mRNA_S-ischiensis_contig1.159.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.159.1
Unique NamemRNA_S-ischiensis_contig1.159.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A6H5L8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q7_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 8.170e-67
Identity = 136/303 (44.88%), Postives = 168/303 (55.45%), Query Frame = 1
Query:  133 EKRGDEDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRND 1041
            E  G + +  ++ IS+ DYF R+ EFKVWL   ++T FEDLTS ESH+ F KFVK WN GKLD  +Y+G++PD L A+ +KT+H WGFVNRLS +DQ +LE  +DSVH STEKV+G +SN+PV   G  A  P                        G  G                          RE+  +VL+E+APKETGR A LD+RR VGARTHA+A+ERE   DGLDMKESDTMGG                         + GL      KRAAFMAQMG+KAG   I I+PR D
Sbjct:   94 EGSGKQSIQAEIQISEKDYFIRAMEFKVWLCHKKETLFEDLTSDESHELFDKFVKDWNRGKLDPHFYEGRLPDELIARTKKTQHRWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPIGSAATAPGLVVKKQAD---------------GRGGDXXXXXXXXXXXXXXXXXXXXXXXXXREKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRRD 380          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: D8LTC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC9_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 1.330e-65
Identity = 134/291 (46.05%), Postives = 164/291 (56.36%), Query Frame = 1
Query:  172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRA-GHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRND 1041
            IS+ DYF R+ EFKVWL   +K  FEDLTS ESH+ F KF+K WN GKLD  +Y+G++PD L A+ +KT+H WGFVNRLS +DQ +LE  +DSVH STEKV+G +SN+PV   G  A  P                   +G +A G  G                           E+  +VL+E+APKETGR A LD+RR VGARTHA+A+ERE   DGLDMKESDTMGG                         + GL      KRAAFMAQMG+KAG   I I+PR D
Sbjct:   14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPVGSAATAPGVV----------------VGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQALLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKHRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRRD 287          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A836CIB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.470e-40
Identity = 105/273 (38.46%), Postives = 142/273 (52.01%), Query Frame = 1
Query:   43 SSSDDRHSKKKKHHKDKKXXXXXXXXXXXXEKRGDEDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGG 861
            S S++R SKK+KH K               E    E     V +++ DYF R  EF VWLL  R+  FE+L+SK++HK F+KF K WN+GKL+  YY G IP+   A A+KT+H+WGFV R++ +D++ L+A  +S+   T         I  A  GG  A                     + PR G +G  G  RG      ++     A            L+E+APKETGR AA+D+RR VGA  H +ARERE  +DGLD+ E DTMGG
Sbjct:   32 SDSEERSSKKRKHSK---------------ETEAREATVPSVKLTEDDYFVRVDEFSVWLLDHRRKRFEELSSKDAHKQFAKFCKEWNAGKLEPTYYSGAIPEDKVAAAKKTQHSWGFVKRMTDRDKSTLKAATNSIKTDTA--------ITKASAGGSTA--------CAASHATNMVRPSVAPRGGGEGDTGGSRGHGRGGGLKAVHAAA------------LDEIAPKETGRQAAIDKRRTVGAAMHGAAREREFQRDGLDLPEQDTMGG 261          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A067BZG8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZG8_SAPPC)

