mRNA_S-ischiensis_contig1.315.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 2.500e-13 Identity = 84/242 (34.71%), Postives = 113/242 (46.69%), Query Frame = 3
Query: 444 TPLSMAACSGCPKAVRALLRACPAINRQSGLFHRT--ALGSAAQMGHAEVVSELLKGGADPSITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASA-LGRGGC---VDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYD----ENEDEDRIVTAPENAPANRAWCRRGWLVVARA 1139
TPL +A +G V+ALL A P + +++R+ L AAQ G A V+ +L+ G D + DG LH+AA R+A + LV +G + + TP A + E L + G ++ A D G T L +A+ GR G VD LLR GADETA N D AEVV EY +D +R+ ENAPA+RAW RRG LV+ RA
Sbjct: 122 TPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGA------------HVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI----------EYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 2.940e-13 Identity = 83/242 (34.30%), Postives = 113/242 (46.69%), Query Frame = 3
Query: 444 TPLSMAACSGCPKAVRALLRACPAINRQSGLFHRT--ALGSAAQMGHAEVVSELLKGGADPSITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASA-LGRGGC---VDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYD----ENEDEDRIVTAPENAPANRAWCRRGWLVVARA 1139
TPL +A +G V+ALL A P + + +++R+ L AAQ G A V+ +L+ G D + DG LH+AA R+A + LV +G + + TP A E L + G ++ A D G T L +A+ GR G VD LLR GADETA N D AEVV EY +D +R+ ENAP +RAW RRG+LV+ RA
Sbjct: 73 TPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGA------------HVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI----------EYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 6.820e-13 Identity = 73/211 (34.60%), Postives = 93/211 (44.08%), Query Frame = 3
Query: 528 SGLFHRTALGSAAQMGHAEVVSELLKGGADPS---ITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGC---VDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARAR 1142
S +F + A Q+GH V+ L+ G D S G LH AA + + V+ L+ +G D + G YD TP+ AA + E L LL G D D NG+ LHLA+ G VD LLR GA ETA N PAEV P D E+ + APA+RAW RRGW+V+ RAR
Sbjct: 163 SEVFPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSP---CYD-----TPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRP--------DATEERAGALVLLARAPADRAWRRRGWVVMLRAR 357
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 7.050e-11 Identity = 63/195 (32.31%), Postives = 90/195 (46.15%), Query Frame = 3
Query: 576 HAEVVSELLKGGADPSITDD-GLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVAR-WTPVQFAAAAGHREVLAFLLETGD-DLGATDSNGNTLLHLA----SALGRGGCVDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARA 1139
+A + S L+ GAD + D+ G + LH A +GR VV L+ G D Y H + TP+ AA G+ + LL+ G + A D +G++ LH+ C D LLR GADETAT+ D PA+++ G + + + NAPA+RAW RRG LV+ RA
Sbjct: 173 NAAMTSALVGMGADVTSVDNIGYSALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMASSEGHNGW---------------LQQLLANAPADRAWRRRGTLVMLRA 352
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 2.540e-10 Identity = 59/167 (35.33%), Postives = 78/167 (46.71%), Query Frame = 3
Query: 642 APLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARAR 1142
+PLH A+ G+ V+ LV +G T + + TP+ AA GH +A LL +G + A D + LH A G CV ELLR GADET + D PA+V+ + E + ED I APA+RAW RRGWLV+ R R
Sbjct: 38 SPLHAASRAGKPDVIACLVGAGAH--TEVRDRNND----------TPLLLAAWLGHATAIAKLLASGARVDA-DGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMS---------ESLERAEDIVLIREMLRRAPADRAWRRRGWLVMLRNR 182
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 1.070e-9 Identity = 82/260 (31.54%), Postives = 115/260 (44.23%), Query Frame = 3
Query: 630 DDGLAPLHLAASE-GRL---AVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAA---AGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATNNDDLMPAEVVCDWTGKDPFDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARARQAASGTPKGKRARRQSRXXXXXXXXXXXXXXXRGVXXXXSGAQGVVMGTAGAGGVGDGLGDLIERVVGLRAEGAFRCVVGFL 1388
D G +H A + G L AVV+ L+ +G G N + RWTP+ FA A LA LLE G + A + T LH+A V+ LLR GADET +N++ +PA+V+ + D D+ D D RI APA+R+W RRGWLV++R S + + A + SR + A+ + T GG L+ ++GL A+G FR VVGFL
Sbjct: 274 DQGYTAIHCAVNRHGPLDNGAVVRLLLEAG---------GGVNAETGRDFLRWTPLHFAVERRIASIDTTLA-LLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDE-----DVKADHKRIRRMLARAPADRSWRRRGWLVLSR-----SCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQM--TVDWGG-------LVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 7.970e-8 Identity = 80/258 (31.01%), Postives = 113/258 (43.80%), Query Frame = 3
