mRNA_S-ischiensis_contig1.1158.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: UPI001ED8787A (probable cytosolic iron-sulfur protein assembly protein Ciao1 isoform X2 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8787A) HSP 1 Score: 83.2 bits (204), Expect = 1.840e-13 Identity = 79/307 (25.73%), Postives = 116/307 (37.79%), Query Frame = 1
Query: 385 HGSAAYWVCFSKGGKYMATCGHDRTAVLWHIRSPTRTFTRLAEHKEAVTQCCFSPDEKYLLCASGMDLKIYWCESGILRHSIRGHDDTITGVDWSPDQQVFASCSHDAHVRFWGFHRALKMGKSSGTESLMADLFNRKCRHEEQVYRVVFAHKGPSALTCSKDKTVKLW----------NGSREHVMDFTGHEGPVLGVAWSSDDSRFASCSQDSTVNVYRPEDPAP-----LFRLRGHEGVVYAVAWCPVSTARRG---RLVSCGQDQQLIFWDYRKGRVRRRL---PSGAPQGWTMC-VTFHPGG 1239
H + V ++ G +A+CG D+T LW SP+ + G L + C S + + H TI + WSP AS S D+ W + L G+ + E + A L HE +V V +A G TCS+D++V +W NG E H V VAW + AS S D TV +Y E+P+ + L H V+ +AW + R RL +C D + W + P G P +C ++ H GG
Sbjct: 13 HQGRVWNVAWNPQGDILASCGEDKTIRLW-TNSPS---------------------------SQGDKLGNWTCRSTL----VDAHQRTIRAIAWSPCGHRLASASFDSTTAIWERRQQLNTGRGADFECV-ATLEG----HESEVKSVSWARSGRLLATCSRDRSVWIWEVENGENEELNGEFECAAVLNSHTQDVKRVAWHPERELLASASYDDTVRLYM-ENPSDGEWGEVAVLSSHSSTVWGLAWESNVSERASKGTRLATCSGDGTVKIWQEFGPNNEEGVAPGPDGHPAWKCICTLSGHHGG 281
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: A0A498J896_MALDO (LisH domain-containing protein n=5 Tax=Malus TaxID=3749 RepID=A0A498J896_MALDO) HSP 1 Score: 84.3 bits (207), Expect = 3.330e-13 Identity = 56/231 (24.24%), Postives = 109/231 (47.19%), Query Frame = 1
Query: 412 FSKGGKYMATCGHDRTAVLWHIRSPTRTFTRLAEHKEAVTQCCFSPDEKYLLCASGMDLKIYWCESGILRHSIR---GHDDTITGVDWSPDQQ-VFASCSHDAHVRFWGFHRAL----------------KMGK--SSGTESLMA--DLFNRKCRHEEQ-----VYRVVFAHKGPSALTCSKDKTVKLWNGSREHVMDFTGHEGPVLGVAWSSDDSRFASCSQDSTVNVYR 1017
FS GK++A+ GHD+ AVLW+ + + + L EH +T FSP L S D + ++ +S+R GH ++ +D+ P++ + SC D +R+W + ++G+ ++ E++++ D+ + CRH Q ++ V + G + S+D +++LWN + M + H+G + ++ S+ AS S D V +++
Sbjct: 639 FSSDGKFLASGGHDKKAVLWYTDT-LKPKSTLEEHSALITDVRFSPSMPRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDSDGQIRYWSINNGSCSSVFKGGTAQMRFQPRLGRLLAAAAENVVSILDVETQTCRHSLQGHTKPIHSVCWDPSGEFLASVSEDSSLELWNMTENKTMTLSAHDGLIAALSVSTGTGLVASASHDKFVKLWK 867
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: A0A1J4KCT5_9EUKA (Transducin n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KCT5_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 3.660e-13 Identity = 63/243 (25.93%), Postives = 96/243 (39.51%), Query Frame = 1
Query: 385 HGSAAYWVCFSKGGKYMATCGHDRTAVLWHIRSPTRTFTRLAEHK-------EAVTQCCFSPDEKYLLCASGMDLKIYWCESGILRHSIRGHDDTITGVDWSPDQQVFASCSHDAHVRFWGFHRALKMGKSSGTESLMADLFNRKCRHEEQVYRVVFAHKGPSALTCSKDKTVKLWNGSR-EHVMDFTGHEGPVLGVAWSSDDSRFASCSQDSTVNVYRPEDPAPLFRLRGHEGVVYAVAWCP 1089
