGEPIPT-GSLAGRQDDAETCLAVRRSVQQRVESQIAMLLEVRSKDPDRYPVQRLLRKLASRLG 295          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: A0A7D4A1I3_9ACTN (Acyltransferase n=4 Tax=Actinomadura TaxID=1988 RepID=A0A7D4A1I3_9ACTN)

HSP 1 Score: 150 bits (378), Expect = 7.570e-37
Identity = 93/245 (37.96%), Postives = 134/245 (54.69%), Query Frame = 2
Query:  323 NAPTGAPVLLVGNHTLYGLDHIPIVD-QVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLWLPVL-----LPFNSLQRQYFVFGKPISSEGYNRDWESDAKTLELYEAVRGEVEGLIHGLQGLQRRDPNRYPLTRAWR 1039
            N P   P LLVGNHT+YG+   P++  ++H R G + R L D A   +P WR + +  G V GTR NC  L+R+GQ +++ PGGAREA  R   ++Y+L+W+ ++GF RLA++ G  +IPF SVG+E   T +  +D G       +  AR    A     G   ++ +PV       P    QR YF FG+PI +  +    + D    E+ +  R  VE +IHGL+  QR DP+R P  R  R
Sbjct:   38 NVPREGPALLVGNHTVYGVVDAPLIFFEIHRRRGVWVRSLADHAHWRIPGWRTVMDMGGSVDGTRDNCRALLRDGQMVVVFPGGAREA-TRDRADRYRLQWEGRLGFARLAVEAGCPIIPFGSVGVEEMFTTV--LDPG----SPLLAPARLLGRAVLGERGRRDDVLMPVSRGVGPTPIPRPQRLYFGFGEPIDTALWAGRADDDRAVTEVRDLARKSVEEIIHGLRAEQRDDPSRTPAGRVAR 275          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: UPI000360AFC6 (acyltransferase family protein n=2 Tax=Smaragdicoccus niigatensis TaxID=359359 RepID=UPI000360AFC6)

HSP 1 Score: 149 bits (375), Expect = 1.710e-36
Identity = 90/238 (37.82%), Postives = 129/238 (54.20%), Query Frame = 2
Query:  323 NAPTGAPVLLVGNHTLYGLDHIPIV-DQVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLWLPVLLPFNSLQRQYFVFGKPISSEGYNRDWESDAKTLELYEAVRGEVEGLIHGLQGLQRRDPNRYPLTRA 1033
            N PT  PVLLVGNHTLYGL  +P++ D+++   G+F RGL + A   +P WR +  A G V GTR NC  L+  G+ +++ PGG RE   R   E+Y+L WKE+MGF R+AI+ G  ++PFASVG+E++  ++   D      LT +  A  +   +            P  LP   ++R YF F +PI +  +      D    ++ +  R  VE  I  LQ  Q  DP+R  L RA
Sbjct:   50 NIPTDGPVLLVGNHTLYGLLDVPLMADEIYRSRGRFVRGLAENAHYKVPGWRDVLMAAGAVRGTRDNCRSLLAAGEAVMVFPGGGREVAKRKD-EQYRLLWKERMGFARMAIEAGCPIVPFASVGIEDNFDIVIDADH---HALTPIRDALQKVGVNWDLVPPVATGLGPTPLP--RMERLYFSFAEPIDTTRWAGLHNDDTALRDVRDRTRTAVEDHIASLQAKQEADPSRELLARA 281          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: UPI0006917A91 (acyltransferase family protein n=1 Tax=Spirillospora albida TaxID=58123 RepID=UPI0006917A91)

HSP 1 Score: 147 bits (371), Expect = 7.520e-36
Identity = 91/245 (37.14%), Postives = 134/245 (54.69%), Query Frame = 2
Query:  323 NAPTGAPVLLVGNHTLYGLDHIPIVD-QVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLWLPVL--------LPFNSLQRQYFVFGKPISSEGYNRDWESDAKTLELYEAVRGEVEGLIHGLQGLQRRDPNRYPLTR 1030
            N P   PVLLVGNHT+YG+   P++  ++H R G + R L D A   +P+WR L +  G V GTR NC  L+R+G+ +++ PGGAREA  R   ++Y+L+W  ++GF R+A++ G  ++PF +VG+E   + +   D           LA +R AA R+  G+ G     V+         P    QR YF FG PI +  +    + +    E+ +  R  VE LI GL+  Q RDP+R PL R
Sbjct:   38 NVPPEGPVLLVGNHTVYGVIDAPLIFFELHRRYGVWVRSLADHAHWRIPVWRTLLDMGGSVDGTRDNCRALLRDGRHVVVFPGGAREA-TRGRGDRYRLQWDGRLGFARMAVEAGCPIVPFGTVGVEEMFSPVLDADSPL--------LAPARVAA-RVVFGERGRRDDAVMPLSRGIGPTPVPRPQRLYFAFGDPIDTTPWAGRDDDERSLGEVRDLTRKSVEELIAGLRREQERDPSRTPLGR 272          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: A0A7S4IME2_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IME2_9EUKA)

