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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 124.4 |
| Seed ortholog evalue | 1.5e-25 |
| Seed eggNOG ortholog | 2880.D7G6K8 |
| Preferred name | FBXO18 |
| KEGG ko | ko:K10300 |
| GOs | GO:0000018,GO:0000151,GO:0000152,GO:0000724,GO:0000725,GO:0000737,GO:0000785,GO:0001932,GO:0001934,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003690,GO:0003697,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006282,GO:0006302,GO:0006308,GO:0006310,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009607,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010498,GO:0010556,GO:0010558,GO:0010562,GO:0010569,GO:0010604,GO:0010605,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0015616,GO:0016043,GO:0016462,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0017117,GO:0019005,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019941,GO:0023051,GO:0023056,GO:0030163,GO:0030674,GO:0031146,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031461,GO:0032268,GO:0032270,GO:0032392,GO:0032446,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0034645,GO:0034655,GO:0035561,GO:0035562,GO:0036211,GO:0042325,GO:0042327,GO:0042623,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043138,GO:0043140,GO:0043142,GO:0043161,GO:0043170,GO:0043224,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043632,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0045005,GO:0045738,GO:0045910,GO:0045934,GO:0045937,GO:0046483,GO:0046700,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051100,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051276,GO:0051603,GO:0051716,GO:0060090,GO:0060255,GO:0060542,GO:0065007,GO:0065009,GO:0070035,GO:0070647,GO:0071103,GO:0071216,GO:0071495,GO:0071704,GO:0071840,GO:0072396,GO:0072402,GO:0072423,GO:0072429,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0090329,GO:0097159,GO:0140097,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902229,GO:1902231,GO:1902494,GO:1902531,GO:1902533,GO:1904949,GO:1990234,GO:1990518,GO:2000042,GO:2000104,GO:2000112,GO:2000113,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001022,GO:2001233,GO:2001235,GO:2001242,GO:2001244 |
| EggNOG free text desc. | ATP-dependent DNA helicase activity |
| EggNOG OGs | COG0210@1,KOG2108@2759 |
| EC | 3.6.4.12 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko04121 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1558 |