H S + C+S G+ +AT D A++W I+ + +H + + +G L S+ H + I + +SPD Q + S D V W K G+ T S HE++V + + + TCS D V + + + + TGH G V + W + ASCS D+TV V+RP D A L+GH VYA+ W P
Sbjct: 130 HYSDVFCGCWSPDGRLLATGSADAQAIIWEIQDNQYSSHLTLDHAVKNERMGKDIATLAXXXXXXXXXXXXXXXXXXXXTSNGELLFSLNKHREPIFALQFSPDGQYLLTGSSDFRVIMWN----TKTGEHVNTFS----------HHEQRVLDIDW-YDNRIFATCSGDSKVCICVIDQPKPIFTLTGHTGEVNKICWDTSRKMLASCSDDTTVRVFRPFDRAAPIVLQGHTQYVYAIKWAP 357
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: A0A068R5S0_9GAMM (Putative WD-repeat family protein n=1 Tax=Xenorhabdus poinarii G6 TaxID=1354304 RepID=A0A068R5S0_9GAMM) HSP 1 Score: 83.6 bits (205), Expect = 3.780e-13 Identity = 67/273 (24.54%), Postives = 113/273 (41.39%), Query Frame = 1
Query: 427 KYMATCGHDRTAVLWHIRSPTRTFTRLAEHKEAVTQCCFSPDEKYLLCASG-MDLKIYWCESGILRHSIRGHDDTITGVDWSPDQQVFASCSHDAHVRFWGFH-RALKMGKSSGTESLMADLFNRKCRHEEQVYRVVFAHKGPSALTCSKDKTVKLWN---GSREHVMDFTGHEGPVLGVAWSSDDSRFASCSQDSTVNVYRPEDPAPLFRLRGHEGVVYAVAWCPVSTARRGRLVSCGQDQQLIFWDYRKGRVRRRLPSGAPQ-GWTMCVTF 1227
+Y+AT G+D + +LW+ T H QC FS D KYL+ +S +I+ L+ + GH D + +SPD ++ A+CS D +R + +LK+ HE + + ++ G S ++ S D T++ W+ G + +DF G E +A S D FA D + + E+ ++ H+ V V W +L+S D+ I W G + ++ + P W TF
Sbjct: 16 QYIATAGYDNSIILWNALDGTPI--NKVNHDHLANQCSFSTDGKYLVSSSSDYSARIWVLPELRLKTVLYGHMDDVEMSQFSPDNKLVATCSRDKTIRVFDLEGNSLKVMHG----------------HEADIISISWSACGTSLISSSDDGTIRTWDVQQGKQVDCIDFGGVETDT--IALSCDGKIFAG-DDDGRLTIIEGENTT---QINAHKAGVKRVVW----DESNQKLISLSYDRSAIIWQLIDGTLVKQSQTALPSIVWPRSCTF 260
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: A0A087GP77_ARAAL (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087GP77_ARAAL) HSP 1 Score: 83.2 bits (204), Expect = 4.640e-13 Identity = 78/322 (24.22%), Postives = 138/322 (42.86%), Query Frame = 1
Query: 382 AHGSAAYWVCFSKGGKYMATCGHDRTAVLWHIRSPTRTFTR--LAEHKEAVTQCCFSPDE-KYLLCASGMDLKIYWCESGILRHSIRGHDD---TITGVDWSPDQQVFASCSHDAHVRFWGFHRALKMGKSSGTESLMADLFNRKCRHEEQVYRVV---FAHKGPSALTCSKDKTVKLWNGSREHVMDFTGHEGPVLGVAWSSDDSRFASCSQDSTVNVY--RPEDPAPLFRLRGHEGVVYAVAWCPVSTARRGRLVSCGQDQQLIFWDYRKGRVRRRLPSGAPQGWTM---CVTFHPGGVKLATCSTESDVSALIWGRYAP 1305
AH + ++V FS GKY+AT D TA++W + + + L H+ V+ +SPD+ K L C + LK++ ++G+LRH+ G+D+ T++ W PD S D R + M + G E K ++ +VV G S +T DK +++ N + V E P+ ++ S++ F ++++ E PL + GH+ Y + C + S ++ Q+ W+ +K + P G +M CV+++P ++ S D + IWG P
Sbjct: 223 AHKNEVWFVQFSNNGKYLATASSDCTAIIWKVLDDNKLELKHTLQSHQNPVSFVSWSPDDNKLLTCGNAEVLKLWDVDTGVLRHTF-GNDNNGFTVSSCAWFPDSTRLVCGSSDPE-------RGIVMWDTDGNEI--------KAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETK-VERVIPEEQPITSLSISANGKFFIVNLSSQEIHLWDLAGEWKQPL-KFSGHKQSKYVIRSC-FGGLDSSFIASGSENSQVYIWNLKKAK-----PLEVLSGHSMTVNCVSWNPRNPRMLA-SASDDQTIRIWGPAKP 519