HSP 1 Score: 149 bits (375), Expect = 1.500e-35
Identity = 83/236 (35.17%), Postives = 124/236 (52.54%), Query Frame = 2
Query:  323 NAPTGAPVLLVGNHTLYGLDHIPIVDQVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLWLPVLLPFN--SLQRQYFVFGKPISSEGYNRDWESDAKTL---ELYEAVRGEVEGLIHGLQGLQRRDPNR 1015
            N PT  PVL VGNH L G+D   ++  +++    F RGL DT    +PIW +     G VVG+R  C  LM  G+ +L+ PGGA E   + + +KY+L+WK++ GF RLAI+H YT+IP  ++G    + ++  V +GW                     G  G+L +P++ P +   +QR YF FGKPI +   NRD  ++   L   +   A+  E+  ++H     Q  DPNR
Sbjct:  149 NIPTDKPVLFVGNHALMGIDMGFLIFHLYKERNIFLRGLADTFHFSIPIWGEFLRRMGAVVGSRATCSSLMEAGENILVYPGGAHEVLKKKSDDKYELKWKQRTGFARLAIQHQYTIIPVCAIGTNEMLDIIADVPVGWAF------------------GGARGDLSVPIVKPPSPSKVQRIYFGFGKPIDTTHLNRDTSTENCNLIRDQCKTALESEISSVLH----YQHNDPNR 362          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: A0A7S4L9G8_9EUKA (Acyltransferase (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L9G8_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 8.680e-35
Identity = 89/316 (28.16%), Postives = 150/316 (47.47%), Query Frame = 2
Query:   83 LLLWPISLAWCLIQRLILALLRVGG---CRDPVKFVPPPRWLVHCMAIPFRILNPAVVLGGENLDALGRKAPSRNSRNGGTPGNAPTGAPVLLVGNHTLYGLDHIPIVDQVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSRAAASRLRAGDPGNLWLPVLLPFN--SLQRQYFVFGKPISSEGYNRDWESDAKTLELYEAVRGEVEGLIHGLQGLQRRDPNR 1015
            +L+W     + L+ + + A++ + G    +D + + PP +     +  P R+     V G +N+       P++N +             +L V NH+L G++    +  ++   G FPRGL D     +P W  + +  GGV GTR+ C  LM+NG  +L+ PGG  E   +   +KY L WK++ GF +LA++HGYT++P   VG E+ +  L  +   W ++                      +L  P+L P N   +Q+ YF FG+P+ +E     WE D    ++ E  R  +E  I  +  +Q +DPNR
Sbjct:   78 MLMWVTRSHYILLVKDVDAVMTLEGNSAVQDLLAWEPPSKSFFDRLVAPGRMFLDYEVHGIKNI-------PTKNKK-------------LLFVSNHSLAGVEMPLFIHSIYSNTGVFPRGLSDHFHFAIPFWGDVLKFAGGVDGTREVCTALMKNGDPILVYPGGGHEVLKKKTDKKYGLMWKKRAGFAKLAVQHGYTLVPCCGVGTEDMLETLVDIPADWLRK----------------------DLSFPLLKPVNPSKIQKVYFWFGEPVETEHLQDQWEDDEVVWKVREETRRRIEDGIQEMLQIQEKDPNR 351          
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Match: A0A1Y2BX47_9FUNG (PlsC domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BX47_9FUNG)

HSP 1 Score: 144 bits (363), Expect = 1.710e-34
Identity = 94/288 (32.64%), Postives = 147/288 (51.04%), Query Frame = 2
Query:  176 FVPPPRWLVHCMAIPFRILNPAVVLGGENLDALGRKAPSRNSRNGGTPGNAPTGAPVLLVGNHTLYGLDHIPIVDQVHERVGQFPRGLFDTAFSYLPIWRQLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWKEKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARSR-----AAASRLRAGDP-GNLWLPVLLPFNSLQRQYFVFGKPISSEGYNRDWESDAKTL-ELYEAVRGEVEGLIHGLQGLQRRDPNRY 1018
            + PP    V  ++ P R L P    G E +  + ++ P +                ++ +GNH +YGLD + +V  ++   G + RG+ DT    +PI + L + FGGV GT +NC  LM  GQ +L+ PGGA E    +    Y L WK++ GF +L++KHGY ++P+  VGLE+ V   FS+ +        +G  RS+      AA +     P  ++ LPV+ P+ S Q+ Y VFG+ + +  Y+ D   D +++  L   VR EVE  I   + +Q  DP RY
