mRNA_S-ischiensis_contig1.1207.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.1207.1
Unique NamemRNA_S-ischiensis_contig1.1207.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: A0A836C8E3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 3.640e-72
Identity = 134/263 (50.95%), Postives = 177/263 (67.30%), Query Frame = 1 
Query:  184 IKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTADAESCSRIVEYYG-VNQDKGNVSIAVEYVAGGSLQSWIDNGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNSAVVGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEFEQICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRPNLEEIMAHPFLE 969
            +KL  LGKG++S V+ AV V TL +VALK+  + + A R++VR E++ALRTQRSPLMD  F  D  +   IV +YG V   +    +AVE VAGGSLQ++ID G   PEPWLAH+A+  L AL  LH + RTHRDIKPAN L+T EG+ KLADFG A+ D    +VGTRR++ PE LKGE   P SD+WS GL++A AA  + PV++A NEFEQ+  AE    TI+ L  +S     FL+ CL  +P  R ++ E++ HPFL+
Sbjct:    1 LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQ 263
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BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: A0A835Z6W9_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W9_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.480e-48
Identity = 95/193 (49.22%), Postives = 126/193 (65.28%), Query Frame = 1 
Query:  394 IVEYYGVNQDKGN-VSIAVEYVAGGSLQSWIDNGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNSAVVGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEFEQICVAESASRTISGLLELSTPFVA-FLAQCLAPSPESRPNLEEIMAHPFL 966
            IV++YG      + V +A+EYV GGSLQ+WID     PEPWLAH+++Q L AL +LH   R H D+KPAN+LVTREG+ KLADFG A+      ++GTRR+MAPE LKGE   P SD+WS GL++A AAL E PV++A NEF+Q+   E     I+      +P +  FL  CL P P +R  +  ++ HPFL
Sbjct:    1 IVKFYGCYTPVAHTVCLAMEYVGGGSLQAWIDRHAAAPEPWLAHISHQCLLALQYLHSCGRAHCDVKPANVLVTREGDAKLADFGCASSSVARTMLGTRRYMAPERLKGEQVVPESDVWSFGLAMAAAALAECPVAQAHNEFDQVHEGERVRGFIAAQHGALSPELRDFLCACLEPDPAARAGVAALLRHPFL 193
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: A0A6H5L7B9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B9_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.390e-45
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 1 
Query:  133 SPLISSRNIVPELGSKVIKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTADAESCSRIVEYYG-VNQDKGNVSIAVEYVAGGSLQSWIDNGFR--CPEPWLAHLAYQALEALCFLHRSC 570
            SPLIS+RN+VP L   V++LD LGKG+TS VF AVH  TL++VALK+V VS+DA R +VR E+RAL+TQRSPL++S FT    SC RIV+YYG V ++ GN  IAVEYVAGGSL++W++N     CPEPW AH+ +QALE      R C
Sbjct:   35 SPLISTRNLVPGLSESVVQLDILGKGATSNVFLAVHAATLKMVALKEVTVSNDADRWAVRTEMRALKTQRSPLLNSAFTTKLASCPRIVDYYGSVVRENGNACIAVEYVAGGSLENWLENSGASVCPEPWFAHITHQALEVRERKQRRC 183
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: D7FHW2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW2_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 2.630e-44
Identity = 86/141 (60.99%), Postives = 110/141 (78.01%), Query Frame = 1 
Query:  133 SPLISSRNIVPELGSKVIKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTADAESCSRIVEYYG-VNQDKGNVSIAVEYVAGGSLQSWIDNGFR--CPEPWLAHLAYQALEA 546