HSP 1 Score: 133 bits (334), Expect = 1.800e-32
Identity = 107/302 (35.43%), Postives = 149/302 (49.34%), Query Frame = 1
Query:  133 EKRGDEDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRN 1038
            EKRGD +      IS  DYF ++ EF+VWL T +K  FEDLTS ++ ++F KF + WN GKLDAMYY   IP H+     +T+H WGF+  L+  ++  L +T D+V ++T K  G SS+   A P    + P      XXXXXXXXXXX X                  D  E +R  +  E         +V+EE+APK TGR A ++++RE  A  H +AR +E  +DGLD+ +   MGG                         V+  +     +   F+  MGI+ G   I I PR 
Sbjct:   29 EKRGDHE-----RISRDDYFEKAREFRVWLKTEKKRYFEDLTSDDAMQYFDKFARRWNDGKLDAMYY-ASIPQHILESVNRTKHKWGFLKNLNESERLHLASTKDTVDITTNK-SGASSS--TARPSKATSPPRSSKQQXXXXXXXXXXXXX------------------DKYERKRYHKHKE---------LVMEELAPKATGRDATVEKKREKAATLHGAARAKEDAKDGLDLSDDFLMGGSDDFHARIQRRKAAQDKRQDEKQQRVTAAQEAEAARMQKFLQDMGIQPGQDRITIAPRQ 294          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A3F2RY91_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY91_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.860e-30
Identity = 84/231 (36.36%), Postives = 130/231 (56.28%), Query Frame = 1
Query:  172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFF-SKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGG 861
            IS+ DYF R+TEF+VWL  ++    +DL+++E+ + F   FV+ WN GKL  M+Y+G +PD +  Q ++TRH WGFV +L  +++  L    DSV V+T+K   ++S     G G     P                 R    R G +         ++ +E   K+R  E K+ +E R+ V++E+APKETGR A + +RR++G + H +AR+RE  +DGLD+ E   MGG
Sbjct:   67 ISEDDYFLRATEFRVWLTQSKGKYVDDLSTEEATQLFRGDFVRKWNRGKLAEMFYKG-LPDAVLEQTKRTRHRWGFVAKLGEKEKFALATAKDSVDVATKKKDLLNS-----GNGASVKDPPREKTETD---------RSNSRRKGRE---------EEDKEETWKRRKVERKKEKEYRDTVMDELAPKETGREAQIQKRRQLGEKLHGAARDREDTRDGLDVSEDFLMGG 273          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A1V9Z5L8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5L8_9STRA)

HSP 1 Score: 126 bits (317), Expect = 5.470e-30
Identity = 99/292 (33.90%), Postives = 139/292 (47.60%), Query Frame = 1
Query:  172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSS---NIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRN 1038
            IS  DYF ++ EF+VWL T +   FEDLTS+++ K F KFV+ WN GKLD MYY G IP H+    ++T+H WGFV  L+  ++  L +T D+V ++T K         N P       +        XXXXXXXXXXXX X                                K+  + ++ V+EE+APK TGR A ++++RE  A  H +AR++E  +DGLD+ E   MGG                         V+  +     +   F+  MGI+ G   I I PR 
Sbjct:   38 ISRDDYFEKAREFRVWLKTDKNVYFEDLTSEDAMKHFDKFVRRWNDGKLDRMYYTG-IPQHVLESVQRTKHKWGFVKNLNDSERLHLASTKDTVDITTNKSTSSKESYRNEPAQSKPSSSRSRQINDDXXXXXXXXXXXXXXXX------------------------------KKYHKHKDSVMEELAPKATGREATIEKKREKAATLHGAARQKEDSKDGLDLSEDFLMGGTDDFHARVQRRKAAIDRRQDEKQQRVAAAQDAESARMQKFLQDMGIQPGQERITIAPRQ 298          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A5D6Y8C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C8_9STRA)