Sbjct:   48 YKPPSILFVRFVSAPLRWLLPLQDEGMEEVINIIKQNPKQK---------------LIFIGNHLIYGLDVVFLVIHIYLETGIYLRGIADTFHFQIPIHKHLVQWFGGVKGTVENCTKLMEAGQPILILPGGAEEVVKDSRIPPYTLIWKDRTGFAKLSVKHGYKIVPYGIVGLEDMVVHAFSIPLK--PFFAILGDHRSKDKVFNPAAHKTSIPPPVPDMRLPVIYPYLSFQKSYLVFGEIVDASEYDLD---DIESIYALRNRVRNEVETSIRKGRQIQFVDPQRY 315          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZPL7_9STRA1.030e-5338.05PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A507FM02_9FUNG7.060e-4134.35Diacylglycerol O-acyltransferase n=1 Tax=Chytriomy... [more]
A0A7Y3D7Z6_9DELT3.600e-3836.15Acyltransferase family protein n=1 Tax=Myxococcale... [more]
UPI001AC222AA8.800e-3837.40Uncharacterized protein n=1 Tax=Myxococcaceae bact... [more]
A0A7D4A1I3_9ACTN7.570e-3737.96Acyltransferase n=4 Tax=Actinomadura TaxID=1988 Re... [more]
UPI000360AFC61.710e-3637.82acyltransferase family protein n=2 Tax=Smaragdicoc... [more]
UPI0006917A917.520e-3637.14acyltransferase family protein n=1 Tax=Spirillospo... [more]
A0A7S4IME2_9EUKA1.500e-3535.17Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S4L9G8_9EUKA8.680e-3528.16Acyltransferase (Fragment) n=1 Tax=Paramoeba aestu... [more]
A0A1Y2BX47_9FUNG1.710e-3432.64PlsC domain-containing protein n=1 Tax=Rhizoclosma... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:1444729..1453020 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score155.2
Seed ortholog evalue5.7e-35
Seed eggNOG ortholog1123258.AQXZ01000009_gene1419
EggNOG free text desc.Diacylglycerol acyltransferase
EggNOG OGs2I1UA@201174,4FVCH@85025,COG0204@1,COG0204@2
COG Functional cat.I
Best tax levelNocardiaceae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons9
Model size2178
Cds size1089
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815522.062029-UTR-S-ischiensis_contig10:1444728..14447531622815522.062029-UTR-S-ischiensis_contig10:1444728..1444753Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 1444729..1444753 +
1695739746.8012922-UTR-S-ischiensis_contig10:1444728..14447531695739746.8012922-UTR-S-ischiensis_contig10:1444728..1444753Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 1444729..1444753 +
1622815522.1777291-UTR-S-ischiensis_contig10:1451956..14530201622815522.1777291-UTR-S-ischiensis_contig10:1451956..1453020Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 1451957..1453020 +
1695739746.8868105-UTR-S-ischiensis_contig10:1451956..14530201695739746.8868105-UTR-S-ischiensis_contig10:1451956..1453020Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 1451957..1453020 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815522.074724-CDS-S-ischiensis_contig10:1444753..14448541622815522.074724-CDS-S-ischiensis_contig10:1444753..1444854Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1444754..1444854 +
1695739746.8115325-CDS-S-ischiensis_contig10:1444753..14448541695739746.8115325-CDS-S-ischiensis_contig10:1444753..1444854Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1444754..1444854 +
1622815522.0856745-CDS-S-ischiensis_contig10:1445661..14457471622815522.0856745-CDS-S-ischiensis_contig10:1445661..1445747Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1445662..1445747 +