            SPLIS+RN+VP L   V++LD LGKG+TS VF AVH  TL++VALK+V VS+DA R +VR E+RAL+TQRSPL++S FT    SC RIV+YYG V ++ GN  IAVEYVAGGSL++W++N     CPEPW AH+ +QALE+
Sbjct:   85 SPLISTRNLVPGLSESVVQLDILGKGATSNVFLAVHAATLKMVALKEVTVSNDADRWAVRTEMRALKTQRSPLLNSTFTTKLASCPRIVDYYGSVVRENGNACIAVEYVAGGSLENWLENSGASVCPEPWFAHITHQALES 225
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BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: A0A7S1G7U4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7U4_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.820e-42
Identity = 115/289 (39.79%), Postives = 164/289 (56.75%), Query Frame = 1 
Query:  166 ELGSKVIKLDS-LGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTADAESCSR-----IVEYYGVNQ--DKGNVSIAVEYVAGGSLQSWID-NGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNS-----AVVGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEFE-QICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRPNLEEIMAHPFL-ELRHGW 984
            ++ S+++ L+  LGKG++  V +AVH+ TLQLVA+K V +     R  + RE++ L     P+      A A          +VE+Y      D G VSI +EY+ GGSLQ  ++  G R  EP LA +AYQALE L FLH   + HRDIKPANLL +R+G +KLADFG+A    ++       VGT  +MAPE ++ E  +  SD+WSLGLSL T A GE P S +   +     + +  +  +    E S  F  F+AQCL  SP +RP   +++ HPF+ E+R  +
Sbjct:   18 DIRSELVLLEGDLGKGASGVVRKAVHLPTLQLVAIKHVRIHDREKRQLMVRELKTLYQNIVPIDARAPKATASPAPLPASPFVVEFYDAYTAVDAGMVSIVMEYMNGGSLQGLVEARGPRPSEPQLASIAYQALEGLAFLHARHQIHRDIKPANLLCSRDGAVKLADFGIARQLADTWAQAKTFVGTLIYMAPERIESEAYSYPSDIWSLGLSLLTIAHGEFPYSTSGGYWTLSRAIKDDPAPVVRP--EFSDAFRDFVAQCLEKSPMARPRAIDLLDHPFVAEVRRSF 304
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: D7FHW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHW3_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 5.390e-40
Identity = 98/206 (47.57%), Postives = 124/206 (60.19%), Query Frame = 1 
Query:  544 ALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNSAVVGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEFEQICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRPNLEEIMAHPFLELRHGWEQTCPLVVNAMRTQKLAQRNATGLTTAGVVDAIVTARARCGLAGRKVGRSSLEDLAYEL 1161
            AL F+H   R HRD+KPANLL+TR G+LKL DFG A  + +S +VGT+RFMAPE LKG  A   SDLWSLGLSLATAA G+  +S+ SN+F Q+ +A    R +S    LS   + FL  CL+  P  RP L ++M HPFL  R  W+  CP V  AM+ +K  Q          V+DA+   RA   L G     ++  DLAYEL
Sbjct:    2 ALDFVHSCGRVHRDVKPANLLITRNGDLKLGDFGAAGVENSSRMVGTQRFMAPERLKGHRATAQSDLWSLGLSLATAAFGDDFISQGSNQFVQLDMACRVRRRLSKTTTLSAELMDFLHSCLSRDPARRPALRDLMKHPFLSQRQNWQAKCPEVALAMQDRKRLQSGDVSAIEE-VLDALCHVRAEENLIGTSFDPATAADLAYEL 206
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: F0WJK7_9STRA (Serine/threonine protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJK7_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.870e-38
Identity = 103/280 (36.79%), Postives = 155/280 (55.36%), Query Frame = 1 
Query:  160 VPELGSKVIKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTADAES---CSRIVEYYG--VNQDKGNVSIAVEYVAGGSLQSWIDNGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNSAV-----VGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEFEQICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRPNLEEIMAHPFLE 969
            V  +  + IKL  LG+G++  V + +H+ +L LVA+KD+ V   A R+ +  E++ L    S L D   T    +   C  IV  Y   +N ++G VSI VEY+ GGSLQ  +D+G    E  LA++A   L  L  LH   + HRDIKP+NLL+   G +K++DFG+A +  +S       VGT  +M+PE +  E  +  SD+WSLGLSL T ALGE P S  +  +E +    +    I      S  F  F+ +CLA +   R N+++++ HPF++
Sbjct:   94 VHTIRKQFIKLSVLGRGASGVVHKVIHLPSLMLVAIKDIPVYECAKRHQLITEIKTLYNNLSTLSDESTTKAPRTLAPCPEIVCLYDAFMNPNEGYVSIVVEYMDGGSLQDIVDSGGCKSERVLANIAQCVLRGLSHLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREMEDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSLLTCALGEFPYSSRNGYWELLHKIRNEPPPILPRGSFSVTFRDFMEKCLAKNEVERWNVKQLLDHPFIK 373
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: A0A024G2F5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2F5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.730e-35
Identity = 98/271 (36.16%), Postives = 154/271 (56.83%), Query Frame = 1 
Query:  184 IKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTADAES---CSRIVEYYG--VNQDKGNVSIAVEYVAGGSLQSWIDNGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNSAV-----VGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEFEQICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRPNLEEIMAHPFL 966
            +KL  LG+G++  V +A+H+ +L LVA+KD+ V   A R+ +  E++ L    S L D   T    +   C  I+  Y   +N ++G VSI VEY+ GGSLQ  +D+G    E  LA++A   L+ L +LH   + HRDIKP+NLL+   G +K++DFG+A +  +S       VGT  +M+PE +  E  +  SD+WSLGLS+ T ALG+ P S  +  +E +    +    +      S  F  F+A+CLA +   R  +++++ HPF+
Sbjct:  591 LKLGVLGRGASGVVHKAIHLPSLMLVAIKDIPVYECAKRHQLIAEIKTLYDNLSTLSDDNTTKALRTLAPCPEILCLYDAYMNPNEGYVSIVVEYMDGGSLQDIVDSGGCNSELVLANIARCVLKGLSYLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREMEDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSILTCALGKFPYSSKNGYWELLHKIRNEPPPMLPKDSFSNTFRDFMAKCLAKNEAERWTVQQLLLHPFV 861
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: A0A8K1CH23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH23_PYTOL)

HSP 1 Score: 152 bits (385), Expect = 1.760e-34
Identity = 96/271 (35.42%), Postives = 153/271 (56.46%), Query Frame = 1 
Query:  181 VIKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTADAE-SCSRIVEYYG--VNQDKGNVSIAVEYVAGGSLQSWIDNGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNSAV-----VGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEFEQICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRPNLEEIMAHPFLE 969
            +IK   LG+G++  V +A+HV +L LVA+K + V  +  R+ +  E++AL    S L D    +    +C  IV  Y   +N ++GNVSI VEY+ GGSLQ  ++ G    E  LA+++Y+ L+ L FLH + + HRDIKP NLL+   G +K++DFG+  +  NS       VGT  +M+PE +  E  +  SD+WS+GLS+ T ALG+ P +     +E + +  +         E S  F  FL +CL      R ++++++ H F++
Sbjct:  324 LIKFGVLGRGASGVVHKALHVPSLLLVAVKVIPVFENDKRHQLIAELKALYNNLSTLSDDAADSRKNVACPEIVCLYDAFMNPNEGNVSIVVEYMDGGSLQDIVETGGCKSESVLANISYRVLKGLSFLHSTHQLHRDIKPGNLLINHFGEVKISDFGIVREMENSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSMGLSIMTCALGKFPYASKGGYWELLHMIRNEPPPQLPEGEFSDKFRDFLDKCLKKDQNERWSVKQLLQHDFVK 594
