mRNA_S-ischiensis_contig1.159.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A6H5L8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q7_9PHAE) HSP 1 Score: 225 bits (574), Expect = 8.170e-67 Identity = 136/303 (44.88%), Postives = 168/303 (55.45%), Query Frame = 1
Query: 133 EKRGDEDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRND 1041
E G + + ++ IS+ DYF R+ EFKVWL ++T FEDLTS ESH+ F KFVK WN GKLD +Y+G++PD L A+ +KT+H WGFVNRLS +DQ +LE +DSVH STEKV+G +SN+PV G A P G G RE+ +VL+E+APKETGR A LD+RR VGARTHA+A+ERE DGLDMKESDTMGG + GL KRAAFMAQMG+KAG I I+PR D
Sbjct: 94 EGSGKQSIQAEIQISEKDYFIRAMEFKVWLCHKKETLFEDLTSDESHELFDKFVKDWNRGKLDPHFYEGRLPDELIARTKKTQHRWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPIGSAATAPGLVVKKQAD---------------GRGGDXXXXXXXXXXXXXXXXXXXXXXXXXREKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRRD 380
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: D8LTC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC9_ECTSI) HSP 1 Score: 219 bits (558), Expect = 1.330e-65 Identity = 134/291 (46.05%), Postives = 164/291 (56.36%), Query Frame = 1
Query: 172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRA-GHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRND 1041
IS+ DYF R+ EFKVWL +K FEDLTS ESH+ F KF+K WN GKLD +Y+G++PD L A+ +KT+H WGFVNRLS +DQ +LE +DSVH STEKV+G +SN+PV G A P +G +A G G E+ +VL+E+APKETGR A LD+RR VGARTHA+A+ERE DGLDMKESDTMGG + GL KRAAFMAQMG+KAG I I+PR D
Sbjct: 14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPVGSAATAPGVV----------------VGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQALLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKHRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRRD 287
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A836CIB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB7_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.470e-40 Identity = 105/273 (38.46%), Postives = 142/273 (52.01%), Query Frame = 1
Query: 43 SSSDDRHSKKKKHHKDKKXXXXXXXXXXXXEKRGDEDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGG 861
S S++R SKK+KH K E E V +++ DYF R EF VWLL R+ FE+L+SK++HK F+KF K WN+GKL+ YY G IP+ A A+KT+H+WGFV R++ +D++ L+A +S+ T I A GG A + PR G +G G RG ++ A L+E+APKETGR AA+D+RR VGA H +ARERE +DGLD+ E DTMGG
Sbjct: 32 SDSEERSSKKRKHSK---------------ETEAREATVPSVKLTEDDYFVRVDEFSVWLLDHRRKRFEELSSKDAHKQFAKFCKEWNAGKLEPTYYSGAIPEDKVAAAKKTQHSWGFVKRMTDRDKSTLKAATNSIKTDTA--------ITKASAGGSTA--------CAASHATNMVRPSVAPRGGGEGDTGGSRGHGRGGGLKAVHAAA------------LDEIAPKETGRQAAIDKRRTVGAAMHGAAREREFQRDGLDLPEQDTMGG 261
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A067BZG8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZG8_SAPPC) HSP 1 Score: 133 bits (334), Expect = 1.800e-32 Identity = 107/302 (35.43%), Postives = 149/302 (49.34%), Query Frame = 1
Query: 133 EKRGDEDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRN 1038
EKRGD + IS DYF ++ EF+VWL T +K FEDLTS ++ ++F KF + WN GKLDAMYY IP H+ +T+H WGF+ L+ ++ L +T D+V ++T K G SS+ A P + P XXXXXXXXXXX X D E +R + E +V+EE+APK TGR A ++++RE A H +AR +E +DGLD+ + MGG V+ + + F+ MGI+ G I I PR
Sbjct: 29 EKRGDHE-----RISRDDYFEKAREFRVWLKTEKKRYFEDLTSDDAMQYFDKFARRWNDGKLDAMYY-ASIPQHILESVNRTKHKWGFLKNLNESERLHLASTKDTVDITTNK-SGASSS--TARPSKATSPPRSSKQQXXXXXXXXXXXXX------------------DKYERKRYHKHKE---------LVMEELAPKATGRDATVEKKREKAATLHGAARAKEDAKDGLDLSDDFLMGGSDDFHARIQRRKAAQDKRQDEKQQRVTAAQEAEAARMQKFLQDMGIQPGQDRITIAPRQ 294