1695739746.8197904-CDS-S-ischiensis_contig10:1445661..14457471695739746.8197904-CDS-S-ischiensis_contig10:1445661..1445747Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1445662..1445747 +
1622815522.0965407-CDS-S-ischiensis_contig10:1446172..14462631622815522.0965407-CDS-S-ischiensis_contig10:1446172..1446263Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1446173..1446263 +
1695739746.827805-CDS-S-ischiensis_contig10:1446172..14462631695739746.827805-CDS-S-ischiensis_contig10:1446172..1446263Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1446173..1446263 +
1622815522.106598-CDS-S-ischiensis_contig10:1447540..14476401622815522.106598-CDS-S-ischiensis_contig10:1447540..1447640Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1447541..1447640 +
1695739746.8358374-CDS-S-ischiensis_contig10:1447540..14476401695739746.8358374-CDS-S-ischiensis_contig10:1447540..1447640Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1447541..1447640 +
1622815522.1163635-CDS-S-ischiensis_contig10:1448329..14485601622815522.1163635-CDS-S-ischiensis_contig10:1448329..1448560Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1448330..1448560 +
1695739746.8439946-CDS-S-ischiensis_contig10:1448329..14485601695739746.8439946-CDS-S-ischiensis_contig10:1448329..1448560Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1448330..1448560 +
1622815522.1329334-CDS-S-ischiensis_contig10:1449261..14494891622815522.1329334-CDS-S-ischiensis_contig10:1449261..1449489Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1449262..1449489 +
1695739746.8519745-CDS-S-ischiensis_contig10:1449261..14494891695739746.8519745-CDS-S-ischiensis_contig10:1449261..1449489Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1449262..1449489 +
1622815522.142878-CDS-S-ischiensis_contig10:1450264..14503901622815522.142878-CDS-S-ischiensis_contig10:1450264..1450390Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1450265..1450390 +
1695739746.8600261-CDS-S-ischiensis_contig10:1450264..14503901695739746.8600261-CDS-S-ischiensis_contig10:1450264..1450390Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1450265..1450390 +
1622815522.1526356-CDS-S-ischiensis_contig10:1450833..14509041622815522.1526356-CDS-S-ischiensis_contig10:1450833..1450904Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1450834..1450904 +
1695739746.8684895-CDS-S-ischiensis_contig10:1450833..14509041695739746.8684895-CDS-S-ischiensis_contig10:1450833..1450904Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1450834..1450904 +
1622815522.1623163-CDS-S-ischiensis_contig10:1451901..14519561622815522.1623163-CDS-S-ischiensis_contig10:1451901..1451956Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1451902..1451956 +
1695739746.8775675-CDS-S-ischiensis_contig10:1451901..14519561695739746.8775675-CDS-S-ischiensis_contig10:1451901..1451956Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 1451902..1451956 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1397.1prot_S-ischiensis_contig10.1397.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 1444754..1451956 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1397.1