[Close]
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Match: T0SAJ9_SAPDV (STE/STE7 protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SAJ9_SAPDV)

HSP 1 Score: 144 bits (363), Expect = 7.450e-33
Identity = 99/293 (33.79%), Postives = 148/293 (50.51%), Query Frame = 1 
Query:  166 ELGSKVIKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALRTQRSPLMDSGFTAD----------------AESCSRIVEYYGV--NQDKGNVSIAVEYVAGGSLQSWIDNGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKLADFGLATDDGNSAVV-----GTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALGESPVSKASNEF--EQICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRPNLEEIMAHPFLE 969
            +L +   +   LGKG+   V+ A ++ +LQL+A+K+V +     ++ V  E+ AL     PL+ +                     A  C +IV +YG     +K +VSIA+EY+  G+LQ++ID     PE  L H++Y   +AL  +HR    HRDIKPAN+LV   G  K+ADFGLA+    SA       GT  +M+PE ++G   +  SD+WS+G++L T +LG+ P       F  E   V E      +     S    AF+A  L   P +R   EE +AH FL+
Sbjct:   87 DLATDTCRFKRLGKGAGGAVYLACYLPSLQLIAIKEVVMHHVEDQHMVAHELHALHDNLVPLVQAATHKSIKFLGKLSHRKLHIGIAHPCPQIVSFYGAFATPNKTSVSIAMEYMDCGTLQTFIDKKIVLPESILRHISYCTAQALAHMHRYRMLHRDIKPANILVDHNGEFKIADFGLASTLSKSASYSSDFQGTMMYMSPERIQGNEYSYPSDIWSIGVTLLTLSLGKYPFDNQEGFFGLEDAIVNEPIPGPPA---TFSAACQAFIAALLVKDPSARLTAEEALAHDFLK 376
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8E3_9STRA3.640e-7250.95Kinase-like domain-containing protein (Fragment) n... [more]
A0A835Z6W9_9STRA4.480e-4849.22Kinase-like domain-containing protein (Fragment) n... [more]
A0A6H5L7B9_9PHAE2.390e-4559.06Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FHW2_ECTSI2.630e-4460.99Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S1G7U4_9STRA8.820e-4239.79Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
D7FHW3_ECTSI5.390e-4047.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0WJK7_9STRA1.870e-3836.79Serine/threonine protein kinase putative n=1 Tax=A... [more]
A0A024G2F5_9STRA1.730e-3536.16Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A8K1CH23_PYTOL1.760e-3435.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
T0SAJ9_SAPDV7.450e-3333.79STE/STE7 protein kinase n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:8174296..8178706 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.9
Seed ortholog evalue4.5e-40
Seed eggNOG ortholog2880.D7FHW3
KEGG koko:K08838
EggNOG free text desc.MAP kinase kinase kinase kinase activity
EggNOG OGsKOG0201@1,KOG0201@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Exons4
Model size3084
Cds size1851
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1207.1prot_S-ischiensis_contig1.1207.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 8174329..8177506 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815490.9077966-UTR-S-ischiensis_contig1:8174295..81743281622815490.9077966-UTR-S-ischiensis_contig1:8174295..8174328Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 8174296..8174328 +
