mRNA_S-ischiensis_contig10.1281.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: A0A835ZF95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF95_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.440e-56 Identity = 105/169 (62.13%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 274 ERSQKMRLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVRLQLEDDNSTVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLI-LEERPG 777
E+ QKMRLREE E+PFRKVRLF SF S TVG LIA LR +AL++GIDQGQ+F EL NI IDL AI SA LI+ DLAAQ RL RMEIGAKLA L+VR Q+E + +T+ LSA RR RGRDKRVA++ GG D V+ASL +A+PY++ L +DI+++PL LEE G
Sbjct: 40 EQMQKMRLREEVENPFRKVRLFFLYSFVASGTVGFLIAALRTIALTQGIDQGQAFPELAQNIGIDLAAIIGSALLIKRDLAAQNSRLVRMEIGAKLAGLKVRTQVESEEATIPLSAFRRQRGRDKRVAIVVGGADAVAASLSTAIPYSDELDRADIVLVPLSQLEEAVG 208
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: A0A6H5JFG1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFG1_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.830e-54 Identity = 128/247 (51.82%), Postives = 162/247 (65.59%), Query Frame = 1
Query: 61 SRMRVSQTLLGAFIGGLVGC-----TRGFSNSWAGAGRLAAPRGLGQAPAAAAGISLARRPTARRACLG--MQFDREQERSQKMRLRE-EAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVRLQLEDDNSTVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLILEERPG 777
SR V+ LL GG +G T G S W G + G+ A+AA + R T RRA G MQ E+ R K+RLR+ + + +VR+F F SF +SATVGLL+A R +AL++GIDQGQS EL NI +D+ A+ V L++ DL AQ+GR+ARMEIGAKLA L+VRLQ +DD STV LSALRRDRGRDKRVAV+ GG + V +SL+SALPY +AL SDILI+PL+LE R G
Sbjct: 4 SRALVTLCLLACSCGGALGFRPQARTIGGSR-WTGDHDVVCETSSGKTSASAALWPSSSRST-RRAARGLTMQQTDEEARRTKLRLRQRKVVNSQVQVRIFLFSSFVLSATVGLLVAGTRTIALTQGIDQGQSMTELLTNIVVDVTAMAVFVGLVKRDLDAQEGRMARMEIGAKLAGLKVRLQTKDDLSTVTLSALRRDRGRDKRVAVLVGGAETVKSSLESALPYGKALETSDILIVPLVLESRSG 248
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: A0A7S3XN54_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN54_HETAK) HSP 1 Score: 134 bits (337), Expect = 6.270e-34 Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 280 SQKMRLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVRLQLEDDNSTVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLIL 762
++K+RLREE E+PFRKVR+F +G+ SA+VG LIA R+LA G+ GQ +EL N+ IDLGA+ + + L+RN+ A Q L RM GA++ASLRVR Q+E LS RR RG DKR+ + G ++V SL A Y+E L +D+L IP+ +
Sbjct: 68 ARKLRLREETENPFRKVRMFGYGAAVASASVGFLIAATRLLAKGTGVQGGQEVDELLQNVGIDLGAMVLFSVLLRNEYAVQAKILERMAQGARIASLRVRAQVEGTTKQATLSDFRRGRGMDKRLVIFVGSDEIVEKSLIEAEAYSEKLVQNDLLSIPVAI 228
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: A0A0G4E9P3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E9P3_VITBC) HSP 1 Score: 132 bits (331), Expect = 1.510e-33 Identity = 74/157 (47.13%), Postives = 107/157 (68.15%), Query Frame = 1
Query: 292 RLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVRLQLEDDNSTVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLIL 762
+LREE ESPFRKVR + + A A V L+A+ + +A GI+ + E N+AID+ AI V AFL R DL +Q R R+ GAKLA+L ++LQ+ DD++ V+L+ LRR RGR+KRVA++ GGK+ V SLDSA+P + L +D+L++PL++
Sbjct: 11 KLREEVESPFRKVRFALYIAGAAGAAVSGLVALTQTIAALSGINV-ELLPEASRNLAIDVAAIAVIAFLWRRDLISQNSRYERISQGAKLAALGLQLQMADDSNVVSLADLRRRRGREKRVAIVLGGKEAVQRSLDSAVPVSSELLANDLLVVPLVI 166
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: A0A7S2ED17_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ED17_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.980e-22 Identity = 74/189 (39.15%), Postives = 100/189 (52.91%), Query Frame = 1
Query: 268 EQERSQKMRLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVR-----------------LQLEDDNSTVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAE-ALGGSDILIIPLILEERPGP 780
E E S ++RLREEAESPFRKVR FG+ V A L ++ R+ A G++ EE N ID + V FL++ D AQ+ RL R GA+ A L VR + ++VALSALRR RG DKRV + AGGKD +S L A + AL +D++I+P++L + P
Sbjct: 111 ENEYSVEIRLREEAESPFRKVRFLGFGALLVGALTSLAVSTARIAAALAGVNT-DLMEESVTNAVIDTAGVIVLGFLLKRDGDAQESRLKRAAKGAEFAKLAVRGSSSLLEGAAAGTSSGSVSAGKSTTSVALSALRRGRGVDKRVVIAAGGKDKISDVLKEAKALGDDALSVNDLVIVPVVLPQCTAP 298
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: R7Q5I6_CHOCR (DUF4174 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5I6_CHOCR) HSP 1 Score: 95.5 bits (236), Expect = 8.790e-20 Identity = 63/161 (39.13%), Postives = 93/161 (57.76%), Query Frame = 1
Query: 280 SQKMRLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVRLQLEDDNSTVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLIL 762