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A3F2RY91_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY91_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.860e-30 Identity = 84/231 (36.36%), Postives = 130/231 (56.28%), Query Frame = 1
Query: 172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFF-SKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGG 861
IS+ DYF R+TEF+VWL ++ +DL+++E+ + F FV+ WN GKL M+Y+G +PD + Q ++TRH WGFV +L +++ L DSV V+T+K ++S G G P R R G + ++ +E K+R E K+ +E R+ V++E+APKETGR A + +RR++G + H +AR+RE +DGLD+ E MGG
Sbjct: 67 ISEDDYFLRATEFRVWLTQSKGKYVDDLSTEEATQLFRGDFVRKWNRGKLAEMFYKG-LPDAVLEQTKRTRHRWGFVAKLGEKEKFALATAKDSVDVATKKKDLLNS-----GNGASVKDPPREKTETD---------RSNSRRKGRE---------EEDKEETWKRRKVERKKEKEYRDTVMDELAPKETGREAQIQKRRQLGEKLHGAARDREDTRDGLDVSEDFLMGG 273
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A1V9Z5L8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5L8_9STRA) HSP 1 Score: 126 bits (317), Expect = 5.470e-30 Identity = 99/292 (33.90%), Postives = 139/292 (47.60%), Query Frame = 1
Query: 172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSS---NIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRN 1038
IS DYF ++ EF+VWL T + FEDLTS+++ K F KFV+ WN GKLD MYY G IP H+ ++T+H WGFV L+ ++ L +T D+V ++T K N P + XXXXXXXXXXXX X K+ + ++ V+EE+APK TGR A ++++RE A H +AR++E +DGLD+ E MGG V+ + + F+ MGI+ G I I PR
Sbjct: 38 ISRDDYFEKAREFRVWLKTDKNVYFEDLTSEDAMKHFDKFVRRWNDGKLDRMYYTG-IPQHVLESVQRTKHKWGFVKNLNDSERLHLASTKDTVDITTNKSTSSKESYRNEPAQSKPSSSRSRQINDDXXXXXXXXXXXXXXXX------------------------------KKYHKHKDSVMEELAPKATGREATIEKKREKAATLHGAARQKEDSKDGLDLSEDFLMGGTDDFHARVQRRKAAIDRRQDEKQQRVAAAQDAESARMQKFLQDMGIQPGQERITIAPRQ 298
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A5D6Y8C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C8_9STRA) HSP 1 Score: 126 bits (317), Expect = 8.030e-30 Identity = 100/292 (34.25%), Postives = 141/292 (48.29%), Query Frame = 1
Query: 172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFS-KFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXX-VSGLRXXXXXKRAAFMAQMGIKAGMG-PIKIRPRN 1038
IS+ D+F R+TEF+VWL T+ EDLT++E+ F KFVK WN G+L M+Y+G IP+H+ Q R+T+H WGF RLS ++ +L + DSV V+T K +++ A P XXXX X A+ K+ R+ R VLEE+APKETGR AAL++RR+V + H +AR+RE +DGLD+ ++ MGG + + + F+ MGI A G PI I PR
Sbjct: 29 ISEDDFFLRATEFRVWLAQTKNKYVEDLTTQEASALFQRKFVKKWNRGRLARMFYEG-IPEHVLEQTRRTKHTWGFAARLSDKEAMQLASARDSVGVATRKTDLLATPRAPAAP----EPEPLERSSRTHHDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADRKRHRQHRESVLEELAPKETGREAALEKRRQVAGKLHGAARDREENRDGLDVSDAFLMGGSGSDLQHRLQAREQARDRRQQEQQDKLDEFKAKEAARMDKFLQDMGISATAGKPITIAPRK 315
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A485KJU9_9STRA (Aste57867_8246 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJU9_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.780e-29 Identity = 90/300 (30.00%), Postives = 138/300 (46.00%), Query Frame = 1
Query: 148 EDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDS---REVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRN 1038
+D DV IS+ DYF ++ EF+VWL ++ F+DLTS ++ +F KFV WN GKLD+MYY +IP H+ ++T+H WG +++ ++ L +T D+V +ST K +N P P + D DS RK+ + K + + MVLEE+APK TGR A ++++R+V A H +AR+ E +DGL + ++ MGG V+ + + F+A MGI+ G I I PR