1695739732.0848095-UTR-S-ischiensis_contig1:8174295..81743281695739732.0848095-UTR-S-ischiensis_contig1:8174295..8174328Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 8174296..8174328 +
1622815490.9660745-UTR-S-ischiensis_contig1:8177506..81787061622815490.9660745-UTR-S-ischiensis_contig1:8177506..8178706Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 8177507..8178706 +
1695739732.1323016-UTR-S-ischiensis_contig1:8177506..81787061695739732.1323016-UTR-S-ischiensis_contig1:8177506..8178706Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 8177507..8178706 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815490.9198413-CDS-S-ischiensis_contig1:8174328..81745031622815490.9198413-CDS-S-ischiensis_contig1:8174328..8174503Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8174329..8174503 +
1695739732.09625-CDS-S-ischiensis_contig1:8174328..81745031695739732.09625-CDS-S-ischiensis_contig1:8174328..8174503Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8174329..8174503 +
1622815490.9341133-CDS-S-ischiensis_contig1:8174615..81749501622815490.9341133-CDS-S-ischiensis_contig1:8174615..8174950Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8174616..8174950 +
1695739732.1041024-CDS-S-ischiensis_contig1:8174615..81749501695739732.1041024-CDS-S-ischiensis_contig1:8174615..8174950Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8174616..8174950 +
1622815490.9445887-CDS-S-ischiensis_contig1:8175617..81765171622815490.9445887-CDS-S-ischiensis_contig1:8175617..8176517Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8175618..8176517 +
1695739732.112614-CDS-S-ischiensis_contig1:8175617..81765171695739732.112614-CDS-S-ischiensis_contig1:8175617..8176517Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8175618..8176517 +
1622815490.9555619-CDS-S-ischiensis_contig1:8177065..81775061622815490.9555619-CDS-S-ischiensis_contig1:8177065..8177506Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8177066..8177506 +
1695739732.123382-CDS-S-ischiensis_contig1:8177065..81775061695739732.123382-CDS-S-ischiensis_contig1:8177065..8177506Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 8177066..8177506 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.1207.1

>prot_S-ischiensis_contig1.1207.1 ID=prot_S-ischiensis_contig1.1207.1|Name=mRNA_S-ischiensis_contig1.1207.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=617bp
MRASSSRTSFLSLSVANHDDDGVSAFESPDGCPSPLISSRNIVPELGSKV
IKLDSLGKGSTSRVFRAVHVGTLQLVALKDVAVSSDAARNSVRREVRALR
TQRSPLMDSGFTADAESCSRIVEYYGVNQDKGNVSIAVEYVAGGSLQSWI
DNGFRCPEPWLAHLAYQALEALCFLHRSCRTHRDIKPANLLVTREGNLKL
ADFGLATDDGNSAVVGTRRFMAPECLKGEGAAPSSDLWSLGLSLATAALG
ESPVSKASNEFEQICVAESASRTISGLLELSTPFVAFLAQCLAPSPESRP
NLEEIMAHPFLELRHGWEQTCPLVVNAMRTQKLAQRNATGLTTAGVVDAI
VTARARCGLAGRKVGRSSLEDLAYELCMSSQELQEALETKESAPVSPQSS
AGGSTGCRSSDSNSDSPTHQRVNYTADRLKAELPMRDRLSRLKLYPRCFT
GREAVTWMLNTGVAHSPEDAVVLGGEMLKAGVFEHVRSEHLFEDRNLLYV
FTDAGRGAADAHTPRRHSLTRLAKTGLASVSSALHAVARDPRPTNHGRGP
LQRTHSCSALFGQALSPLRAPADSPVFVATASATSSMPLGSATPWKPALV
RSSSTPDTPDALSWSP*