SQ+ RLREE E+PFRK R+F + A SA VG IA LR++A G+ Q E N+ I+L I V A L+R ++ A + RL RM GA++ASLRV+ D+ T + L+ RGR RV ++ G +D V ++ A L S+++I+P ++
Sbjct: 26 SQRARLREETEAPFRKARMFVYAGSAASAGVGAFIAGLRIIAALIGVSGTQPLNETVPNVGINLAVITVCALLLRAEVKAGERRLERMSRGARIASLRVQ-----DSVTQQVLRLKDLRGR-TRVVLVTGTEDKVLDAMSRAEAVKSGLSESNLIIVPHVV 180
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: A0A1Z5J7C3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7C3_FISSO) HSP 1 Score: 95.1 bits (235), Expect = 9.410e-20 Identity = 61/171 (35.67%), Postives = 93/171 (54.39%), Query Frame = 1
Query: 295 LREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVR--------LQLEDDNS-TVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLILEERPGP 780
+REEAESPFRKVR + + A A L+++ RV A GI+ + +E N+ +D I V FL + DL AQ+ RL R GA+LA L VR + + D T +LS RR RG +KR+ + AGG+ ++ + A ++L SD+++IP++ + P
Sbjct: 1 MREEAESPFRKVRFLLYLTLAGGAAASLVVSAARVAAALSGINP-ELLQESSINVVVDALGIAVLVFLFKRDLDAQESRLKRASRGAELAKLMVRGSKAILGDVDVNDGQIFTASLSDFRRGRGIEKRIVIAAGGRSIIEQVIQEATRLEKSLTLSDLIVIPVLFPDGRAP 170
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: L1IWA7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IWA7_GUITC) HSP 1 Score: 95.1 bits (235), Expect = 3.470e-19 Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 280 SQKMRLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAID-LGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVRLQLEDDN-STVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLILEE 768
+QK R REE ESPFRK+RLF F + A SA +G IA R+LA+S G+ G F++ N ID LGA G A L NDL A+ L R+ KL++L +++ E +++ + A R+ R R+A+IAGGKDVV + + A AE L +++PL L++
Sbjct: 66 TQKQRFREEIESPFRKIRLFLFPAAAASAALGAFIAGTRLLAISTGVT-GYDFDQTLQNFGIDVLGATGF-ALLYWNDLNARDRDLVRIARSGKLSTLTLKIVSETGREASLPMKAFRKQR----RIAIIAGGKDVVQVAREMARAGAEDLTKVGAIVLPLQLDQ 224
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: B7FR70_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR70_PHATC) HSP 1 Score: 93.6 bits (231), Expect = 1.100e-18 Identity = 62/181 (34.25%), Postives = 97/181 (53.59%), Query Frame = 1
Query: 274 ERSQKMRLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVR------------LQLEDDNSTVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLILEERPGP 780
E S+++ LREEAESPFRKVR F + S A L ++ RV A GI+ +E N+ +D+ + V + D AQ RL R GA+LA L VR + + T +L+++RR RG +KRV + A GK+ ++ L+ ++ A++L SD+LI+P+ + + P
Sbjct: 61 EYSRELYLREEAESPFRKVRFFFYYSLGAGALTSLAVSASRVAAALAGINT-DLLQESAINVGVDVAGLVVLGLAFQKDKEAQDSRLKRASKGAELARLTVRGSKSIITGDLPNVNEASETFTTSLASMRRGRGIEKRVVIAAAGKEKIAEILEDSIKLADSLVMSDLLIVPVEMPQGLSP 240
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Match: A0A7S3SCY3_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SCY3_EMIHU) HSP 1 Score: 92.8 bits (229), Expect = 4.590e-18 Identity = 66/172 (38.37%), Postives = 96/172 (55.81%), Query Frame = 1
Query: 280 SQKMRLREEAESPFRKVRLFTFGSFAVSATVGLLIAVLRVLALSRGIDQGQSFEELGGNIAIDLGAIGVSAFLIRNDLAAQKGRLARMEIGAKLASLRVRLQLEDDNS----TVALSALRRDRGRDKRVAVIAGGKDVVSASLDSALPYAEALGGSDILIIPLILEERPGPG 783
S + RLREEAE+PF K RLF + + +A V A +LA++ G + + ++ IDL A+G + FL + +L A+ RL R+ GA+LA+LRV QL T L+ LRR RG+ +RV ++A D + SL +A A L +DIL++PL L PG G
Sbjct: 60 SSQQRLREEAEAPFAKARLFVWPTLFAAAVVATYFAATGMLAVAVGAREQAAGSSPLVDLGIDLTAVGTTGFLWKRELDARDSRLRRIAFGARLAALRV-TQLGAGGGAFGQTATLADLRRGRGQARRVVLVAAPSDALKQSLAAAAASAAELLAADILVVPL-LSLPPGRG 229 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1281.1 >prot_S-ischiensis_contig10.1281.1 ID=prot_S-ischiensis_contig10.1281.1|Name=mRNA_S-ischiensis_contig10.1281.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=239bp MRVSQTLLGAFIGGLVGCTRGFSNSWAGAGRLAAPRGLGQAPAAAAGISLback to top mRNA from alignment at S-ischiensis_contig10:549599..551615- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1281.1 ID=mRNA_S-ischiensis_contig10.1281.1|Name=mRNA_S-ischiensis_contig10.1281.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2017bp|location=Sequence derived from alignment at S-ischiensis_contig10:549599..551615- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:549599..551615- >mRNA_S-ischiensis_contig10.1281.1 ID=mRNA_S-ischiensis_contig10.1281.1|Name=mRNA_S-ischiensis_contig10.1281.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1434bp|location=Sequence derived from alignment at S-ischiensis_contig10:549599..551615- (Schizocladia ischiensis KU_0333)back to top |