| Cds size | 1515 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815361.4098904-UTR-S-ischiensis_contig1:7990734..7990775 | 1622815361.4098904-UTR-S-ischiensis_contig1:7990734..7990775 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7990735..7990775 + |
| 1695739660.0164056-UTR-S-ischiensis_contig1:7990734..7990775 | 1695739660.0164056-UTR-S-ischiensis_contig1:7990734..7990775 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7990735..7990775 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815361.4235263-CDS-S-ischiensis_contig1:7990775..7991612 | 1622815361.4235263-CDS-S-ischiensis_contig1:7990775..7991612 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7990776..7991612 + |
| 1695739660.0393615-CDS-S-ischiensis_contig1:7990775..7991612 | 1695739660.0393615-CDS-S-ischiensis_contig1:7990775..7991612 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7990776..7991612 + |
| 1622815361.4376824-CDS-S-ischiensis_contig1:7992254..7992455 | 1622815361.4376824-CDS-S-ischiensis_contig1:7992254..7992455 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7992255..7992455 + |
| 1695739660.052543-CDS-S-ischiensis_contig1:7992254..7992455 | 1695739660.052543-CDS-S-ischiensis_contig1:7992254..7992455 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7992255..7992455 + |
| 1622815361.4513412-CDS-S-ischiensis_contig1:7993355..7993832 | 1622815361.4513412-CDS-S-ischiensis_contig1:7993355..7993832 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7993356..7993832 + |
| 1695739660.0651476-CDS-S-ischiensis_contig1:7993355..7993832 | 1695739660.0651476-CDS-S-ischiensis_contig1:7993355..7993832 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7993356..7993832 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1184.1 >prot_S-ischiensis_contig1.1184.1 ID=prot_S-ischiensis_contig1.1184.1|Name=mRNA_S-ischiensis_contig1.1184.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=505bp
MAPKRKKGAKPGQRDLGQLSLNSFFGGGAQPAQAAPPSKAAAQRGPEVQH ANSKSEAGSEVEFVGTSAPGFVRASSLAAGNRAAAGPDPKAIAPGGFVRA SSLPSASASGERVVAASKQAHHGSSIDLRVRVVRFRGEDGDGAAGRAPAA TGWGRAALALEREPTNEHDHNAIKVLLVRESGAAGGPATVGEFFGYVPAR VARFLAPLIDQRAVRASAAAEAEAGAAAVTEEEEGKKRKGSGGDGDEVSM NFLPAVLVLSVEDWATRATRGDIPELLTELRNEARKQDKRANKEARAERV KAARLRSQQRTLDFNFGRGGGAGGLAPPSAEAAAVLGKTPDTVLQQIFSS PGLAAHDIYGPVRAVCRKWRDVADGLPCASARKQVAMACAGVRRRTGAGA GKGQGGDGKTGGARARAGRDDPGPRPPTTWWGEALAELRRHQGFSECRAS EVLSRLEKVAEDCAPPKADGGRHLAEEEGQDGERRRRADHLAAVRDMVQA WGFGS back to topmRNA from alignment at S-ischiensis_contig1:7990735..7993832+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1184.1 ID=mRNA_S-ischiensis_contig1.1184.1|Name=mRNA_S-ischiensis_contig1.1184.