mRNA_S-ischiensis_contig1.315.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.315.1
Unique NamemRNA_S-ischiensis_contig1.315.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.500e-13
Identity = 84/242 (34.71%), Postives = 113/242 (46.69%), Query Frame = 3
Query:  444 TPLSMAACSGCPKAVRALLRACPAINRQSGLFHRT--ALGSAAQMGHAEVVSELLKGGADPSITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASA-LGRGGC---VDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYD----ENEDEDRIVTAPENAPANRAWCRRGWLVVARA 1139
            TPL +A  +G    V+ALL A P  +    +++R+   L  AAQ G A V+  +L+ G D +   DG   LH+AA   R+A +  LV +G             +   +     TP   A +    E    L + G ++ A D  G T L +A+   GR G    VD LLR GADETA N D    AEVV              EY       +D +R+    ENAPA+RAW RRG LV+ RA
Sbjct:  122 TPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGA------------HVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI----------EYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.940e-13
Identity = 83/242 (34.30%), Postives = 113/242 (46.69%), Query Frame = 3
Query:  444 TPLSMAACSGCPKAVRALLRACPAINRQSGLFHRT--ALGSAAQMGHAEVVSELLKGGADPSITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASA-LGRGGC---VDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYD----ENEDEDRIVTAPENAPANRAWCRRGWLVVARA 1139
            TPL +A  +G    V+ALL A P  + +  +++R+   L  AAQ G A V+  +L+ G D +   DG   LH+AA   R+A +  LV +G             +   +     TP   A      E    L + G ++ A D  G T L +A+   GR G    VD LLR GADETA N D    AEVV              EY       +D +R+    ENAP +RAW RRG+LV+ RA
Sbjct:   73 TPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGA------------HVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI----------EYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 6.820e-13
Identity = 73/211 (34.60%), Postives = 93/211 (44.08%), Query Frame = 3
Query:  528 SGLFHRTALGSAAQMGHAEVVSELLKGGADPS---ITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGC---VDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARAR 1142
            S +F    +  A Q+GH  V+   L+ G D S       G   LH AA + +   V+ L+ +G D    +  G      YD     TP+  AA +   E L  LL  G D    D NG+  LHLA+     G    VD LLR GA ETA N     PAEV        P        D  E+    +     APA+RAW RRGW+V+ RAR
Sbjct:  163 SEVFPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSP---CYD-----TPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRP--------DATEERAGALVLLARAPADRAWRRRGWVVMLRAR 357          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 7.050e-11
Identity = 63/195 (32.31%), Postives = 90/195 (46.15%), Query Frame = 3
Query:  576 HAEVVSELLKGGADPSITDD-GLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVAR-WTPVQFAAAAGHREVLAFLLETGD-DLGATDSNGNTLLHLA----SALGRGGCVDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARA 1139
            +A + S L+  GAD +  D+ G + LH A  +GR  VV  L+  G D           Y    H  +  TP+  AA  G+   +  LL+ G  +  A D +G++ LH+            C D LLR GADETAT+ D   PA+++    G + +               +     NAPA+RAW RRG LV+ RA
Sbjct:  173 NAAMTSALVGMGADVTSVDNIGYSALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMASSEGHNGW---------------LQQLLANAPADRAWRRRGTLVMLRA 352          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.540e-10
