mRNA_S-ischiensis_contig1.1199.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A6H5JLB4_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB4_9PHAE) HSP 1 Score: 272 bits (696), Expect = 1.150e-74 Identity = 150/290 (51.72%), Postives = 180/290 (62.07%), Query Frame = 1
Query: 142 HYYWKNANREGATSNCGGGTATSVAAAAAPLRQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSAEMMWSSDASISQVLLSIQTFILGAE-YPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARG-SSTEGHYRELLLCLESLLLQLIRLSRLVEEGNVPGPGPPPSPESPCA 1005
H++WK A EG+ A P RQRRL+ ELR+LAR LPL+W S AVR DE RPHLL+A +AAP GTPYDSG+F FD+YCPP+YP VPPKVNLMTTG VRF+PNLY CG VCLSLLGTW GS EMMWS DAS+ QVLLSIQ + + P G PG A G LR T WA+ E LR PP GFEA R H W KKWH+L V+ WL E++ + GHYR+L+ L++LL++LIRLS + + P P P+ P A
Sbjct: 1331 HHFWKVAEAEGS---------------AFPARQRRLVRELRSLARELPLYWESMIAVRTDEERPHLLKAMIAAPTGTPYDSGLFEFDIYCPPQYPSVPPKVNLMTTGRGRVRFSPNLYACGNVCLSLLGTWSGSPEMMWSPDASLLQVLLSIQANVHSWDPVPVLQRAGAGARLRAPGVHGSRSYFAQWGV--LRPQTVEWAMTEALRFPPRGFEALAREHLWRKKWHILDVVADWLRESKKPAGVRGHYRDLVTSLKNLLIELIRLSYSMGDCPYVPPRPVPASIEPAA 1603
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: D8LTA3_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA3_ECTSI) HSP 1 Score: 264 bits (674), Expect = 6.460e-72 Identity = 145/289 (50.17%), Postives = 173/289 (59.86%), Query Frame = 1
Query: 142 HYYWKNANREGATSNCGGGTATSVAAAAAPLRQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSAEMMWSSDASISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARG-SSTEGHYRELLLCLESLLLQLIRLSRLVEEGNVPGPGPPPSPESPCA 1005
H++WK A EG+ A P RQRRL+ ELR+LAR LPL+W S AVR+DE RPHLL+A +AAP GTPYDSG+F FD+YCPP+YP VPPKVNLMTTG VRF+PNLY CG VCLSLLGTW GS EMMWS DAS+ QVLLSIQ LR T WA+ E LR PP GFEA R H W KKWH+L V+ GWL E++ + GHYR+L+ L++LL +LIRLS + + P P P+ P A
Sbjct: 1040 HHFWKVAEAEGS---------------AFPARQRRLVRELRSLARELPLYWGSTIAVRMDEERPHLLKAMIAAPTGTPYDSGLFEFDIYCPPQYPSVPPKVNLMTTGRGRVRFSPNLYACGNVCLSLLGTWSGSPEMMWSPDASLLQVLLSIQV--------------------------------------LRPQTVEWAMTEALRFPPRGFEALAREHLWRKKWHILDVVAGWLRESKKPAGVRGHYRDLVTSLKNLLTELIRLSYSMGDCPYVPPWPVPASIEPAA 1275
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A7S3V258_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V258_9STRA) HSP 1 Score: 246 bits (627), Expect = 6.230e-68 Identity = 126/236 (53.39%), Postives = 160/236 (67.80%), Query Frame = 1
Query: 235 RQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTW--GGSAEMMWSSDASISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHYRELLLCLESLLLQLIRL 936
R RRL EL+AL + LPLH++S+ +RVD +RP +L+A V P TPY+SG F+FD+Y P +P+ PPKVNLMTTG TVRFNPNLY GKVCLSLLGTW G S W ++I QVL+SIQ+ ILG+EYPYFNEPG+E ++G G + R +NGGYERLRVAT AI L PP GFE + HF K+ +L L+ WL EA S ++GH+R L C + L +L +L
Sbjct: 451 RARRLNRELKALKKSLPLHFSSSIFLRVDPKRPFVLQALVTGPVRTPYESGCFLFDIYIPTGFPNEPPKVNLMTTGNGTVRFNPNLYNNGKVCLSLLGTWRGGASGSEQWQKTSTIYQVLVSIQSLILGSEYPYFNEPGVEAQWGTEQGELQKRIHSNGGYERLRVATTQHAILGMLLSPPAGFEQVIEKHFLVKRHVILNTLQQWLHEAAASDSKGHFRALSKCAQELRKELAKL 686
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A7S1CR62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CR62_9STRA) HSP 1 Score: 235 bits (599), Expect = 7.600e-68 Identity = 117/233 (50.21%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 241 RRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTW-GGSAEMMWSSDASISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHYRELLLCLESLLLQLIRL 936
+R+M ELR L + LPL + S+ +R D+ +P +++ + P TPYDSG F+FD+YC P YP P VNL TTG +VRFNPNLY CGKVCLSLLGTW GG W+ ++I QVL+SIQ IL +YPYFNEPG+E + G P G RT++NGGYE LRV T WA+ +QLR P GFE +R HF K+ H+L V + W+ EA S T GH+ L +++L ++L +L
Sbjct: 37 KRVMRELRGLKKSLPLGFESSIFLRYDKAKPFVMQVLIMGPHDTPYDSGAFLFDIYCSPEYPRGSPNVNLATTGGGSVRFNPNLYNCGKVCLSLLGTWRGGGRSEEWTDKSTILQVLVSIQALIL-VKYPYFNEPGVESQIGTPEGERGRRTSSNGGYEYLRVGTIQWAMVDQLRNPSPGFEDVIREHFRLKRRHILDVCDAWMAEAAVSDTAGHHASLKRQVDALRVELAKL 268
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A7S2R918_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R918_9STRA) HSP 1 Score: 251 bits (641), Expect = 1.680e-67 Identity = 125/236 (52.97%), Postives = 165/236 (69.92%), Query Frame = 1
Query: 235 RQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSA--EMMWSSDASISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHYRELLLCLESLLLQLIRL 936
R RRL EL+AL + LPLH+ S AVRVD +RP + + + AP TPYDSG F+FD+Y PP YP PPK+NLMTTG TVRFNPNLY GKVCLSLLGTW G A W+ ++S+ QVL+SIQ+ ILG+EYPYFNEPG+E ++G G + R +NGG+ERLR+AT +A+ QLR PP GFE ++ HF K+ H+L + WL EA+ S T+GH++ + + L ++L +L
Sbjct: 1750 RMRRLNRELKALRKSLPLHYNSTIAVRVDTKRPSVAQCVIFAPDCTPYDSGCFMFDIYFPPEYPSEPPKINLMTTGNGTVRFNPNLYNNGKVCLSLLGTWRGGATGSENWTKNSSLWQVLVSIQSAILGSEYPYFNEPGVESQWGTDQGDLQKRIHSNGGFERLRIATIQYAMVGQLRSPPAGFENVIQEHFRLKRRHILDFCDRWLKEAKDSDTKGHFKSISKQVADLRIELAKL 1985
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A7S2R958_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R958_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.080e-67 Identity = 125/236 (52.97%), Postives = 165/236 (69.92%), Query Frame = 1
Query: 235 RQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSA--EMMWSSDASISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHYRELLLCLESLLLQLIRL 936
R RRL EL+AL + LPLH+ S AVRVD +RP + + + AP TPYDSG F+FD+Y PP YP PPK+NLMTTG TVRFNPNLY GKVCLSLLGTW G A W+ ++S+ QVL+SIQ+ ILG+EYPYFNEPG+E ++G G + R +NGG+ERLR+AT +A+ QLR PP GFE ++ HF K+ H+L + WL EA+ S T+GH++ + + L ++L +L
Sbjct: 5749 RMRRLNRELKALRKSLPLHYNSTIAVRVDTKRPSVAQCVIFAPDCTPYDSGCFMFDIYFPPEYPSEPPKINLMTTGNGTVRFNPNLYNNGKVCLSLLGTWRGGATGSENWTKNSSLWQVLVSIQSAILGSEYPYFNEPGVESQWGTDQGDLQKRIHSNGGFERLRIATIQYAMVGQLRSPPAGFENVIQEHFRLKRRHILDFCDRWLKEAKDSDTKGHFKSISKQVADLRIELAKL 5984
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A2R5GYN2_9STRA (Ubiquitin-conjugating enzyme E2 Z n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYN2_9STRA) HSP 1 Score: 243 bits (621), Expect = 8.500e-65 Identity = 120/222 (54.05%), Postives = 157/222 (70.72%), Query Frame = 1
Query: 235 RQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSA--EMMWSSDASISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHYREL 894
R RRL EL+AL + LPLH+ S+ A+RVD++RP + + + AP TPYDSG F FD+Y PP YP PPK+NLMTTG +VRFNPNLY GKVCLSLLGTW G A W+ ++S+ QVL+SIQ+ ILG+E+PYFNEPG+E ++G G + R +NGGYERLRVAT A+ QLR PP GFE ++ HF KK H+L ++ W+ EA+ S T+ H + +
Sbjct: 6409 RMRRLNRELKALRKSLPLHFNSSIALRVDQKRPFVAQCIIFAPDNTPYDSGCFQFDIYFPPEYPSEPPKMNLMTTGGGSVRFNPNLYNNGKVCLSLLGTWRGGATGSENWTKNSSLWQVLVSIQSAILGSEFPYFNEPGVESQWGTEQGELQKRIHSNGGYERLRVATLQHAMLSQLRNPPPGFETLIQEHFRIKKHHILATVDRWVEEAKLSDTKSHLKSI 6630
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A485KTT4_9STRA (Aste57867_11529 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTT4_9STRA) HSP 1 Score: 215 bits (548), Expect = 5.600e-58 Identity = 115/223 (51.57%), Postives = 139/223 (62.33%), Query Frame = 1