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3098bp|location=Sequence derived from alignment at S-ischiensis_contig1:7990735..7993832+ (Schizocladia ischiensis KU_0333) GGGGGAGGGCAAGGCGAAGTAGGCGGGGCTCCAAGTGAAAGATGGCACCC
AAACGCAAGAAAGGAGCCAAACCTGGTCAGCGTGATCTGGGCCAGCTCTC
CCTGAATTCATTTTTCGGCGGAGGGGCCCAGCCTGCCCAGGCCGCCCCGC
CTTCGAAGGCAGCTGCTCAGCGGGGACCCGAAGTCCAGCATGCCAATTCA
AAATCGGAGGCCGGCTCCGAAGTTGAGTTTGTAGGTACCAGCGCACCCGG
GTTCGTTCGGGCCAGCTCGCTAGCTGCCGGGAATAGGGCGGCGGCAGGGC
CCGATCCCAAGGCCATAGCACCCGGGGGGTTCGTTCGAGCCAGCTCCCTA
CCTTCTGCCAGTGCCAGTGGGGAAAGAGTGGTGGCAGCCTCCAAACAAGC
TCACCATGGGAGCTCGATCGATCTGCGGGTCAGGGTGGTGCGTTTCCGGG
GAGAGGATGGTGACGGGGCTGCCGGCCGGGCGCCGGCCGCCACCGGTTGG
GGGAGGGCGGCCCTGGCACTGGAGCGGGAGCCCACGAACGAGCACGACCA
CAACGCCATCAAGGTGCTACTGGTGCGTGAGTCCGGAGCAGCAGGCGGGC
CCGCTACAGTGGGGGAGTTTTTCGGCTACGTTCCGGCCCGTGTGGCCCGC
TTCCTTGCGCCCCTCATTGACCAACGCGCTGTCCGCGCAAGCGCGGCAGC
GGAGGCCGAGGCCGGGGCGGCGGCGGTGACGGAGGAGGAGGAGGGCAAGA
AGAGAAAAGGCAGCGGCGGGGACGGGGACGAGGTCTCAATGAACTTTCTG
CCAGCCGTGCTTGTGCTGTCCGTGGAGGACTGGGCGACCAGGGCTACCCG
AGGGGACATTCCTGAGCTCCTGACAGAGGTGGGGCAAACTGCCAAGGCGT
GGAGATGTGGATGGCGGCTTCCCCTCGCCAATGCCTGCCAACCGCGTTGC
TGGCTGGTGGGGGGGTTGTCGTTCATGCGCGGTGTCGTTTACCTTGCTGC
AGGTTGGGCGGCGTTGTGACGGGCCAGGCAACTGGCCGCCCCCTGGCCGG
GAAAGGCCAGCGGGCACCCACAGGCCGCCCCCTGGCCGCCTGGTCGTCAG
GCGACACCCTCGCTCTGTATTTCTTACTTCAAGCACAGTTAAACCTCACG
TGGCCTACCATAGTTGTATGTAACACACACTACATGTACTGCGCGGCCCG
GGCCCACTGGCCCCTCATCCGGGCCTGCCTGAAGTACTGCAGCACGCAGT
ACTGCCCATGTGCGTTAGGTACTACATTACAGTACTGCACTACAGTACTA
CTGTAGTGGCATCATTAGCCCGCGGTTTGAATCATGTACTCGTACTAGTA
GTATACTTCCCGGCCCGCACGTGTGTGGTGTTGCTGCCTCCACAGCCTCC
GCGGCAGGTTCCGCGCACCGCCCGCCTGGCAGGCATATGCCTCGGACGCG
CATTGCTCATTCGCCCTCCCCCCCCCCACCCAAAACCCCTTCCCGACTTG
CTCACCCGGGGGGCGCACAGCTACGCAACGAGGCCCGCAAGCAGGACAAA
CGGGCCAACAAGGAGGCGAGGGCGGAGCGTGTCAAGGCAGCACGCCTGCG
GTCGCAGCAGCGAACGCTGGACTTCAACTTTGGCAGGGGGGGTGGGGCGG
GTGGCCTGGCGCCACCTTCCGCTGAGGCGGCCGCTGTGCTGGGGAAGACG
CCGGACACGGTGCTTCAGCAGGTGGGGCCGCGGGGTAGATGGAGGGGGAA
GGGGGCCGGGAAAAGACCGCGCGTGGTGATTATGTCGCATGTCTTGTGTG
TTAGGTTACGGGTGATACAATAGTGTCTTGTGTTGCTGCAGCCTCGGTTA