Identity = 59/167 (35.33%), Postives = 78/167 (46.71%), Query Frame = 3
Query:  642 APLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARAR 1142
            +PLH A+  G+  V+  LV +G    T   +   +          TP+  AA  GH   +A LL +G  + A D    + LH A   G   CV ELLR GADET  + D   PA+V+   +         E  +  ED   I      APA+RAW RRGWLV+ R R
Sbjct:   38 SPLHAASRAGKPDVIACLVGAGAH--TEVRDRNND----------TPLLLAAWLGHATAIAKLLASGARVDA-DGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMS---------ESLERAEDIVLIREMLRRAPADRAWRRRGWLVMLRNR 182          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.070e-9
Identity = 82/260 (31.54%), Postives = 115/260 (44.23%), Query Frame = 3
Query:  630 DDGLAPLHLAASE-GRL---AVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAA---AGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARARQAASGTPKGKRARRQSRXXXXXXXXXXXXXXXRGVXXXXSGAQGVVMGTAGAGGVGDGLGDLIERVVGLRAEGAFRCVVGFL 1388
            D G   +H A +  G L   AVV+ L+ +G         G  N  +     RWTP+ FA     A     LA LLE G +  A   +  T LH+A        V+ LLR GADET +N++  +PA+V+  +   D  D+     D   D  RI      APA+R+W RRGWLV++R     S   + + A + SR                 +      A+  +  T   GG       L+  ++GL A+G FR VVGFL
Sbjct:  274 DQGYTAIHCAVNRHGPLDNGAVVRLLLEAG---------GGVNAETGRDFLRWTPLHFAVERRIASIDTTLA-LLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDE-----DVKADHKRIRRMLARAPADRSWRRRGWLVLSR-----SCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQM--TVDWGG-------LVGSLLGLEADGLFRLVVGFL 504          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 7.970e-8
Identity = 80/258 (31.01%), Postives = 113/258 (43.80%), Query Frame = 3
Query:  546 TALGSAAQMGHAEVVSELLKGGADP-SITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGW--KNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGD-DLGATDSNGNTLLHLASALGRG-GCVDELLRRGAD---------------ETATNNDDLM-------------------------PAEVVCDWTGKDP-----FDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARARQAASGTPKG 1169
            T++ +AA  G+ E+V  LL  GAD  S   +G  PL  A+ +G L VV+ L+ +  D VT A  G   ++Y   D+    T + FA A GH  V+  LL  G  ++ A D++G T LHLA  +GR    ++ LL  GAD               ETA ++ D +                         P    CD++  D         G +E   N+D D          A+RAW RRGWLV+ R R   +G   G
Sbjct:  122 TSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADAD-VTLAAHGLTDEDYCLGDNC---TALHFATAGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPLHHACDYSQSDAVLRLLLQAGADENALNDDGD--TPGVRELLADRAWRRRGWLVMLRLRTLKAGGDGG 373          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: UPI00201F54BC (uncharacterized protein LOC124148037 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F54BC)

HSP 1 Score: 66.2 bits (160), Expect = 9.490e-8
Identity = 51/137 (37.23%), Postives = 67/137 (48.91%), Query Frame = 3
Query:  525 QSGLFHRTALGSAAQMGHAEVVSELLKGGADPSITD-DGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELL 932
            Q G +  T +  AA  G   V   L   GAD S+ D DG + LHLA   G + +VQ L++     +   G+  +           TP+  AA  GH+ VL FL   G DL   D++GN+LLHLASA G    V  LL