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mRNA from alignment at S-ischiensis_contig1:8174296..8178706+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.1207.1 ID=mRNA_S-ischiensis_contig1.1207.1|Name=mRNA_S-ischiensis_contig1.1207.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4411bp|location=Sequence derived from alignment at S-ischiensis_contig1:8174296..8178706+ (Schizocladia ischiensis KU_0333)
TGCTGCTCTGGGAAAATCTGCGCGCACCACACAATGCGGGCTTCTTCGTC
CCGCACAAGCTTTTTGAGCCTGTCCGTCGCAAATCATGACGATGACGGGG
TTTCCGCGTTCGAGAGCCCGGATGGTTGTCCCAGCCCACTGATCAGCTCC
AGGAACATTGTTCCCGAGCTCGGGAGCAAGGTCATCAAACTAGACAGCCT
TGGGAAGGGTAAGCTTCGCTGATGCGTCGGCGGTTCTGCGTTCGGTTCAT
TGTGTCCTTCCTTACCCACAGCGGTTGCTCATTCAATCCCCCAACGCCCC
ACCCCCAAATGCACCACCAGGGAGCACCAGCCGGGTCTTCCGGGCTGTGC
ACGTCGGGACATTGCAATTGGTCGCCTTGAAGGACGTAGCTGTGAGCAGC
GATGCGGCTAGGAATTCCGTCCGGCGGGAGGTGCGCGCGTTGCGCACCCA
GCGTTCGCCGCTGATGGACTCGGGCTTCACCGCTGACGCGGAGTCTTGCT
CGCGAATTGTCGAGTACTATGGAGTGAATCAGGACAAGGGCAATGTGTCT
ATTGCAGTGGAGTACGTTGCTGGGGGAAGCTTGCAGAGCTGGATCGACAA
TGGCTTCCGCTGTCCGGAGCCGTGGTTGGCCCATCTCGCGTACCAAGCCC
TTGAGGTGAGCTAGATATACGTCTGTAGGTTCATCCCAGTGAAATTGTCG
TCCGGTGTACAATCCGCTTAATGGGGGCCTGTCTGCCTGGCACACTGCAG
GGATGTGGAAAGATGTGCGACCTGACTGGCAGCGCATATGGTCACGGACA
CCAGCAACAATGTGTCCGTGTTTCAATGTGTGTCTATCAGCATAGCCATG
TCGGCCGACAGCGCAAGTGCTGCTCTCCTGTCGACTTGCCATTGAGTCAT
GGCCGCCGCACCACTGCTGCGCCAAGACGGAGCATGTCAGGTTTGTTGTA
GCAGACAAGCGTACTCTACAGTACTGTAGCCTGTACGCCAAGCCCGCCGT
GTAAGGCATGCGGCTGCCGCAGGTATGGGCGACGAGCAACGAGAGCACTA
ACATTGCGTGGGTGCCCTCGGGAACCTCATTGTAGGTATGCTAAGTTTTC
CACCGGGCCTGGCCGATGGCCTTTGAGTTCAGAGGTACAGTAGGTGTTGT
CAGCGCATTGAAGAATGGTTGCACGGACGAGTGCTGTGCACTACTGTGCT
GTGCATGTTCTCGAGTAGTTTTTTTTTTTCGCCCTTCTCGCGGGTGTGGT
ACCGAACGCTAGGCTGCACGAGGGGGTTGTAGTAAACGCAAGCTTGTCCC
GCTGCATTCTTGTTTCCTCCAGGCACTGTGCTTCCTGCACAGGAGCTGCA
GAACTCATCGAGACATCAAGCCCGCCAACCTGCTTGTCACAAGGGAGGGA
AATCTGAAACTGGCCGATTTCGGCCTTGCCACGGACGACGGCAACTCTGC
CGTTGTGGGCACGAGGCGCTTCATGGCGCCGGAGTGCCTCAAGGGGGAGG
GGGCGGCCCCCAGCTCCGACCTTTGGTCCCTGGGTCTCTCCTTGGCTACA
GCTGCCCTGGGCGAAAGCCCTGTGAGCAAGGCGTCCAACGAGTTTGAGCA
GATCTGCGTCGCTGAGAGTGCCTCGAGGACCATCTCTGGCTTGCTCGAGC
TGTCAACACCCTTTGTGGCCTTCCTCGCGCAGTGCCTGGCACCAAGCCCG
GAGTCGCGCCCCAACCTGGAGGAGATCATGGCTCACCCATTCCTGGAGCT
GCGTCACGGCTGGGAGCAGACTTGCCCCCTGGTCGTCAACGCGATGCGGA
CCCAGAAACTTGCACAGCGAAATGCCACGGGCCTCACCACGGCGGGTGTG
GTGGACGCCATCGTCACTGCTCGTGCCAGGTGCGGCCTGGCGGGGCGCAA
GGTGGGCCGGTCTTCCCTGGAAGACCTTGCCTACGAGCTCTGCATGTCCT
CGCAGGAGCTGCAGGAAGCTCTGGAGACGAAAGAGAGCGCTCCGGTGAGC
CCCCAGTCGTCTGCTGGGGGGTCAACTGGCTGTCGGTCCAGCGACTCCAA
CAGTGACAGCCCCACACACCAACGGGTCAACTACACGGCCGACCGGCTCA
AGGCTGAGCTGCCGATGCGGGACCGCCTGTCCCGCCTCAAACTCTACCCG
CGGTGCTTCACGGGGCGAGAGGCGGTGACCTGGATGCTCAACACGGGCGT
GGCGCACAGCCCGGAGGACGCGGTGAGTTGCACAACTACCACGTGCCATG
CGAGCTGTGTGTTCGGACTCGGCCGCACCTATTTATGTGTAGTGCACGCA
CCTACCACACGAGCCACATTCGGTGGGCGCATGCGCTAGCTTGCGCAATT
CTGCAGCATACTTACTGCAATGTACAGTACTGCAGTACTGCCTGCTTGCC
GTACAGTACTTCTGAGGTATACCTGAGAATAGCCGTTAACGGTCGCCGGA
ATCGACATTTTAGCCGTTAAACGTGGCGCCCGCTTCGCTCACGGCCAACC
GGCACATGATTCTCTCCGTCTGGACCGCGGGATCACGTCGGTGTGCGCGT
CTTGCCTCAGCACAATCCTTTGTCGAGCAATGGCCGCGGAGAATGTTGGC
CTTTTGGTTGGTGAACCAGCTTGTAGGTACTGTACTGTAGTACTCACGCT