GGGGCTGTGGAGCAAGTGCTGTTCGGGGGCTGGGGACGGCGCACAGGGGT
GAAGGTGTCTGTCTGTCTGAAGGTGTCTGTCTGTCAGTCTGTCCTCTTCG
GTGCCCTCCCGTGTCCGTTGACGTGCTGTTGCCTCGGGAGGCCAAGTGCA
TACTTCAAAGTGCTTATGTTTTCCTCCCCGGCTGTGATTTCCGTCCCGTG
CAAAGGGCAGAGTTGCGCCTGAACTGAGATTGCTGCAAGTTTGTTTGGTT
TTGCTGGTCTACGACTGCAAATTTTCGACATAATTGCAGTGCTTTCTTTT
TTGTGTGGGGGGTTACCTCTGGGACAGGTACGCCTCAACCTTGCCGTTTA
CAGCAGGAATCACAGAGAAGAACGTTATCCAAGTTGAGAATTCTTCATTT
GAAGAACAAGGTCCGGGAAACAGGACGTAACTACTGTAGCACTACAGTTT
GTGACATACTTTGTTACTTGCCTACGTCGACGTACCTATTGTGGTGTTGA
GGAGGATACCGCTGGACGGGATGGCCCCTCTAGAGTATTCAGTAACCCTG
TTTGCAAGTGGGTGGCACACACAGCTCCCAACTCAGAAGTGAGCTCGCGG
TTAATCATCTCTGCGCTGCAGCAAACTCCGTGTGATGCGAGTGCATGCAT
ACTTCCACGTGCAAGAAGTATAGTATAGTACAAGTACTTGCCAGAACAAG
CTGCACACCAACCTATGGACTCTATGTGCCTATGCCCCTGCCGCGTGTGT
TTACTGGCGGCCGACCCGCAGATCTTCTCGAGTCCCGGCCTGGCCGCACA
CGACATCTACGGGCCCGTGCGGGCCGTGTGCCGCAAGTGGAGAGACGTCG
CGGACGGCCTGCCCTGTGCATCTGCCCGCAAGCAAGTGGCCATGGCTTGC
GCTGGGGTCCGCCGCCGCACCGGCGCCGGCGCTGGCAAGGGCCAAGGCGG
CGACGGCAAGACGGGCGGAGCGCGCGCCCGTGCCGGGAGAGATGATCCGG
GGCCGCGGCCGCCCACCACCTGGTGGGGGGAGGCCTTGGCGGAGCTCCGC
AGACACCAAGGATTCTCCGAGTGCCGGGCGAGCGAGGTACTGTCCAGGCT
GGAGAAAGTGGCGGAAGACTGTGCCCCGCCAAAGGCCGACGGCGGCCGTC
ATCTCGCCGAAGAGGAGGGGCAAGATGGGGAGCGGCGGCGCCGGGCGGAC
CACCTGGCCGCGGTCCGGGACATGGTCCAAGCCTGGGGGTTCGGGAGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7990735..7993832+ >mRNA_S-ischiensis_contig1.1184.1 ID=mRNA_S-ischiensis_contig1.1184.1|Name=mRNA_S-ischiensis_contig1.1184.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3030bp|location=Sequence derived from alignment at S-ischiensis_contig1:7990735..7993832+ (Schizocladia ischiensis KU_0333) ATGGCACCCAAACGCAAGAAAGGAGCCAAACCTGGTCAGCGTGATCTGGG CCAGCTCTCCCTGAATTCATTTTTCGGCGGAGGGGCCCAGCCTGCCCAGG CCGCCCCGCCTTCGAAGGCAGCTGCTCAGCGGGGACCCGAAGTCCAGCAT GCCAATTCAAAATCGGAGGCCGGCTCCGAAGTTGAGTTTGTAGGTACCAG CGCACCCGGGTTCGTTCGGGCCAGCTCGCTAGCTGCCGGGAATAGGGCGG CGGCAGGGCCCGATCCCAAGGCCATAGCACCCGGGGGGTTCGTTCGAGCC AGCTCCCTACCTTCTGCCAGTGCCAGTGGGGAAAGAGTGGTGGCAGCCTC CAAACAAGCTCACCATGGGAGCTCGATCGATCTGCGGGTCAGGGTGGTGC GTTTCCGGGGAGAGGATGGTGACGGGGCTGCCGGCCGGGCGCCGGCCGCC ACCGGTTGGGGGAGGGCGGCCCTGGCACTGGAGCGGGAGCCCACGAACGA GCACGACCACAACGCCATCAAGGTGCTACTGGTGCGTGAGTCCGGAGCAG CAGGCGGGCCCGCTACAGTGGGGGAGTTTTTCGGCTACGTTCCGGCCCGT GTGGCCCGCTTCCTTGCGCCCCTCATTGACCAACGCGCTGTCCGCGCAAG CGCGGCAGCGGAGGCCGAGGCCGGGGCGGCGGCGGTGACGGAGGAGGAGG AGGGCAAGAAGAGAAAAGGCAGCGGCGGGGACGGGGACGAGGTCTCAATG