Sbjct: 1356 QRGSYRLTPIMVAAVFGQKSVFDFLESEGADLSLVDTDGNSLLHLACQGGNMTIVQLLLSDL--NINQRGKRER-----------TPIMVAAFKGHKRVLEFLESKGADLSLVDTDGNSLLHLASAGGNMTIVKHLL 1479          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: A0A024TJI0_9STRA (TIR domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJI0_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.400e-7
Identity = 55/149 (36.91%), Postives = 69/149 (46.31%), Query Frame = 3
Query:  528 SGLFHRTALGSAAQMGHAEVVSELLKGGADPSITD-DGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGH---REVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATN 962
            +G++ RTAL  AA  G A  V  LL   A+P   D DG  PLH AA    L VVQ L+  G                       +PV + AA       +V++ L+E G +L  TD+ GNT LH+A           LLR GAD TATN
Sbjct:  645 TGIYKRTALHWAAISGSAACVLRLLAHKANPEAKDRDGRTPLHWAARNNHLEVVQVLLMQG------------QAXXXXXXXXXSPVLYFAAGAEGVSAKVVSALVEAGANLAYTDAQGNTPLHIALINENRTTAVSLLRNGADITATN 781          
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: A0A024TJW9_9STRA (TIR domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJW9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.510e-7
Identity = 55/149 (36.91%), Postives = 69/149 (46.31%), Query Frame = 3
Query:  528 SGLFHRTALGSAAQMGHAEVVSELLKGGADPSITD-DGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGH---REVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATN 962
            +G++ RTAL  AA  G A  V  LL   A+P   D DG  PLH AA    L VVQ L+  G                       +PV + AA       +V++ L+E G +L  TD+ GNT LH+A           LLR GAD TATN
Sbjct:  645 TGIYKRTALHWAAISGSAACVLRLLAHKANPEAKDRDGRTPLHWAARNNHLEVVQVLLMQG------------QAXXXXXXXXXSPVLYFAAGAEGVSAKVVSALVEAGANLAYTDAQGNTPLHIALINENRTTAVSLLRNGADITATN 781          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNU3_9PHAE2.500e-1334.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI2.940e-1334.30Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FSI6_ECTSI6.820e-1334.60Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LCR2_ECTSI7.050e-1132.31Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G0H9_ECTSI2.540e-1035.33Ankyrin repeat domain protein n=2 Tax=Ectocarpus T... [more]
D8LB27_ECTSI1.070e-931.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVI9_ECTSI7.970e-831.01Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
UPI00201F54BC9.490e-837.23uncharacterized protein LOC124148037 n=1 Tax=Halio... [more]
A0A024TJI0_9STRA1.400e-736.91TIR domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A024TJW9_9STRA1.510e-736.91TIR domain-containing protein n=2 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:1966117..1967507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score80.9
Seed ortholog evalue1.5e-12
Seed eggNOG ortholog2880.D8LQN0
KEGG koko:K21440
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons1
Model size1391
Cds size1203
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815402.6835322-UTR-S-ischiensis_contig1:1966116..19663041622815402.6835322-UTR-S-ischiensis_contig1:1966116..1966304Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 1966117..1966304 +