HSP 1 Score: 126 bits (317), Expect = 8.030e-30
Identity = 100/292 (34.25%), Postives = 141/292 (48.29%), Query Frame = 1
Query:  172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFS-KFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXX-VSGLRXXXXXKRAAFMAQMGIKAGMG-PIKIRPRN 1038
            IS+ D+F R+TEF+VWL  T+    EDLT++E+   F  KFVK WN G+L  M+Y+G IP+H+  Q R+T+H WGF  RLS ++  +L +  DSV V+T K   +++    A P                    XXXX X                             A+ K+ R+ R  VLEE+APKETGR AAL++RR+V  + H +AR+RE  +DGLD+ ++  MGG                          +   +     +   F+  MGI A  G PI I PR 
Sbjct:   29 ISEDDFFLRATEFRVWLAQTKNKYVEDLTTQEASALFQRKFVKKWNRGRLARMFYEG-IPEHVLEQTRRTKHTWGFAARLSDKEAMQLASARDSVGVATRKTDLLATPRAPAAP----EPEPLERSSRTHHDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADRKRHRQHRESVLEELAPKETGREAALEKRRQVAGKLHGAARDREENRDGLDVSDAFLMGGSGSDLQHRLQAREQARDRRQQEQQDKLDEFKAKEAARMDKFLQDMGISATAGKPITIAPRK 315          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: A0A485KJU9_9STRA (Aste57867_8246 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJU9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 6.780e-29
Identity = 90/300 (30.00%), Postives = 138/300 (46.00%), Query Frame = 1
Query:  148 EDVAVDVPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDS---REVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAAFMAQMGIKAGMGPIKIRPRN 1038
            +D   DV IS+ DYF ++ EF+VWL   ++  F+DLTS ++  +F KFV  WN GKLD+MYY  +IP H+    ++T+H WG   +++  ++  L +T D+V +ST K     +N P          P                 +                 D DS       RK+   + K   + + MVLEE+APK TGR A ++++R+V A  H +AR+ E  +DGL + ++  MGG                         V+  +     +   F+A MGI+ G   I I PR 
Sbjct:   40 DDSRPDVQISEDDYFEKALEFRVWLKLEKRLYFDDLTSADAQGYFGKFVHKWNGGKLDSMYYT-KIPQHILEGIQRTKHKWGL--KMNETERLELASTKDTVDISTNK----GTNHPP---------PYKSHPQTSKATSASFASKKR---------------DDDSDXXXXXERKRAKRDKKTYVKHKEMVLEELAPKATGREATIEKKRQVAASVHGAARQNEDAKDGLTLSDAFLMGGSDDFQARVQRRKHAQDRRVEEQQQRVTAAQEAEAARMQKFLADMGIQPGQERITIAPRK 308          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: K3W6H9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6H9_GLOUD)

HSP 1 Score: 122 bits (306), Expect = 4.980e-28
Identity = 98/324 (30.25%), Postives = 141/324 (43.52%), Query Frame = 1
Query:  169 PISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFF-SKFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIPVAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPR-AGHQGPMGPGRGDQDSREVRRK-QRIAENKQGRER---------------------------RNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGGXXXXXXXXXXXXXXXXXXXXXXXXXVSGLRXXXXXKRAA----FMAQMGIKAGMGPIKIRPRN 1038