Sbjct: 40 DDSRPDVQISEDDYFEKALEFRVWLKLEKRLYFDDLTSADAQGYFGKFVHKWNGGKLDSMYYT-KIPQHILEGIQRTKHKWGL--KMNETERLELASTKDTVDISTNK----GTNHPP---------PYKSHPQTSKATSASFASKKR---------------DDDSDXXXXXERKRAKRDKKTYVKHKEMVLEELAPKATGREATIEKKRQVAASVHGAARQNEDAKDGLTLSDAFLMGGSDDFQARVQRRKHAQDRRVEEQQQRVTAAQEAEAARMQKFLADMGIQPGQERITIAPRK 308
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: K3W6H9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6H9_GLOUD) HSP 1 Score: 122 bits (306), Expect = 4.980e-28 Identity = 98/324 (30.25%), Postives = 141/324 (43.52%), Query Frame = 1
Query: 169 PISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFF-SKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPR-AGHQGPMGPGRGDQDSREVRRK-QRIAENKQGRER---------------------------RNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAA----FMAQMGIKAGMGPIKIRPRN 1038
PISD DYF R+TEF+VWL T+ EDL++ E+ + F +KFVK WN G+L +MYY+G IP+H+ Q R+T+H WGF LS ++ L DSV V+T K + S R +G GH+ D D ++ +R +R + + R VL+E+ PKETGR A L++RR+V ++ H +AR+R+ +DGLD+ + MGG + R K +A F+ MGI A P I PR
Sbjct: 50 PISDDDYFLRATEFRVWLAKTKDKYVEDLSTAEAMELFQAKFVKKWNRGRLASMYYEG-IPEHVLEQTRRTKHKWGFTKTLSEKEMFDLATAKDSVGVATRKEDLLQST-----------------------------RRHVGTSDGGHRSHKRAANSDDDDQDRQRHGERCSRSPTRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXHESVLDELVPKETGREAMLEKRRQVASKMHGAARDRDENRDGLDLSDDFLMGGGVRAETDLQRRLKQREAARDRKQQEQNEKRAELEAKESARMDKFLHDMGISANSKPFTIAPRR 343
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: H3H526_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H526_PHYRM) HSP 1 Score: 121 bits (303), Expect = 6.860e-28 Identity = 80/234 (34.19%), Postives = 129/234 (55.13%), Query Frame = 1
Query: 172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFS-KFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIP---VAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGG 861
IS+ DYF R TEF+VWL T+ +DL++ E+ + F+ +F K WN GKL M+Y+G +PD + Q ++TRH WGFV +L +++ L DSV V+T++ +SS V GP + R + ++D E R++++ + K+ RE R+ V++E+APK TGR A +++RR++ + H +AR+R+ +DGLD+ E MGG
Sbjct: 56 ISEEDYFLRQTEFRVWLAQTKGKYVDDLSTDEATELFTDQFAKKWNRGKLSTMFYEG-LPDAVVEQTKRTRHRWGFVAKLGEKEKFELATAKDSVDVATKRENLLSSGSKRESVKGP------------------------QLEEDRDSSKSKRRAKELEEDKEEQWRRRKL-DQKREREYRDTVMDELAPKATGREAQIEKRRQLSQKLHGAARDRDDARDGLDVSEDFLMGG 263 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.159.1 >prot_S-ischiensis_contig1.159.1 ID=prot_S-ischiensis_contig1.159.1|Name=mRNA_S-ischiensis_contig1.159.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=345bp MAKRSREDWSSSDDRHSKKKKHHKDKKKDKKKDKKKDKHEKRGDEDVAVDback to top mRNA from alignment at S-ischiensis_contig1:997342..999826+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.159.1 ID=mRNA_S-ischiensis_contig1.159.1|Name=mRNA_S-ischiensis_contig1.159.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2485bp|location=Sequence derived from alignment at S-ischiensis_contig1:997342..999826+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:997342..999826+ >mRNA_S-ischiensis_contig1.159.1 ID=mRNA_S-ischiensis_contig1.159.1|Name=mRNA_S-ischiensis_contig1.159.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2070bp|location=Sequence derived from alignment at S-ischiensis_contig1:997342..999826+ (Schizocladia ischiensis KU_0333)back to top |