1695739683.4738207-UTR-S-ischiensis_contig1:1966116..19663041695739683.4738207-UTR-S-ischiensis_contig1:1966116..1966304Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 1966117..1966304 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815402.6958532-CDS-S-ischiensis_contig1:1966304..19675071622815402.6958532-CDS-S-ischiensis_contig1:1966304..1967507Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1966305..1967507 +
1695739683.4859965-CDS-S-ischiensis_contig1:1966304..19675071695739683.4859965-CDS-S-ischiensis_contig1:1966304..1967507Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1966305..1967507 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.315.1prot_S-ischiensis_contig1.315.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 1966305..1967507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.315.1

>prot_S-ischiensis_contig1.315.1 ID=prot_S-ischiensis_contig1.315.1|Name=mRNA_S-ischiensis_contig1.315.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=401bp
MLKNGAIADLSATDRRGYMPLHVAAGRGHADVVVALIKAGAERDARRADA
DNTPAHIACICGHDEVVTALLIAGPDREAWAGLRTTPLSMAACSGCPKAV
RALLRACPAINRQSGLFHRTALGSAAQMGHAEVVSELLKGGADPSITDDG
LAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQ
FAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRR
GADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENA
PANRAWCRRGWLVVARARQAASGTPKGKRARRQSRGGGSTGGGGGGRRRR
RGVGGGSSGAQGVVMGTAGAGGVGDGLGDLIERVVGLRAEGAFRCVVGFL
*
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mRNA from alignment at S-ischiensis_contig1:1966117..1967507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.315.1 ID=mRNA_S-ischiensis_contig1.315.1|Name=mRNA_S-ischiensis_contig1.315.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1391bp|location=Sequence derived from alignment at S-ischiensis_contig1:1966117..1967507+ (Schizocladia ischiensis KU_0333)
GGCGGCGGGTGTGATGCCGAAAAAACACTCCAAACGGTATACGCTGTCCG CCCCGGGCATGGGGGACGCTCTCCTGGCGCTCGTGTCGGGCGGGGCCCCG GTTGAGCAATGGGCGAGGTGGCTAAGCGCTCCCCTCGAGCACGCTGCGAG AGCGGGAGACACGGACATTGTGAAGAAGGAGGGGGAGGATGCTAAAAAAC GGAGCAATAGCGGACCTCTCAGCTACGGATAGGCGGGGGTACATGCCCCT GCACGTGGCCGCCGGGAGGGGGCACGCGGATGTCGTGGTGGCTCTCATCA AGGCGGGGGCAGAGCGGGATGCCCGGAGAGCAGATGCAGATAATACCCCG GCACACATTGCATGCATTTGCGGTCACGATGAGGTAGTGACTGCCCTTCT GATTGCAGGGCCCGACCGGGAGGCCTGGGCTGGTCTCAGAACCACCCCTC TCAGTATGGCAGCATGCAGCGGATGCCCCAAGGCGGTTCGTGCCCTGCTG AGGGCGTGCCCCGCCATCAACCGCCAGTCTGGTCTTTTTCACCGTACCGC CCTCGGGAGTGCGGCGCAGATGGGCCATGCGGAAGTGGTTTCCGAGCTAC TGAAAGGCGGGGCTGACCCCAGCATCACGGACGATGGTTTGGCCCCTCTC CACCTCGCAGCATCTGAAGGGCGTCTAGCCGTCGTGCAGAGGCTTGTGGC CTCCGGGGTTGACCGGGTGACCCCGGCTGGCGAGGGATGGAAAAACTACT ACTCGTACGACCACGTCGCCCGCTGGACGCCGGTTCAGTTCGCTGCAGCG GCTGGGCACAGGGAGGTGCTGGCGTTCCTGCTGGAGACCGGGGACGATCT GGGGGCCACTGACAGCAACGGAAACACCTTGCTGCACCTGGCGTCCGCGC TTGGGCGCGGCGGCTGCGTGGACGAGCTGCTCAGGCGGGGGGCGGACGAG ACGGCAACCAACAACGATGACCTCATGCCCGCAGAAGTCGTGTGCGATTG GACGGGCAAAGACCCTTTTGATGACGGAGAGGAGGAATACGACGAAAATG AAGACGAGGACCGTATTGTTACCGCTCCGGAGAACGCCCCAGCGAATCGG GCGTGGTGCCGTCGGGGCTGGCTGGTGGTGGCGCGGGCCCGCCAAGCCGC GTCCGGAACGCCCAAGGGAAAGCGGGCACGGCGGCAGTCGCGCGGGGGCG GTAGCACGGGTGGCGGCGGCGGCGGCCGCCGCCGCCGCCGTGGTGTTGGG GGGGGCTCGTCAGGCGCACAGGGAGTGGTCATGGGGACGGCTGGAGCGGG GGGGGTGGGGGATGGCCTTGGCGACCTCATTGAGCGCGTGGTCGGGCTGA GGGCGGAGGGGGCTTTCCGATGTGTGGTCGGCTTCCTGTAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig1:1966117..1967507+