>prot_S-ischiensis_contig10.1397.1 ID=prot_S-ischiensis_contig10.1397.1|Name=mRNA_S-ischiensis_contig10.1397.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=363bp
MYEYEGSSRERVWKGIIRPLLLWPISLAWCLIQRLILALLRVGGCRDPVK
FVPPPRWLVHCMAIPFRILNPAVVLGGENLDALGRKAPSRNSRNGGTPGN
APTGAPVLLVGNHTLYGLDHIPIVDQVHERVGQFPRGLFDTAFSYLPIWR
QLAEAFGGVVGTRKNCEVLMRNGQCLLLCPGGAREAYLRAAREKYQLRWK
EKMGFVRLAIKHGYTVIPFASVGLENSVTVLFSVDMGWCQRLTRVGLARS
RAAASRLRAGDPGNLWLPVLLPFNSLQRQYFVFGKPISSEGYNRDWESDA
KTLELYEAVRGEVEGLIHGLQGLQRRDPNRYPLTRAWRWCLSRMGLVKDY
DRAVRTAFPGPS*
back to top

mRNA from alignment at S-ischiensis_contig10:1444729..1453020+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1397.1 ID=mRNA_S-ischiensis_contig10.1397.1|Name=mRNA_S-ischiensis_contig10.1397.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8292bp|location=Sequence derived from alignment at S-ischiensis_contig10:1444729..1453020+ (Schizocladia ischiensis KU_0333)
ATTTTCTCTCGAGTAGAACGCGGAGATGTACGAGTATGAGGGGAGTTCCA GAGAGCGCGTCTGGAAGGGGATAATAAGGCCCCTGCTGCTTTGGCCAATC AGCTTGGCATGGTGTTTAATTCAAAGGTAAGTGGTGAAATCAGCAGGGGA TGGACCGCGTCCCGAAACGGAGCCTCAAGGGTGGCCTTTCGTTGCTCGCA CGATCTGGTTTGATGTAGCGTGGTGCGATATGTACTCTACTATACTGGAA GCACTGCGTTTTTGCGTCAAGGCACATCACAAAATAGTAGTAGATTCTCA ACGGTGGCCCTTCGCGGGTGCAGGATGAAGAAAATGAACGCAAATGACAG GAGCTTGTTGCGGAACGCGCAGGGGGCAAAACTTATGTACCAAATGAAGG GGGCGGTTGCTTGGTCTCAAATTGTTTTACTATCGTGGCAGTGCACTTCG GCAATACTGACAGGAACAACCGCGAGGTCCAGGCCACGTCACTAAAGACC TTCGGCAGTAGGTATGGAGCTCTGCAGTACAACTGTAGTATGTTGCACAC CCTACGGTGCGGTGGAACCCACTTTGACGTGGACCGTTGCTAATTGAGCA TGACTCGACGTACCAGGCATTGTCAGCTGCAGGCCGTTGTCAGCTAATGC TAAGTTACTGCATGTGCCAAGTACACAGCGGCGATGCTACCAACTGCAGT ACGTGAGCTTAGGCGGGCGCCGCCGTAGTAGAGTACTGTTACAAGCTGTA CTATTCGATACTCGTACCATAGTACTGATGTGCTCACTCTGCTCTGTGTA CAAGTACTTCCAAGCGCAGGACAGGTTAGTTTTTTTAGGTTAGTCAGCGT GAAAGTGTGACCAGTTGAACTTCGCGCCAGTCGCTCCTGACCCCCACCCC ACCCCCCCTCATGGGATACGGCCCCTCGTTTAGGCTCATCCTGGCCCTGT TGCGAGTTGGGGGCTGCCGTGACCCGGTCAAGTTTGTCCCCCCCCCGCGT TGGCTCGTGCATTGCATGGGTGAGGAGGGGCACAGTCCGTTTGCTTCTCT CAATCCCCGTCTGTCTGCTGCCTTGCCTTGCCCTGCCGTGTGATGGTCCT GCACATGTGCAGTAGATTACTTCGACGTATGCGATGAGCTGCTGCTGCCG CCGCCGTCGCCACTGCTGATTGCTTGGGAGAGCTGTTTCACGCTGTTGTC TTTGGTCATGTAGAGTACTGCCTCTCTTGCTGCCTGACCACTGGTGCCTC TTTCCCTGCCCCCCTCCCTCCCCCGCCCCACCCACTGCATAGCCGTGCCT GTTCCTCACACATATGTTGGTTCGTGAGAGGACACATCTGAGGCGGGGAG TCCCCCGACAGCCCTCTCTATTCACCCCTCTCATTTCCCCGTGTCATCAC CGTGTCTGTCTCCTCTCTGTCTTGTCCTTCTCTCCACGAGCTAGCGATTC CATTCCGAATTCTGAACCCAGCGGTCGTTCTCGGAGGGGAGAACCTGGAC GCCCTGGGCAGGAAAGCACCTTCCCGGAACAGCAGGTAAGTTGACGTCAC TGTTCGAATCATATGTCCAGTACTGTGCTGTGTCGTGATTTACGGTACAG TAGGTGGGGGTCCCTCACACTACACGATTGTACCTCGTTACAATTTATAC GTAGTATGAATCAACGTCCCTCACACGACACTGGCCATCACGCCAAGCCC CCTTGGGAGTTGTTCAAACGGCAGATTGAATTCTGTGGGCTCCGCCCTTG TCCAACCTTGGATGGCGTTTGCAGTTGGCCTTCAACTCTCCAAGTGCGAG GCGTGTCAGGCGTTTCAAAGCTATCGCCTCTGCATATCTGCCAGAACTCC GCTCAAGGATAGCCCCAGCATATCCTAGCTGCTTGATTGTACCCCAGAAC