Query: 546 TALGSAAQMGHAEVVSELLKGGADP-SITDDGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGW--KNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGD-DLGATDSNGNTLLHLASALGRG-GCVDELLRRGAD---------------ETATNNDDLM-------------------------PAEVVCDWTGKDP-----FDDGEEEYDENEDEDRIVTAPENAPANRAWCRRGWLVVARARQAASGTPKG 1169
T++ +AA G+ E+V LL GAD S +G PL A+ +G L VV+ L+ + D VT A G ++Y D+ T + FA A GH V+ LL G ++ A D++G T LHLA +GR ++ LL GAD ETA ++ D + P CD++ D G +E N+D D A+RAW RRGWLV+ R R +G G
Sbjct: 122 TSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADAD-VTLAAHGLTDEDYCLGDNC---TALHFATAGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPLHHACDYSQSDAVLRLLLQAGADENALNDDGD--TPGVRELLADRAWRRRGWLVMLRLRTLKAGGDGG 373
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: UPI00201F54BC (uncharacterized protein LOC124148037 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F54BC) HSP 1 Score: 66.2 bits (160), Expect = 9.490e-8 Identity = 51/137 (37.23%), Postives = 67/137 (48.91%), Query Frame = 3
Query: 525 QSGLFHRTALGSAAQMGHAEVVSELLKGGADPSITD-DGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGHREVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELL 932
Q G + T + AA G V L GAD S+ D DG + LHLA G + +VQ L++ + G+ + TP+ AA GH+ VL FL G DL D++GN+LLHLASA G V LL
Sbjct: 1356 QRGSYRLTPIMVAAVFGQKSVFDFLESEGADLSLVDTDGNSLLHLACQGGNMTIVQLLLSDL--NINQRGKRER-----------TPIMVAAFKGHKRVLEFLESKGADLSLVDTDGNSLLHLASAGGNMTIVKHLL 1479
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: A0A024TJI0_9STRA (TIR domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJI0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.400e-7 Identity = 55/149 (36.91%), Postives = 69/149 (46.31%), Query Frame = 3
Query: 528 SGLFHRTALGSAAQMGHAEVVSELLKGGADPSITD-DGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGH---REVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATN 962
+G++ RTAL AA G A V LL A+P D DG PLH AA L VVQ L+ G +PV + AA +V++ L+E G +L TD+ GNT LH+A LLR GAD TATN
Sbjct: 645 TGIYKRTALHWAAISGSAACVLRLLAHKANPEAKDRDGRTPLHWAARNNHLEVVQVLLMQG------------QAXXXXXXXXXSPVLYFAAGAEGVSAKVVSALVEAGANLAYTDAQGNTPLHIALINENRTTAVSLLRNGADITATN 781
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Match: A0A024TJW9_9STRA (TIR domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJW9_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.510e-7 Identity = 55/149 (36.91%), Postives = 69/149 (46.31%), Query Frame = 3
Query: 528 SGLFHRTALGSAAQMGHAEVVSELLKGGADPSITD-DGLAPLHLAASEGRLAVVQRLVASGVDRVTPAGEGWKNYYSYDHVARWTPVQFAAAAGH---REVLAFLLETGDDLGATDSNGNTLLHLASALGRGGCVDELLRRGADETATN 962
+G++ RTAL AA G A V LL A+P D DG PLH AA L VVQ L+ G +PV + AA +V++ L+E G +L TD+ GNT LH+A LLR GAD TATN
Sbjct: 645 TGIYKRTALHWAAISGSAACVLRLLAHKANPEAKDRDGRTPLHWAARNNHLEVVQVLLMQG------------QAXXXXXXXXXSPVLYFAAGAEGVSAKVVSALVEAGANLAYTDAQGNTPLHIALINENRTTAVSLLRNGADITATN 781 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.315.1 >prot_S-ischiensis_contig1.315.1 ID=prot_S-ischiensis_contig1.315.1|Name=mRNA_S-ischiensis_contig1.315.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=401bp MLKNGAIADLSATDRRGYMPLHVAAGRGHADVVVALIKAGAERDARRADAback to top mRNA from alignment at S-ischiensis_contig1:1966117..1967507+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.315.1 ID=mRNA_S-ischiensis_contig1.315.1|Name=mRNA_S-ischiensis_contig1.315.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1391bp|location=Sequence derived from alignment at S-ischiensis_contig1:1966117..1967507+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:1966117..1967507+ >mRNA_S-ischiensis_contig1.315.1 ID=mRNA_S-ischiensis_contig1.315.1|Name=mRNA_S-ischiensis_contig1.315.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2406bp|location=Sequence derived from alignment at S-ischiensis_contig1:1966117..1967507+ (Schizocladia ischiensis KU_0333)back to top |