>mRNA_S-ischiensis_contig1.315.1 ID=mRNA_S-ischiensis_contig1.315.1|Name=mRNA_S-ischiensis_contig1.315.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2406bp|location=Sequence derived from alignment at S-ischiensis_contig1:1966117..1967507+ (Schizocladia ischiensis KU_0333)
ATGCTAAAAAACGGAGCAATAGCGGACCTCTCAGCTACGGATAGGCGGGG
GTACATGCCCCTGCACGTGGCCGCCGGGAGGGGGCACGCGGATGTCGTGG
TGGCTCTCATCAAGGCGGGGGCAGAGCGGGATGCCCGGAGAGCAGATGCA
GATAATACCCCGGCACACATTGCATGCATTTGCGGTCACGATGAGGTAGT
GACTGCCCTTCTGATTGCAGGGCCCGACCGGGAGGCCTGGGCTGGTCTCA
GAACCACCCCTCTCAGTATGGCAGCATGCAGCGGATGCCCCAAGGCGGTT
CGTGCCCTGCTGAGGGCGTGCCCCGCCATCAACCGCCAGTCTGGTCTTTT
TCACCGTACCGCCCTCGGGAGTGCGGCGCAGATGGGCCATGCGGAAGTGG
TTTCCGAGCTACTGAAAGGCGGGGCTGACCCCAGCATCACGGACGATGGT
TTGGCCCCTCTCCACCTCGCAGCATCTGAAGGGCGTCTAGCCGTCGTGCA
GAGGCTTGTGGCCTCCGGGGTTGACCGGGTGACCCCGGCTGGCGAGGGAT
GGAAAAACTACTACTCGTACGACCACGTCGCCCGCTGGACGCCGGTTCAG
TTCGCTGCAGCGGCTGGGCACAGGGAGGTGCTGGCGTTCCTGCTGGAGAC
CGGGGACGATCTGGGGGCCACTGACAGCAACGGAAACACCTTGCTGCACC
TGGCGTCCGCGCTTGGGCGCGGCGGCTGCGTGGACGAGCTGCTCAGGCGG
GGGGCGGACGAGACGGCAACCAACAACGATGACCTCATGCCCGCAGAAGT
CGTGTGCGATTGGACGGGCAAAGACCCTTTTGATGACGGAGAGGAGGAAT
ACGACGAAAATGAAGACGAGGACCGTATTGTTACCGCTCCGGAGAACGCC
CCAGCGAATCGGGCGTGGTGCCGTCGGGGCTGGCTGGTGGTGGCGCGGGC
CCGCCAAGCCGCGTCCGGAACGCCCAAGGGAAAGCGGGCACGGCGGCAGT
CGCGCGGGGGCGGTAGCACGGGTGGCGGCGGCGGCGGCCGCCGCCGCCGC
CGTGGTGTTGGGGGGGGCTCGTCAGGCGCACAGGGAGTGGTCATGGGGAC
GGCTGGAGCGGGGGGGGTGGGGGATGGCCTTGGCGACCTCATTGAGCGCG
TGGTCGGGCTGAGGGCGGAGGGGGCTTTCCGATGTGTGGTCGGCTTCCTG
TAGATGCTAAAAAACGGAGCAATAGCGGACCTCTCAGCTACGGATAGGCG
GGGGTACATGCCCCTGCACGTGGCCGCCGGGAGGGGGCACGCGGATGTCG
TGGTGGCTCTCATCAAGGCGGGGGCAGAGCGGGATGCCCGGAGAGCAGAT
GCAGATAATACCCCGGCACACATTGCATGCATTTGCGGTCACGATGAGGT
AGTGACTGCCCTTCTGATTGCAGGGCCCGACCGGGAGGCCTGGGCTGGTC
TCAGAACCACCCCTCTCAGTATGGCAGCATGCAGCGGATGCCCCAAGGCG
GTTCGTGCCCTGCTGAGGGCGTGCCCCGCCATCAACCGCCAGTCTGGTCT
TTTTCACCGTACCGCCCTCGGGAGTGCGGCGCAGATGGGCCATGCGGAAG
TGGTTTCCGAGCTACTGAAAGGCGGGGCTGACCCCAGCATCACGGACGAT
GGTTTGGCCCCTCTCCACCTCGCAGCATCTGAAGGGCGTCTAGCCGTCGT
GCAGAGGCTTGTGGCCTCCGGGGTTGACCGGGTGACCCCGGCTGGCGAGG
GATGGAAAAACTACTACTCGTACGACCACGTCGCCCGCTGGACGCCGGTT
CAGTTCGCTGCAGCGGCTGGGCACAGGGAGGTGCTGGCGTTCCTGCTGGA
GACCGGGGACGATCTGGGGGCCACTGACAGCAACGGAAACACCTTGCTGC
ACCTGGCGTCCGCGCTTGGGCGCGGCGGCTGCGTGGACGAGCTGCTCAGG
CGGGGGGCGGACGAGACGGCAACCAACAACGATGACCTCATGCCCGCAGA
AGTCGTGTGCGATTGGACGGGCAAAGACCCTTTTGATGACGGAGAGGAGG
AATACGACGAAAATGAAGACGAGGACCGTATTGTTACCGCTCCGGAGAAC
GCCCCAGCGAATCGGGCGTGGTGCCGTCGGGGCTGGCTGGTGGTGGCGCG
GGCCCGCCAAGCCGCGTCCGGAACGCCCAAGGGAAAGCGGGCACGGCGGC
AGTCGCGCGGGGGCGGTAGCACGGGTGGCGGCGGCGGCGGCCGCCGCCGC
CGCCGTGGTGTTGGGGGGGGCTCGTCAGGCGCACAGGGAGTGGTCATGGG
GACGGCTGGAGCGGGGGGGGTGGGGGATGGCCTTGGCGACCTCATTGAGC
GCGTGGTCGGGCTGAGGGCGGAGGGGGCTTTCCGATGTGTGGTCGGCTTC
CTGTAG
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