GTACTTGAGGTGCACCACTGCACATCGCGCTGCGCCACACAGACTCAATG CCCCTGAGTATTCGTTGACTGCTGATTGCGAGTCGCCAAAACCACGCCAT GCCGTAACAAGGTGGCTCACTTTTTTCCCCCCCCCTGCTACTCCTGCCCA CTAGTGCGGCACTTCTGTACTGTACAGTTTTTCAAGTTCTCCATGTACTA GCAAGTACTACAGTACTGTGCTGTAGTGTACTACTATGTAGCACTTCTGG AATTACTCGGAAGTAGTGCATTTGGCATGTACTGTACTGTACTGTGCTGT GCTGCACTGTACTGGCTGTAGATGCCCGAAAGGTGCACTTAGGTACTGCA TTAACCTCGTGCTTGCCATGGCACACTTATGCATGTCCATTGTACCCCGC CCTGCCATGGTAAACTGTGGAGGGATGCAGCAGTGTGCCTGAAACAGAAG AAATTGCCCCAGCTTGACTGGTTGTAGTTTTTATACTTCAAAGTACTTCT CAAATTATTTTGGCGGCGCTTGTTTGGGAATTTGTTTTGTTTGCACCGGC ATGCACTCATCTTGAGAAGGCGTGCTAATAGGCAGCATTTTAGCGCAGCC ACGTTTCGGAGGGTCTGCGCGGTTTGGCCCGCTTTCCCCATGAACGACCA TTGCCGCCGAACCTTCTACAGTTCTTCAAATACCACTACGACCAGTCTAC GTGCTACAGTAGTGCGTTTGTGGAGTGGCAGTACTCTGGAGAATACAGAA AATGCGGGCGATTCTGATTCTGTTTGGCGGTGCTTGGCCGCAGCCATTCT CTCTTTGCTTGCTTCAAAATAAATAGCTGACATGCCCTGTTGATCGACAT CGCCCCGCGTGCTCGCCCTGTCCACCCCCGCCTTGCCTGGCCCCGTGGTC GTCAACACCAAGGAACGGCGGTACTCCTGGCAATGCTCCCACGGGCGCGC CTGTGCTGCTGGTGGGAAACCACACCTTGTACGGCCTGGACCACATCCCC ATTGTCGACCAGGTGAGGAGTCACGCCGTACAACATATGTTCATACAGCT CACGTAGTGCTTGCCGCAGTCCCGAGGACATTGACCGCTATAGTGCCGTA CAAAAGGTAAGTTCCGCTACTCACAGTGCACGCGTTTCCCCGTTGCCTTG GTGGCACCTATGGTGGATGGCATGTTGTGCCACAGATGGCGCACGTGCGA TAGGCCAGGCGCTGCCCAATAGGAATCACTTCTACGTATATTGTGCGGTA TTTCCAAGTACACGGCGGACTGTGCAATAGACTGCTCGCTCAGCATGGTA GGCGATAGGCGATACCTCTTGTGCTTGTAGAGTGATAATTTTACCGTGCC GTACCGTACTGTTGGCCCATTTCAAGTATATGCGGCGTGTATATACCGCC CACCTGCTTGGTACTTGGAATACATAGTGTATGAGTACGAGTACTCATGT ACATGGTACGTACTTCCAGTAGAGTACATGCAGTACAAATGTTGGTAGGC TGTTTTGGTCAGGGAAGCGCACCGAACAGACCCGCGTACTCTATAGCTCT AGACCCCAACCAAGTTGAACCGAGCCTCCCAAACAACAGAACCGCGGCTT CATTCCTCCAGTCCTCCCCCCGGTGACCGCTCAAAACTTTTCTCGAGATG TGCACTTGGCCGCCCGTGATTTAAGTAGACTCCTTGTTTGCCAACCACCA GGTGCACGAGCGGGTGGGGCAGTTCCCGAGGGGGCTGTTTGACACGGCAT TCTCCTACCTGCCCATCTGGCGACAGCTCGCGGAGGCGTTCGGTGGCGTG GTGGGCACTCGCAAGAACTGCGAGGTGCTCATGAGGAACGGGCAGTGCCT GCTGCTGTGCCCAGGGGGGGCGAGGGAGGCGTACCTGCGGGCGGCCCGGG AGAAGTACCAGCTCCGGTGGAAGGAGAAGATGGTGAGGTGGCACGGATGT ACTTACGTGTGCCTGGAAGTACCATGGAAGTACTCGTACACTTGCACTGC CACGTACTTGCTCACACCCAACTACACCTGCGGGGCGCTTGAGTTCTGCA AATTGTTCACTTTGCTGCGTGTACTACTGTATAGTACAGTACAGTGTCCT CGTACAGTATGTACTACTGTACAGTAGTAGATTTGTGGTGCTCTGGAGAA TCCATCACCGTCCGCTTCTGCAAAGTGGGGTGTGGTTTAGTGCTGCAGGG GTTCAAACATGTGTCCCGCAGGAAAAGGGGGGGGGGCTGCGATGGCTAAG CCGCGCTGAGAAAATTGACTTTTCAAGCGAGAGCTAGTCAAGAAAAGGAC TTTGCGTGCAATTGTACAGGTATGAGGCGCACAAGACGTCCAAGGCGCGC CCAAGGAGTACAGCAATCGTCGACAATTATTTACTCGTGTACTGCACTGT GTATTGTACAGTCGTAGAGTGCGGGAAAGCTGCACCTCTCTGGCTACGTG TCCATGTGGGTGCAGTGCTATTGTACTGTACACTGCGTACAGCGGTATGT ACTCGAGTACTTACTGGTACAGCACAGTCCTGTACAGTACTTCATACCTG GTACTGCGCTGTACTCGTGCAAACTTTTCCAAGTGAAACCTTGGAAGCAC TGGAAGTAACCGCAACTTGACTCGCGGCGGCAGGGTTTTGTCCGCCTGGC CATCAAGCACGGGTACACCGTCATCCCATTTGCTTCGGTGGGCCTGGAGA ACTCGGTGACCGTTCTCTTCTCCGTGGACATGGGCTGGTGCCAACGCCTG ACCAGGGTGGGTTTGGCCAGGTCCCGGGCAGCGGCCAGTCGGTTGAGGGC GGGGGACCCAGGGAACCTGTGGCTGCCTGTTCTGCTGCCCTTCAACTCCC TTCAGCGGCAGGTGCAGTGGGCTGGAATTGTTTCACAACTAGTTCCCAAG TACTCATCCACGGATTGCAGTACAGTAGTCATTGAGCTCCTTGGTGACGT GGTCCGCACCTCGCAGCGTTGTTCCTGCCAGTGCTAACCATAGTTGCTCT