Query: 229 PLRQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSAEMMWSSDAS-ISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHYREL 894
P RRL EL AL LP+H S AVRVD+ PH L + P TPYDSG F F L P YP PP V MTTG TVRF+PNLYECGKVCLS+LGTW G W+ S I QVL+SIQ ILGAE+PY+NEPG E ++G P G+ RTA NGG E +R+ T ++A + + PP GFE VR HFW K+ H++ + WL + R S T G Y +L
Sbjct: 323 PGSMRRLNQELVALPENLPVHEDSMIAVRVDDDHPHHLCVLITGPRQTPYDSGCFQFRLVVPGNYPQCPPAVQFMTTGQGTVRFSPNLYECGKVCLSILGTWQGDP---WNPVTSTILQVLVSIQGAILGAEFPYYNEPGRERQWGTPQGIRAERTAENGGLEPIRLGTVSFAWSLPMEHPPKGFETLVREHFWLKRMHLVETMALWLTDGRISDTLGFYTDL 542
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A024U5V2_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5V2_9STRA) HSP 1 Score: 212 bits (539), Expect = 7.210e-57 Identity = 122/247 (49.39%), Postives = 147/247 (59.51%), Query Frame = 1
Query: 184 NCGGGTATSVAAAAAPLRQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSAEMMWSSDASISQVLLSIQTFILGAEYPYFNEPGLEVEFGM-PGGMERA-RTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHYRELLLCLESLL 918
+C G T TS P RL EL LA LPLH S AVRVDE PH L + P TPYD+G F F + PP YP PP V MTTG TVRF+PNLY+CGKVCLSLLGTW G + +S +I QVL+SIQ ILGAE PYFNEPG E ++ P + R RT NGG E LR+AT +A ++ PP+ FE FVR HFW K+ VL + WL E R S + +Y +L+ C+ L
Sbjct: 300 DCVGQTTTSTTVL--PGSMGRLNQELLVLAENLPLHEGSMIAVRVDETHPHHLSVVITGPSNTPYDTGCFHFLVVVPPNYPQGPPAVRFMTTGGGTVRFSPNLYDCGKVCLSLLGTWSGDPWNVVTS--TILQVLVSIQGAILGAELPYFNEPGRERQWASSPDQLPRGVRTNPNGGLEPLRLATIRYAWTGAMKSPPVAFEDFVREHFWQKRHCVLRTMHKWLDEGRASDSLHYYDDLIACVAECL 542
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Match: A0A6G0XS90_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XS90_9STRA) HSP 1 Score: 204 bits (520), Expect = 4.250e-54 Identity = 111/220 (50.45%), Postives = 133/220 (60.45%), Query Frame = 1
Query: 229 PLRQRRLMPELRALARGLPLHWASAAAVRVDERRPHLLRAAVAAPGGTPYDSGVFVFDLYCPPRYPDVPPKVNLMTTGWNTVRFNPNLYECGKVCLSLLGTWGGSAEMMWSSDAS-ISQVLLSIQTFILGAEYPYFNEPGLEVEFGMPGGMERARTAANGGYERLRVATATWAIAEQLREPPLGFEAFVRTHFWHKKWHVLGVLEGWLMEARGSSTEGHY 885
P RRL EL +L LP+H S AVRVDE PH L + P TPYDSG F F L P YP PP V MTTG +VRF+PNLYECGKVCLSLLGTW G W+ S I QVL+SIQ ILGAE+PY+NEPG E ++G + RTA NGG E +R+ T +A + ++ PP+GFE V HFW K+ H+L + WL E S T Y
Sbjct: 318 PGSMRRLNQELVSLPDNLPVHEDSMIAVRVDEDHPHNLSVLITGPRKTPYDSGCFQFRLVVPGNYPQSPPAVQFMTTGKGSVRFSPNLYECGKVCLSLLGTWQGDP---WNPVTSTILQVLVSIQGAILGAEFPYYNEPGRERQWGSTQALHAERTAENGGLEPIRLGTVAYAWTDAIQNPPVGFENLVHEHFWLKRKHLLETMHLWLTEGLVSDTPMFY 534 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1199.1 >prot_S-ischiensis_contig1.1199.1 ID=prot_S-ischiensis_contig1.1199.1|Name=mRNA_S-ischiensis_contig1.1199.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=660bp GGDGADGIPEADQRQQRCEERYEEAVGCLQFDGVDLRVSEASEDLGHHYYback to top mRNA from alignment at S-ischiensis_contig1:8113774..8118726- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1199.1 ID=mRNA_S-ischiensis_contig1.1199.1|Name=mRNA_S-ischiensis_contig1.1199.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4953bp|location=Sequence derived from alignment at S-ischiensis_contig1:8113774..8118726- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:8113774..8118726- >mRNA_S-ischiensis_contig1.1199.1 ID=mRNA_S-ischiensis_contig1.1199.1|Name=mRNA_S-ischiensis_contig1.1199.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3960bp|location=Sequence derived from alignment at S-ischiensis_contig1:8113774..8118726- (Schizocladia ischiensis KU_0333)back to top |