AACTTTCTGCCAGCCGTGCTTGTGCTGTCCGTGGAGGACTGGGCGACCAG GGCTACCCGAGGGGACATTCCTGAGCTCCTGACAGAGATGGCACCCAAAC GCAAGAAAGGAGCCAAACCTGGTCAGCGTGATCTGGGCCAGCTCTCCCTG AATTCATTTTTCGGCGGAGGGGCCCAGCCTGCCCAGGCCGCCCCGCCTTC GAAGGCAGCTGCTCAGCGGGGACCCGAAGTCCAGCATGCCAATTCAAAAT CGGAGGCCGGCTCCGAAGTTGAGTTTGTAGGTACCAGCGCACCCGGGTTC GTTCGGGCCAGCTCGCTAGCTGCCGGGAATAGGGCGGCGGCAGGGCCCGA TCCCAAGGCCATAGCACCCGGGGGGTTCGTTCGAGCCAGCTCCCTACCTT CTGCCAGTGCCAGTGGGGAAAGAGTGGTGGCAGCCTCCAAACAAGCTCAC CATGGGAGCTCGATCGATCTGCGGGTCAGGGTGGTGCGTTTCCGGGGAGA GGATGGTGACGGGGCTGCCGGCCGGGCGCCGGCCGCCACCGGTTGGGGGA GGGCGGCCCTGGCACTGGAGCGGGAGCCCACGAACGAGCACGACCACAAC GCCATCAAGGTGCTACTGGTGCGTGAGTCCGGAGCAGCAGGCGGGCCCGC TACAGTGGGGGAGTTTTTCGGCTACGTTCCGGCCCGTGTGGCCCGCTTCC TTGCGCCCCTCATTGACCAACGCGCTGTCCGCGCAAGCGCGGCAGCGGAG GCCGAGGCCGGGGCGGCGGCGGTGACGGAGGAGGAGGAGGGCAAGAAGAG AAAAGGCAGCGGCGGGGACGGGGACGAGGTCTCAATGAACTTTCTGCCAG CCGTGCTTGTGCTGTCCGTGGAGGACTGGGCGACCAGGGCTACCCGAGGG GACATTCCTGAGCTCCTGACAGAGCTACGCAACGAGGCCCGCAAGCAGGA CAAACGGGCCAACAAGGAGGCGAGGGCGGAGCGTGTCAAGGCAGCACGCC TGCGGTCGCAGCAGCGAACGCTGGACTTCAACTTTGGCAGGGGGGGTGGG GCGGGTGGCCTGGCGCCACCTTCCGCTGAGGCGGCCGCTGTGCTGGGGAA GACGCCGGACACGGTGCTTCAGCAGCTACGCAACGAGGCCCGCAAGCAGG ACAAACGGGCCAACAAGGAGGCGAGGGCGGAGCGTGTCAAGGCAGCACGC CTGCGGTCGCAGCAGCGAACGCTGGACTTCAACTTTGGCAGGGGGGGTGG GGCGGGTGGCCTGGCGCCACCTTCCGCTGAGGCGGCCGCTGTGCTGGGGA AGACGCCGGACACGGTGCTTCAGCAGATCTTCTCGAGTCCCGGCCTGGCC GCACACGACATCTACGGGCCCGTGCGGGCCGTGTGCCGCAAGTGGAGAGA CGTCGCGGACGGCCTGCCCTGTGCATCTGCCCGCAAGCAAGTGGCCATGG CTTGCGCTGGGGTCCGCCGCCGCACCGGCGCCGGCGCTGGCAAGGGCCAA GGCGGCGACGGCAAGACGGGCGGAGCGCGCGCCCGTGCCGGGAGAGATGA TCCGGGGCCGCGGCCGCCCACCACCTGGTGGGGGGAGGCCTTGGCGGAGC TCCGCAGACACCAAGGATTCTCCGAGTGCCGGGCGAGCGAGGTACTGTCC AGGCTGGAGAAAGTGGCGGAAGACTGTGCCCCGCCAAAGGCCGACGGCGG CCGTCATCTCGCCGAAGAGGAGGGGCAAGATGGGGAGCGGCGGCGCCGGG CGGACCACCTGGCCGCGGTCCGGGACATGGTCCAAGCCTGGGGGTTCGGG AGCATCTTCTCGAGTCCCGGCCTGGCCGCACACGACATCTACGGGCCCGT GCGGGCCGTGTGCCGCAAGTGGAGAGACGTCGCGGACGGCCTGCCCTGTG CATCTGCCCGCAAGCAAGTGGCCATGGCTTGCGCTGGGGTCCGCCGCCGC ACCGGCGCCGGCGCTGGCAAGGGCCAAGGCGGCGACGGCAAGACGGGCGG AGCGCGCGCCCGTGCCGGGAGAGATGATCCGGGGCCGCGGCCGCCCACCA CCTGGTGGGGGGAGGCCTTGGCGGAGCTCCGCAGACACCAAGGATTCTCC GAGTGCCGGGCGAGCGAGGTACTGTCCAGGCTGGAGAAAGTGGCGGAAGA CTGTGCCCCGCCAAAGGCCGACGGCGGCCGTCATCTCGCCGAAGAGGAGG GGCAAGATGGGGAGCGGCGGCGCCGGGCGGACCACCTGGCCGCGGTCCGG GACATGGTCCAAGCCTGGGGGTTCGGGAGC back to top
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