            PISD DYF R+TEF+VWL  T+    EDL++ E+ + F +KFVK WN G+L +MYY+G IP+H+  Q R+T+H WGF   LS ++   L    DSV V+T K   + S                               R +G    GH+        D D ++ +R  +R + +   R                                VL+E+ PKETGR A L++RR+V ++ H +AR+R+  +DGLD+ +   MGG                          +  R     K +A    F+  MGI A   P  I PR 
Sbjct:   50 PISDDDYFLRATEFRVWLAKTKDKYVEDLSTAEAMELFQAKFVKKWNRGRLASMYYEG-IPEHVLEQTRRTKHKWGFTKTLSEKEMFDLATAKDSVGVATRKEDLLQST-----------------------------RRHVGTSDGGHRSHKRAANSDDDDQDRQRHGERCSRSPTRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXHESVLDELVPKETGREAMLEKRRQVASKMHGAARDRDENRDGLDLSDDFLMGGGVRAETDLQRRLKQREAARDRKQQEQNEKRAELEAKESARMDKFLHDMGISANSKPFTIAPRR 343          
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Match: H3H526_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H526_PHYRM)

HSP 1 Score: 121 bits (303), Expect = 6.860e-28
Identity = 80/234 (34.19%), Postives = 129/234 (55.13%), Query Frame = 1
Query:  172 ISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFS-KFVKAWNSGKLDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVSTEKVRGVSSNIP---VAGPGGLAAGPXXXXXXXXXXXXXXXXXRXMGPRAGHQGPMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDRRREVGARTHASARERESMQDGLDMKESDTMGG 861
            IS+ DYF R TEF+VWL  T+    +DL++ E+ + F+ +F K WN GKL  M+Y+G +PD +  Q ++TRH WGFV +L  +++  L    DSV V+T++   +SS      V GP                        +    R   +        ++D  E  R++++ + K+ RE R+ V++E+APK TGR A +++RR++  + H +AR+R+  +DGLD+ E   MGG
Sbjct:   56 ISEEDYFLRQTEFRVWLAQTKGKYVDDLSTDEATELFTDQFAKKWNRGKLSTMFYEG-LPDAVVEQTKRTRHRWGFVAKLGEKEKFELATAKDSVDVATKRENLLSSGSKRESVKGP------------------------QLEEDRDSSKSKRRAKELEEDKEEQWRRRKL-DQKREREYRDTVMDELAPKATGREAQIEKRRQLSQKLHGAARDRDDARDGLDVSEDFLMGG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Q7_9PHAE8.170e-6744.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTC9_ECTSI1.330e-6546.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CIB7_9STRA1.470e-4038.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067BZG8_SAPPC1.800e-3235.43Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3F2RY91_9STRA1.860e-3036.36Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A1V9Z5L8_9STRA5.470e-3033.90Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A5D6Y8C8_9STRA8.030e-3034.25Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485KJU9_9STRA6.780e-2930.00Aste57867_8246 protein n=1 Tax=Aphanomyces stellat... [more]
K3W6H9_GLOUD4.980e-2830.25Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3H526_PHYRM6.860e-2834.19Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:997342..999826 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.5
Seed ortholog evalue1.9e-56
Seed eggNOG ortholog2880.D8LTC9
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0007275,GO:0008150,GO:0009791,GO:0009908,GO:0009966,GO:0010646,GO:0010928,GO:0022414,GO:0023051,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048479,GO:0048480,GO:0048519,GO:0048523,GO:0048583,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0051302,GO:0051782,GO:0061458,GO:0065007,GO:0090567,GO:0099402