GTGCTTGCGTAGTCCCGGGACTATGGACAATGCGCTGTACGGCAGTACGC
AAGGGTATCCTGCAATGTGGGGGGTCCCTGATGCCCTCCGATGCGGTGTG
TCTGTGTGCTTGTCCCGCAGGTGGTGCTCGGCGGCGAGATGCTAAAGGCG
GGGGTCTTTGAACACGTGCGCAGCGAGCACCTCTTTGAGGACCGTAACCT
GCTCTACGTCTTCACCGATGCGGGCCGGGGCGCGGCTGACGCGCACACCC
CCCGCAGACACAGCCTGACACGGCTGGCCAAAACCGGGCTGGCCAGCGTG
AGCAGCGCACTGCACGCGGTCGCGAGGGACCCGAGGCCCACAAATCACGG
GCGGGGCCCGCTGCAACGCACCCACTCGTGCTCTGCCCTATTCGGCCAGG
CCCTGTCGCCCTTGAGAGCGCCTGCTGATAGCCCCGTCTTTGTCGCCACT
GCCTCGGCGACGAGCTCAATGCCCCTCGGATCGGCGACTCCGTGGAAGCC
AGCCCTGGTGCGGTCAAGCTCCACCCCGGATACGCCGGACGCTCTGAGCT
GGTCCCCATAGCGGCCCGTGCGTGAGGGGCCGCCGGGGCGATTAGTTGTT
GTACATATTTACCTTTTTTTTTCATCAGTGCTGTAAGTAGGATACTTGGA
AGTAGACCATATTCGTTTTGTATGTTCCGTCTGCAAGTGCGACGTACTTG
GGTGTGCGCTGCAGATCTGTGTGCTGGCCTTTTTCTGGCTGTTGGTGGAT
ACATGCAGCCCCTGTGTTTCCCGTCATTCTTGTAGAGCCATGGTGGGGAC
TTGGTTTAAATGGGGCACGGAGCACCAGGTGTGCCGTGTATGTCGTATAC
GTTGTGACGTCTACGTGCTGTGCCACAAAGTCCGAGCGGCCCGAACGGTT
GTTTTTATGGGGGGGCCTGCTGTCTGTGGCTGTGTGGCTCCCCAGAGTGA
GGGGGGCCTCTGTGTACATGTTTGTGTGTATTTTTTCGTGCTGTGGGGCG
ACCGCGCCCTTGAAGACGTGTTCATTTGCTCACACCAGAATAGGTCGAGG
GTCCGCTTTGATGCGCGGTCTGGACCCTGCCCCATTGTGTGTGTTTTGTA
AAGGCCACTGGGCCATACCCGGTACACCCGCCGTAACTCCGACCAGAACG
GGTACACATAGCACCTGAATACGGTCTCTTTGGCAACCCTGCTAGAGTAC
AGCGGGAGGGGTTTGTTGCACGGTGTTGGCAACTCTGCCGGGCAGTTTGA
GGTGACAAGCGGTTGGATTGTGGAGTACTTTCTACTACGTAGAAATCCGA
CCCCTAGTCGGTCGGCTCTGCCGATGGGTCGCCTGCGTCGTTTGTTGTTC
ACACTCGGCCTTTAGCTCGCTAGTTGGCTTGTTCGGACGCAATCAATCGT
TCGTTCTGTGCTTGTAGTCACGGCCGTGCACCACAACCACAACCTGTGGC
GAGACCGTTTGCGGGCAGCTGAGTAGAGGAGCGGCAAGCGGGACAGAATC
GGTTCTGCGCCAGTATGTAAGCAGAATGTTCTAGATAGCCGCCGGAAAAA
AATAGTATGTTAAGTTGAATCAATGACCCGCAACAGGCTTACCTCCACCG
TGCCGGCCCGGCCGACTTGTGATATGCAAGCGATAGGATTGAGCCCCCGC
TACACTCGAGGATGGACCCAAATTGAATGCTTGACACTACAACAGCTATA
TGGAAGGGCCACTGCTGAGGTCTCCAGTGACGTGGCCCGCACCTCGCCCC
GTGTTGTTCCT
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Coding sequence (CDS) from alignment at S-ischiensis_contig1:8174296..8178706+

>mRNA_S-ischiensis_contig1.1207.1 ID=mRNA_S-ischiensis_contig1.1207.1|Name=mRNA_S-ischiensis_contig1.1207.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3702bp|location=Sequence derived from alignment at S-ischiensis_contig1:8174296..8178706+ (Schizocladia ischiensis KU_0333)
ATGCGGGCTTCTTCGTCCCGCACAAGCTTTTTGAGCCTGTCCGTCGCAAA
TCATGACGATGACGGGGTTTCCGCGTTCGAGAGCCCGGATGGTTGTCCCA
GCCCACTGATCAGCTCCAGGAACATTGTTCCCGAGCTCGGGAGCAAGGTC
ATCAAACTAGACAGCCTTGGGAAGGATGCGGGCTTCTTCGTCCCGCACAA
GCTTTTTGAGCCTGTCCGTCGCAAATCATGACGATGACGGGGTTTCCGCG
TTCGAGAGCCCGGATGGTTGTCCCAGCCCACTGATCAGCTCCAGGAACAT
TGTTCCCGAGCTCGGGAGCAAGGTCATCAAACTAGACAGCCTTGGGAAGG
GGAGCACCAGCCGGGTCTTCCGGGCTGTGCACGTCGGGACATTGCAATTG
GTCGCCTTGAAGGACGTAGCTGTGAGCAGCGATGCGGCTAGGAATTCCGT
CCGGCGGGAGGTGCGCGCGTTGCGCACCCAGCGTTCGCCGCTGATGGACT
CGGGCTTCACCGCTGACGCGGAGTCTTGCTCGCGAATTGTCGAGTACTAT
GGAGTGAATCAGGACAAGGGCAATGTGTCTATTGCAGTGGAGTACGTTGC
TGGGGGAAGCTTGCAGAGCTGGATCGACAATGGCTTCCGCTGTCCGGAGC
CGTGGTTGGCCCATCTCGCGTACCAAGCCCTTGAGGGAGCACCAGCCGGG
TCTTCCGGGCTGTGCACGTCGGGACATTGCAATTGGTCGCCTTGAAGGAC
GTAGCTGTGAGCAGCGATGCGGCTAGGAATTCCGTCCGGCGGGAGGTGCG