ATTTGTAAACAGCTTCAACAGTTTTGTTGCCTCAAGTATATATGTACTCA CATGTGCTTGCACTAGAAAAGGATCTTCCCAAGGAGAAAAATAGTAGTAG TGATCAATTATGCACTACACATTTAAGTGTAACCAGACACTGCGTAATAC ATGGTTACTCTACTACAGTACATTTCCGGTAGAGCACTTGAGGCTTGGGG TGCAAAATGTCGTGTAGGTACTGTACTATGGTGCAGTGCTAGTTGTACTT GTACTTCAGAAGTACTTGTAGCCGTGCCAGCACAAGCCTGACCTGGGGCC CCCAGCATGTACTGTGCTTCGCAGTACGACTGTACAATATACTAGAAGTT TGTACGTGCTAAGCACTCACGATGCAATGCGAGCCGTGCTGGCAGCTTTC AAGACCGCGTTCTGGCGGGCCAAACCTGCCCTCTGCAGCAGGAAACGCCT TCTAAGAGAGCAAGAAAACCGTGGGGAAGGACCACAGCGTTCCAGGTCTT CAAATCGTGCTTGGCAGTACATTTTTCATTGCGGGATTTTGCATCATGTG TATTGTACCTCATGTATTCCGAATGCTAATGCGTGTCGCCAATACTGCCC CCACCCCCTTCTTCCCCCACCGCGCTCCCTGGGCAGTACTTTGTGTTTGG GAAGCCGATATCGTCTGAGGGGTACAACCGAGACTGGGAGAGCGACGCCA AGACCCTGGAGCTGTACGAGGCGGTGCGGGGGGAGGTGGAGGGACTCATA CATGGTCTGCAGGTGGGTGGTGGGTGGGTGGGTGGGTGGGTTGGTGGCGC TTGTGGTGGTGGTGCGCCGCGGCGTGGACCGTACTGCCATGCCTTGCTTG CTGTGCCGTCGAGATTGCAGTACATATACTTCCGAGGGGAGGGAGGGGGA CAGCTCCGTCTCGATCGAGGCGCGTGGACAATGCTCTCGGGACTACTTAC CTTGAGTACTTCGAAGTACTTCCAAGTACATATGTATATACCTCAAAGTA CTTCCAAGCATCTAAGGGGAACAATACGAGCGAGGTGCAGACCACATCAC TAAGCACCTCCACAGTGGACCTTCCTTGGCTCGCCAGAGAATAACGGTAC AGTAGAGCTCAGGCTTGGTCTCCCGGCCGCGCCGCTGCTCACGCTGCTCC TTTCCTCTCATCTCCTCTCCTCCCCTCCCACCGTGACCTGCCTGCCTCCA AACAGGGCTTGCAGAGGCGGGATCCGAACCGCTACCCTCTCACACGAGCA TGGCGCTGGTGCCTCAGCCGCATGGGGTAAGTCCCGACCTACTAGTAAGT TTTCCTTCACACGCCTGCCGGTCGCAAGTATGTGATATGTGCCACCTCGG GCTTTGGTTTGGGAAAGCAGCTCACGGGAAACGCGGTACTGTACCATTTT GGCAACCTGGCCGCTCAAAGACAAGCAAAGACTTGGGTAGAAGCCATGTG CTGCCAGTCAGTCTGTACTCGTGCTTGGAAGTGTGTACTCTAGCACAGTA CGGCAGCACTTGTTGTTTTGAGGTGTTGTCGAGTGCTACACGAGCGTGCT TGGCTTGCCGGAGGGTACCGTATGTATTTCCAAGTACGGTATATATGCCG GGTATGTACTTGAAGTACTCACGTGGTGCTTGCCGTAGTCCCGAGACCAT TGACCACGGTGTATACTCTTCGTACTCGTACACATTAGTGCATAGTTCAT ACAAAGTAGAGTAGATACAGTACTTGAAAGCTTTTACGCTGCTCAAAAAT TTCCAAAGGATGTACTACCTGTTCTTACGTGCTCGCACGGGCGTTTGTGG CCTCTTCTTGTCATCGCACGCCCCCCGGGCAAGTCCAGGGCACTCACCCT GATGCTTCCTTCTTTGGACTCTACCTGGTACTCTACTACAAAGGGTTTAC TCGAGATGCTTCGATACTCCAAGCGCTCCAAGTTGCTCCCACTATACTAT TTACCTAGTGCAGACATCTACGTCCCGCAGTCTGGCTTTGCAGGCAGTGG CAACCGCGCGGGAGGCCTGGTCCAAGTGTTTTAACCGGGCCTTCCTCTCT TGGGAGCAGCGCGTGCTCAATGTTCCCACGTGTTCCCACGTGTGCGACCG TCGATCTATCGATGACAGGCGCAGGCGGTGGTGCCGTTCGCAGCAAAGCC TCGCTACTTTATAGCGTCACGTCTCGTGTCAAAAGTGGCTTCACACACTT GCCGAGCGCCGGCGTCGCTGGCTGACCTGACGCAGAGTGCACTGACCCTC GTGAACCGCGCACGCCTGGACAGGTTGGTGAAAGACTATGACCGGGCCGT GAGGACGGCCTTCCCCGGGCCAAGTTGACCTGTCCAGAGCAGTGCCGTGG AGGGCTCTACGGTGCTGTATCGCAATTGAGGTTTGAGCAACAGACGCTGT CGTGTAGGTGGGTGTCGCGGGGGCGTGAGACCATGCCCGTGGTGACTCCG TGTTGGACCCTTCCACCCGCTAACTACTTCTTGGGGGAGCAGAGGAGTGT CCGCGCAGTGAGTTGATGGAGGCTGCAGGGGGAGGGCTACCAACTGAGGC CCGATATCTGGTGTACGTGACCTGACCGGATAGGGAGCGTGCATGACCCG GTGGAGGTGTGGCAGTGGCAGTTGTGCTAGTGTACTCAGTGGCTGTGAGA GGCGTCACGTCTACCCCCGGGACGGGGACATGAAGAGTTGGCATGCTACA GCAGTACAAGTACTGTGTGTGACCATGTTTGCTCTTGAGACAGACAGACT CAGGCATGTGCCACAGTACCCCGCCTTGTGGTGAATCAAGCGAAGGGATT TCGTGGCACAAAGTACTTCATAGTACTGCCACTGCTACTTTAGTATTAAC AGGAACAACACAGGGTGAGCTGCAGGCCATAGCGTACTTGGCGTAGAGTA CCTGCTGTACAGTACCTGTACAGTGTGTGCCGTACAGCAGGTTCACGCTG