EggNOG OGs2BY93@1,2S2GY@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_006090.1
Exons4
Model size1158
Cds size1035
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.159.1prot_S-ischiensis_contig1.159.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 997357..999718 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815390.0177195-UTR-S-ischiensis_contig1:997341..9973561622815390.0177195-UTR-S-ischiensis_contig1:997341..997356Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 997342..997356 +
1695739676.038212-UTR-S-ischiensis_contig1:997341..9973561695739676.038212-UTR-S-ischiensis_contig1:997341..997356Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 997342..997356 +
1622815390.0726635-UTR-S-ischiensis_contig1:999718..9998261622815390.0726635-UTR-S-ischiensis_contig1:999718..999826Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 999719..999826 +
1695739676.1040847-UTR-S-ischiensis_contig1:999718..9998261695739676.1040847-UTR-S-ischiensis_contig1:999718..999826Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 999719..999826 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815390.0313485-CDS-S-ischiensis_contig1:997356..9975011622815390.0313485-CDS-S-ischiensis_contig1:997356..997501Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 997357..997501 +
1695739676.0524626-CDS-S-ischiensis_contig1:997356..9975011695739676.0524626-CDS-S-ischiensis_contig1:997356..997501Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 997357..997501 +
1622815390.0419006-CDS-S-ischiensis_contig1:997650..9977981622815390.0419006-CDS-S-ischiensis_contig1:997650..997798Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 997651..997798 +
1695739676.0681193-CDS-S-ischiensis_contig1:997650..9977981695739676.0681193-CDS-S-ischiensis_contig1:997650..997798Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 997651..997798 +
1622815390.0519059-CDS-S-ischiensis_contig1:998136..9986021622815390.0519059-CDS-S-ischiensis_contig1:998136..998602Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 998137..998602 +
1695739676.0834055-CDS-S-ischiensis_contig1:998136..9986021695739676.0834055-CDS-S-ischiensis_contig1:998136..998602Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 998137..998602 +
1622815390.0621963-CDS-S-ischiensis_contig1:999442..9997181622815390.0621963-CDS-S-ischiensis_contig1:999442..999718Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 999443..999718 +
1695739676.094037-CDS-S-ischiensis_contig1:999442..9997181695739676.094037-CDS-S-ischiensis_contig1:999442..999718Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 999443..999718 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.159.1

>prot_S-ischiensis_contig1.159.1 ID=prot_S-ischiensis_contig1.159.1|Name=mRNA_S-ischiensis_contig1.159.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=345bp