CGCGTTGCGCACCCAGCGTTCGCCGCTGATGGACTCGGGCTTCACCGCTG
ACGCGGAGTCTTGCTCGCGAATTGTCGAGTACTATGGAGTGAATCAGGAC
AAGGGCAATGTGTCTATTGCAGTGGAGTACGTTGCTGGGGGAAGCTTGCA
GAGCTGGATCGACAATGGCTTCCGCTGTCCGGAGCCGTGGTTGGCCCATC
TCGCGTACCAAGCCCTTGAGGCACTGTGCTTCCTGCACAGGAGCTGCAGA
ACTCATCGAGACATCAAGCCCGCCAACCTGCTTGTCACAAGGGAGGGAAA
TCTGAAACTGGCCGATTTCGGCCTTGCCACGGACGACGGCAACTCTGCCG
TTGTGGGCACGAGGCGCTTCATGGCGCCGGAGTGCCTCAAGGGGGAGGGG
GCGGCCCCCAGCTCCGACCTTTGGTCCCTGGGTCTCTCCTTGGCTACAGC
TGCCCTGGGCGAAAGCCCTGTGAGCAAGGCGTCCAACGAGTTTGAGCAGA
TCTGCGTCGCTGAGAGTGCCTCGAGGACCATCTCTGGCTTGCTCGAGCTG
TCAACACCCTTTGTGGCCTTCCTCGCGCAGTGCCTGGCACCAAGCCCGGA
GTCGCGCCCCAACCTGGAGGAGATCATGGCTCACCCATTCCTGGAGCTGC
GTCACGGCTGGGAGCAGACTTGCCCCCTGGTCGTCAACGCGATGCGGACC
CAGAAACTTGCACAGCGAAATGCCACGGGCCTCACCACGGCGGGTGTGGT
GGACGCCATCGTCACTGCTCGTGCCAGGTGCGGCCTGGCGGGGCGCAAGG
TGGGCCGGTCTTCCCTGGAAGACCTTGCCTACGAGCTCTGCATGTCCTCG
CAGGAGCTGCAGGAAGCTCTGGAGACGAAAGAGAGCGCTCCGGTGAGCCC
CCAGTCGTCTGCTGGGGGGTCAACTGGCTGTCGGTCCAGCGACTCCAACA
GTGACAGCCCCACACACCAACGGGTCAACTACACGGCCGACCGGCTCAAG
GCTGAGCTGCCGATGCGGGACCGCCTGTCCCGCCTCAAACTCTACCCGCG
GTGCTTCACGGGGCGAGAGGCGGTGACCTGGATGCTCAACACGGGCGTGG
CGCACAGCCCGGAGGACGCGGCACTGTGCTTCCTGCACAGGAGCTGCAGA
ACTCATCGAGACATCAAGCCCGCCAACCTGCTTGTCACAAGGGAGGGAAA
TCTGAAACTGGCCGATTTCGGCCTTGCCACGGACGACGGCAACTCTGCCG
TTGTGGGCACGAGGCGCTTCATGGCGCCGGAGTGCCTCAAGGGGGAGGGG
GCGGCCCCCAGCTCCGACCTTTGGTCCCTGGGTCTCTCCTTGGCTACAGC
TGCCCTGGGCGAAAGCCCTGTGAGCAAGGCGTCCAACGAGTTTGAGCAGA
TCTGCGTCGCTGAGAGTGCCTCGAGGACCATCTCTGGCTTGCTCGAGCTG
TCAACACCCTTTGTGGCCTTCCTCGCGCAGTGCCTGGCACCAAGCCCGGA
GTCGCGCCCCAACCTGGAGGAGATCATGGCTCACCCATTCCTGGAGCTGC
GTCACGGCTGGGAGCAGACTTGCCCCCTGGTCGTCAACGCGATGCGGACC
CAGAAACTTGCACAGCGAAATGCCACGGGCCTCACCACGGCGGGTGTGGT
GGACGCCATCGTCACTGCTCGTGCCAGGTGCGGCCTGGCGGGGCGCAAGG
TGGGCCGGTCTTCCCTGGAAGACCTTGCCTACGAGCTCTGCATGTCCTCG
CAGGAGCTGCAGGAAGCTCTGGAGACGAAAGAGAGCGCTCCGGTGAGCCC
CCAGTCGTCTGCTGGGGGGTCAACTGGCTGTCGGTCCAGCGACTCCAACA
GTGACAGCCCCACACACCAACGGGTCAACTACACGGCCGACCGGCTCAAG
GCTGAGCTGCCGATGCGGGACCGCCTGTCCCGCCTCAAACTCTACCCGCG
GTGCTTCACGGGGCGAGAGGCGGTGACCTGGATGCTCAACACGGGCGTGG
CGCACAGCCCGGAGGACGCGGTGGTGCTCGGCGGCGAGATGCTAAAGGCG
GGGGTCTTTGAACACGTGCGCAGCGAGCACCTCTTTGAGGACCGTAACCT
GCTCTACGTCTTCACCGATGCGGGCCGGGGCGCGGCTGACGCGCACACCC
CCCGCAGACACAGCCTGACACGGCTGGCCAAAACCGGGCTGGCCAGCGTG
AGCAGCGCACTGCACGCGGTCGCGAGGGACCCGAGGCCCACAAATCACGG
GCGGGGCCCGCTGCAACGCACCCACTCGTGCTCTGCCCTATTCGGCCAGG
CCCTGTCGCCCTTGAGAGCGCCTGCTGATAGCCCCGTCTTTGTCGCCACT
GCCTCGGCGACGAGCTCAATGCCCCTCGGATCGGCGACTCCGTGGAAGCC
AGCCCTGGTGCGGTCAAGCTCCACCCCGGATACGCCGGACGCTCTGAGCT
GGTCCCCATAGGTGGTGCTCGGCGGCGAGATGCTAAAGGCGGGGGTCTTT
GAACACGTGCGCAGCGAGCACCTCTTTGAGGACCGTAACCTGCTCTACGT
CTTCACCGATGCGGGCCGGGGCGCGGCTGACGCGCACACCCCCCGCAGAC
ACAGCCTGACACGGCTGGCCAAAACCGGGCTGGCCAGCGTGAGCAGCGCA
CTGCACGCGGTCGCGAGGGACCCGAGGCCCACAAATCACGGGCGGGGCCC
GCTGCAACGCACCCACTCGTGCTCTGCCCTATTCGGCCAGGCCCTGTCGC
CCTTGAGAGCGCCTGCTGATAGCCCCGTCTTTGTCGCCACTGCCTCGGCG
ACGAGCTCAATGCCCCTCGGATCGGCGACTCCGTGGAAGCCAGCCCTGGT
GCGGTCAAGCTCCACCCCGGATACGCCGGACGCTCTGAGCTGGTCCCCAT
AG
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