TGGGGCCAGGCAGCGGATTGGCCGGGGCCCTAACTAGGCCCTCACTAGCT GCTGGGGCTTTACGACCTGGCCTTTCCCGAGGCAAGGGGGCACCTGACTC GGTTTGGAGCTCCAGAGGACTGTGTGACTATGTCCTAGCTCTTCTTGTAA AGTTGATTGTAAATAGGCAAGCGAGTTCCGGGCCAAAACGGCCATCCCAT TGCCGCGCTGCCGCCCGAAGTAGCTCACACTGGCGTCCTGCGGTCATGAT TGGTTAATGGCCCTCTTGAACGGCCCTGGCACGGGAGCATCCTGTTTGGT GGCACGCAGGGACGACAGTAGCAAGTAGAGCTTAACAAGTTTCCGTAGGT ACATACATCAACTTTATGCTAAGCGTTGTGATGTAAGTAGTCATGATTGG AACACTTCCAAGCACTTTAAACGTTTTGAACGGGGTACTCCG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig10:1444729..1453020+

>mRNA_S-ischiensis_contig10.1397.1 ID=mRNA_S-ischiensis_contig10.1397.1|Name=mRNA_S-ischiensis_contig10.1397.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2178bp|location=Sequence derived from alignment at S-ischiensis_contig10:1444729..1453020+ (Schizocladia ischiensis KU_0333)
ATGTACGAGTATGAGGGGAGTTCCAGAGAGCGCGTCTGGAAGGGGATAAT
AAGGCCCCTGCTGCTTTGGCCAATCAGCTTGGCATGGTGTTTAATTCAAA
GATGTACGAGTATGAGGGGAGTTCCAGAGAGCGCGTCTGGAAGGGGATAA
TAAGGCCCCTGCTGCTTTGGCCAATCAGCTTGGCATGGTGTTTAATTCAA
AGGCTCATCCTGGCCCTGTTGCGAGTTGGGGGCTGCCGTGACCCGGTCAA
GTTTGTCCCCCCCCCGCGTTGGCTCGTGCATTGCATGGGCTCATCCTGGC
CCTGTTGCGAGTTGGGGGCTGCCGTGACCCGGTCAAGTTTGTCCCCCCCC
CGCGTTGGCTCGTGCATTGCATGGCGATTCCATTCCGAATTCTGAACCCA
GCGGTCGTTCTCGGAGGGGAGAACCTGGACGCCCTGGGCAGGAAAGCACC
TTCCCGGAACAGCAGCGATTCCATTCCGAATTCTGAACCCAGCGGTCGTT
CTCGGAGGGGAGAACCTGGACGCCCTGGGCAGGAAAGCACCTTCCCGGAA
CAGCAGGAACGGCGGTACTCCTGGCAATGCTCCCACGGGCGCGCCTGTGC
TGCTGGTGGGAAACCACACCTTGTACGGCCTGGACCACATCCCCATTGTC
GACCAGGAACGGCGGTACTCCTGGCAATGCTCCCACGGGCGCGCCTGTGC
TGCTGGTGGGAAACCACACCTTGTACGGCCTGGACCACATCCCCATTGTC
GACCAGGTGCACGAGCGGGTGGGGCAGTTCCCGAGGGGGCTGTTTGACAC
GGCATTCTCCTACCTGCCCATCTGGCGACAGCTCGCGGAGGCGTTCGGTG
GCGTGGTGGGCACTCGCAAGAACTGCGAGGTGCTCATGAGGAACGGGCAG
TGCCTGCTGCTGTGCCCAGGGGGGGCGAGGGAGGCGTACCTGCGGGCGGC
CCGGGAGAAGTACCAGCTCCGGTGGAAGGAGAAGATGGTGCACGAGCGGG
TGGGGCAGTTCCCGAGGGGGCTGTTTGACACGGCATTCTCCTACCTGCCC
ATCTGGCGACAGCTCGCGGAGGCGTTCGGTGGCGTGGTGGGCACTCGCAA
GAACTGCGAGGTGCTCATGAGGAACGGGCAGTGCCTGCTGCTGTGCCCAG
GGGGGGCGAGGGAGGCGTACCTGCGGGCGGCCCGGGAGAAGTACCAGCTC
CGGTGGAAGGAGAAGATGGGTTTTGTCCGCCTGGCCATCAAGCACGGGTA
CACCGTCATCCCATTTGCTTCGGTGGGCCTGGAGAACTCGGTGACCGTTC
TCTTCTCCGTGGACATGGGCTGGTGCCAACGCCTGACCAGGGTGGGTTTG
GCCAGGTCCCGGGCAGCGGCCAGTCGGTTGAGGGCGGGGGACCCAGGGAA
CCTGTGGCTGCCTGTTCTGCTGCCCTTCAACTCCCTTCAGCGGCAGGGTT
TTGTCCGCCTGGCCATCAAGCACGGGTACACCGTCATCCCATTTGCTTCG
GTGGGCCTGGAGAACTCGGTGACCGTTCTCTTCTCCGTGGACATGGGCTG
GTGCCAACGCCTGACCAGGGTGGGTTTGGCCAGGTCCCGGGCAGCGGCCA
GTCGGTTGAGGGCGGGGGACCCAGGGAACCTGTGGCTGCCTGTTCTGCTG
CCCTTCAACTCCCTTCAGCGGCAGTACTTTGTGTTTGGGAAGCCGATATC
GTCTGAGGGGTACAACCGAGACTGGGAGAGCGACGCCAAGACCCTGGAGC
TGTACGAGGCGGTGCGGGGGGAGGTGGAGGGACTCATACATGGTCTGCAG
TACTTTGTGTTTGGGAAGCCGATATCGTCTGAGGGGTACAACCGAGACTG
GGAGAGCGACGCCAAGACCCTGGAGCTGTACGAGGCGGTGCGGGGGGAGG
TGGAGGGACTCATACATGGTCTGCAGGGCTTGCAGAGGCGGGATCCGAAC
CGCTACCCTCTCACACGAGCATGGCGCTGGTGCCTCAGCCGCATGGGGGC
TTGCAGAGGCGGGATCCGAACCGCTACCCTCTCACACGAGCATGGCGCTG
GTGCCTCAGCCGCATGGGGTTGGTGAAAGACTATGACCGGGCCGTGAGGA
CGGCCTTCCCCGGGCCAAGTTGAGTTGGTGAAAGACTATGACCGGGCCGT
GAGGACGGCCTTCCCCGGGCCAAGTTGA
back to top