MAKRSREDWSSSDDRHSKKKKHHKDKKKDKKKDKKKDKHEKRGDEDVAVD
VPISDTDYFARSTEFKVWLLTTRKTAFEDLTSKESHKFFSKFVKAWNSGK
LDAMYYQGQIPDHLKAQARKTRHAWGFVNRLSGQDQARLEATHDSVHVST
EKVRGVSSNIPVAGPGGLAAGPGPGPGPGPGPGPGPGPGRGMGPRAGHQG
PMGPGRGDQDSREVRRKQRIAENKQGRERRNMVLEEMAPKETGRAAALDR
RREVGARTHASARERESMQDGLDMKESDTMGGGGGFQQEVARVQAARQRR
HAAATERVSGLRQQEEEKRAAFMAQMGIKAGMGPIKIRPRNDPA*
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mRNA from alignment at S-ischiensis_contig1:997342..999826+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.159.1 ID=mRNA_S-ischiensis_contig1.159.1|Name=mRNA_S-ischiensis_contig1.159.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2485bp|location=Sequence derived from alignment at S-ischiensis_contig1:997342..999826+ (Schizocladia ischiensis KU_0333)
GGGCGGACGCTGGCAATGGCGAAGAGGAGCAGGGAAGACTGGTCCAGCTC GGATGACCGGCACAGCAAGAAAAAGAAACACCACAAGGACAAGAAGAAGG ACAAGAAGAAGGACAAGAAGAAGGACAAGCACGAAAAACGGGGGGACGAA GATGTGGCAGGCACGTTGCAATCTCGACCAAACTGCAGCACAAGCCCAAT GACTGCATCACCAAGTTACGCGTGGTACAGTTCCATCTAGCGACGTATTA GCCCCTGGGATCACCATTTGACGCTGCCCCCCCCCCCCTTCCATGCTGCT ACCTCACAGTCGACGTCCCAATCAGCGATACGGACTACTTCGCTCGTTCA ACAGAGTTCAAGGTGTGGTTGCTGACCACCCGCAAGACCGCCTTCGAAGA TCTGACCTCCAAGGAGTCTCACAAGTTCTTCAGCAAGTTCGTCAAGGCGT GGAACAGGTACTACAAACCACAACAAACGAGTCACCCACCCTCGCAACCA TCTCACAGCACTGCAGCGCTCCCTCAGACCCTCTCGTTTCCCGCCGCGGT GGTTGTTCCCCAAGCCCTGCACCGCGGGCCCAAGCTACCGGGCCGACCGG CCTACAGTATGTGATCAACATTCTTAAATGGGACAACTACTAACACGAGA ACAGTCAATCTCACACAAAATGGGACAACTACTAACACGAGAACAGTCAA TCTCACACAAGTGCGATTGTACTTCGAAGATACCTCGTTACAATATATAT GAATCACCACCCTTCGTCCCCGCCTGCCCCCCTCTCATACTCTAGCGGCA AGCTGGACGCCATGTACTACCAAGGCCAAATCCCGGACCACCTCAAGGCC CAGGCCCGGAAAACACGCCACGCTTGGGGCTTCGTCAACCGCCTGTCGGG ACAGGACCAGGCGCGACTGGAGGCGACCCATGACTCGGTCCACGTCAGCA CCGAAAAGGTGCGGGGCGTCAGCAGCAACATACCCGTCGCTGGCCCCGGC GGTCTGGCTGCCGGGCCAGGACCAGGACCAGGGCCAGGGCCGGGACCAGG GCCGGGACCAGGGCCGGGGCGGGGGATGGGCCCGCGGGCGGGGCACCAGG GGCCCATGGGCCCTGGCAGAGGAGACCAGGACTCCAGGGAGGTTCGGAGG AAGCAGAGGATAGCGGAGAACAAGCAGGGGCGGGAGCGGCGCAATATGGT GTTGGAGGAGATGGCCCCCAAGGAGACGGGCCGGGCGGCGGCCTTGGACC GGAGGAGGGAGGTGAGACTGGCCAGCGTGGGGCCACTTGCTCTGTTGGAG GCGCTTGGCGTCGCGCGCGCTCGCACGTGCGGGGGACGATCGGCCGCGGC ATGGGAGCACTTCGAAACACTTGAACCGTACTTGTTCACTTGCTGCAGCT ACTTCCAAGTATACTCTAAGTATGCTCTATACTTGGAAGTATCGGTCATG TGAGGTGCTGTGAAGTACCAGCAAGTTATGTACTGCCCGTGCGGTGCTTG TTCGTCGCGGGCGTGGGACGGTTAGACCGCGGGCCGACACCCCAAGCGGC GGAGCGGGTCGCCGCCCCCCCGCCGTGCCCCCCCCCCGGCTGTTGAGGTG CCCGATTGGTCAAAGCCTCTCGGAGTGGTACAATGTCTAACGTGAGGAAC ACTGATTGTGTTTTGATGGACCTTACTTCACCCTTTTACCCCTGGTAAAT TGGACTTACACACTAAAACCCTATGATTATACGACCCCCAGGGGTATAAA GGTTAAGTACGAAGTACAGTACTCTGTACTCGTGCACTGTATGCGCACTG AGTGTTTTGAGTACGAGTGCAGTAGATTCTCCCGAGTGTGGGCTGACACC TGCAGGGCTTTTTGACCGGCCGTTTTATCCCCTCGCCGTGAGAGGCGGTC GGACCTCCTCGTCCCGGGTCCAGTGCTCCCGCCCACACGACCAGCACGGT CCAAGTGGCGCACAAATCGCTGTGGGCCACAGTCATGGGCACACGCGTCC ATGCACCCTCTTGCTCCAGACAGTACGCAACCGCACAGAGCTGCCACTGA CACCGGCCACAGACACTCACATCACCTACTCCACCAACCAACCCCCACCA GGTGGGTGCGAGGACACATGCCTCCGCCAGGGAGCGGGAGTCCATGCAGG ATGGGCTGGACATGAAGGAGTCCGACACCATGGGAGGCGGCGGCGGCTTC CAGCAGGAGGTGGCCCGCGTGCAGGCCGCCCGGCAACGGCGGCATGCGGC CGCCACCGAGAGGGTGAGCGGGCTGCGGCAGCAGGAGGAGGAGAAGCGGG CGGCGTTCATGGCACAGATGGGCATCAAGGCCGGCATGGGTCCCATTAAA ATCAGGCCCCGGAACGACCCTGCATGAGGGGGCCCGGGCGGGGGGGCATA GTATATGTACTTAATCGCGTTGTGCTTGCCGTAGTCCCGATACCATTGAT CACACGCCTCGATCGAGACGGAGCAGTGGGAGAGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig1:997342..999826+

>mRNA_S-ischiensis_contig1.159.1 ID=mRNA_S-ischiensis_contig1.159.1|Name=mRNA_S-ischiensis_contig1.159.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2070bp|location=Sequence derived from alignment at S-ischiensis_contig1:997342..999826+ (Schizocladia ischiensis KU_0333)
ATGGCGAAGAGGAGCAGGGAAGACTGGTCCAGCTCGGATGACCGGCACAG
CAAGAAAAAGAAACACCACAAGGACAAGAAGAAGGACAAGAAGAAGGACA
AGAAGAAGGACAAGCACGAAAAACGGGGGGACGAAGATGTGGCAGATGGC
GAAGAGGAGCAGGGAAGACTGGTCCAGCTCGGATGACCGGCACAGCAAGA
AAAAGAAACACCACAAGGACAAGAAGAAGGACAAGAAGAAGGACAAGAAG
AAGGACAAGCACGAAAAACGGGGGGACGAAGATGTGGCAGTCGACGTCCC
AATCAGCGATACGGACTACTTCGCTCGTTCAACAGAGTTCAAGGTGTGGT
TGCTGACCACCCGCAAGACCGCCTTCGAAGATCTGACCTCCAAGGAGTCT
CACAAGTTCTTCAGCAAGTTCGTCAAGGCGTGGAACAGTCGACGTCCCAA
TCAGCGATACGGACTACTTCGCTCGTTCAACAGAGTTCAAGGTGTGGTTG
CTGACCACCCGCAAGACCGCCTTCGAAGATCTGACCTCCAAGGAGTCTCA
CAAGTTCTTCAGCAAGTTCGTCAAGGCGTGGAACAGCGGCAAGCTGGACG
CCATGTACTACCAAGGCCAAATCCCGGACCACCTCAAGGCCCAGGCCCGG
AAAACACGCCACGCTTGGGGCTTCGTCAACCGCCTGTCGGGACAGGACCA
GGCGCGACTGGAGGCGACCCATGACTCGGTCCACGTCAGCACCGAAAAGG
TGCGGGGCGTCAGCAGCAACATACCCGTCGCTGGCCCCGGCGGTCTGGCT
GCCGGGCCAGGACCAGGACCAGGGCCAGGGCCGGGACCAGGGCCGGGACC
AGGGCCGGGGCGGGGGATGGGCCCGCGGGCGGGGCACCAGGGGCCCATGG
GCCCTGGCAGAGGAGACCAGGACTCCAGGGAGGTTCGGAGGAAGCAGAGG
ATAGCGGAGAACAAGCAGGGGCGGGAGCGGCGCAATATGGTGTTGGAGGA
GATGGCCCCCAAGGAGACGGGCCGGGCGGCGGCCTTGGACCGGAGGAGGG
AGCGGCAAGCTGGACGCCATGTACTACCAAGGCCAAATCCCGGACCACCT
CAAGGCCCAGGCCCGGAAAACACGCCACGCTTGGGGCTTCGTCAACCGCC
TGTCGGGACAGGACCAGGCGCGACTGGAGGCGACCCATGACTCGGTCCAC
GTCAGCACCGAAAAGGTGCGGGGCGTCAGCAGCAACATACCCGTCGCTGG
CCCCGGCGGTCTGGCTGCCGGGCCAGGACCAGGACCAGGGCCAGGGCCGG
GACCAGGGCCGGGACCAGGGCCGGGGCGGGGGATGGGCCCGCGGGCGGGG
CACCAGGGGCCCATGGGCCCTGGCAGAGGAGACCAGGACTCCAGGGAGGT
TCGGAGGAAGCAGAGGATAGCGGAGAACAAGCAGGGGCGGGAGCGGCGCA
ATATGGTGTTGGAGGAGATGGCCCCCAAGGAGACGGGCCGGGCGGCGGCC
TTGGACCGGAGGAGGGAGGTGGGTGCGAGGACACATGCCTCCGCCAGGGA
GCGGGAGTCCATGCAGGATGGGCTGGACATGAAGGAGTCCGACACCATGG
GAGGCGGCGGCGGCTTCCAGCAGGAGGTGGCCCGCGTGCAGGCCGCCCGG
CAACGGCGGCATGCGGCCGCCACCGAGAGGGTGAGCGGGCTGCGGCAGCA
GGAGGAGGAGAAGCGGGCGGCGTTCATGGCACAGATGGGCATCAAGGCCG
GCATGGGTCCCATTAAAATCAGGCCCCGGAACGACCCTGCATGAGTGGGT
GCGAGGACACATGCCTCCGCCAGGGAGCGGGAGTCCATGCAGGATGGGCT
GGACATGAAGGAGTCCGACACCATGGGAGGCGGCGGCGGCTTCCAGCAGG
AGGTGGCCCGCGTGCAGGCCGCCCGGCAACGGCGGCATGCGGCCGCCACC
GAGAGGGTGAGCGGGCTGCGGCAGCAGGAGGAGGAGAAGCGGGCGGCGTT
CATGGCACAGATGGGCATCAAGGCCGGCATGGGTCCCATTAAAATCAGGC
CCCGGAACGACCCTGCATGA
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