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: A3LYT2_PICST (Uncharacterized protein n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3LYT2_PICST) HSP 1 Score: 81.6 bits (200), Expect = 2.160e-12 Identity = 71/263 (27.00%), Postives = 110/263 (41.83%), Query Frame = 1
Query: 433 MATCGHDRTAVLWHIRSPTRTFTRLAEHKEAVTQCCFSPDEKYL-------------LCASG-MDLKIYWCESGIL---------RHSIRGHDDTITGVDWSPDQQVFASCSHDAHVRFWGFHRALKMGKSSGTESLMADLFNRKCRHEEQVYRVVFAHKGPSALTCSKDKTVKLWNGSREHVMDFTGHEGPVLGVAWSSDDSRFASCSQDSTVNVYRPEDPAPLFRLRGHEGVVYAVAWCPVSTARRGRLVSCGQDQQLIFW 1152
+ TC D T +W S ++ +++ E + SP+ ++ L ASG D IY E + ++ + GH + +++ +Q + S S D + W L + DL HE V+ V + LTCS DK+++LWNG +E V F+GH + + D SRFAS S D TV ++ + L L GHE VY + P G LVS G+D+ + W
Sbjct: 27 VVTCSRDSTTRIWLPPSDSKQSRFVSDRTEPLI-VFHSPNNSFINSVTYIDSKQHEPLIASGSQDAIIYLSEVAVSDRKPGDDTGKYQLIGHAGNVCALEYKNNQII--SGSWDCTAKVWDLDTLL----------VKYDLVG----HESSVWDVKILDND-TFLTCSADKSIRLWNGKKE-VQRFSGHTDVIRKLLVFPDGSRFASASNDGTVKLWDLKSGRVLQTLHGHESFVYDLTLLP-----NGDLVSVGEDRTIRVW 265
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: A0A498HRD5_MALDO (LisH domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498HRD5_MALDO) HSP 1 Score: 81.3 bits (199), Expect = 3.590e-12 Identity = 55/229 (24.02%), Postives = 108/229 (47.16%), Query Frame = 1
Query: 412 FSKGGKYMATCGHDRTAVLWHIRSPTRTFTRLAEHKEAVTQCCFSPDEKYLLCASGMDLKIYWCESGILRHSIR---GHDDTITGVDWSPDQQ-VFASCSHDAHVRFWGFHRAL----------------KMGK--SSGTESLMA--DLFNRKCRHEEQ-----VYRVVFAHKGPSALTCSKDKTVKLWNGSREHVMDFTGHEGPVLGVAWSSDDSRFASCSQDSTVNV 1011
FS GK++A+ GHD+ AVLW+ + + + L EH +T FSP + S D + ++ +S+R GH ++ +D+ P++ + SC D +R+W ++ ++G+ ++ E++++ D+ + CRH Q ++ V + G + S+D +++LWN + M + H+G + ++ S+ AS S D +V
Sbjct: 650 FSSDGKFLASGGHDKKAVLWYTDT-LKLKSTLEEHSALITDVRFSPSMPRVA-TSSFDKTVRVWDADNPDYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGQIRYWSINKGSCSCVSKGGTAQMRFQPRLGRFLAAAAENVVSILDVETQTCRHSLQGHTKPIHSVCWDPSGEFLASVSEDSSLELWNMTENKTMTLSAHDGLIAALSVSTVTGLVASASHDKFTDV 876
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: UPI001E5CF6E8 (WD40 repeat domain-containing protein n=1 Tax=Paraneptunicella aestuarii TaxID=2831148 RepID=UPI001E5CF6E8) HSP 1 Score: 80.5 bits (197), Expect = 3.620e-12 Identity = 68/267 (25.47%), Postives = 112/267 (41.95%), Query Frame = 1
Query: 415 SKGGKYMATCGHDRTAVLWHIRSPTRTFTRLAEHKEAVTQCCFSPDEKYLLCASG-MDLKIYWCESGILRHSIRGHDDTITGVDWSPDQQVFASCSHDAHVRFWGFHRALKMGKSSGTESLMADLFNRKCRHEEQVYRVVFAHKGPSALTCSKDKTVKLWNGSREHVM---DFTGHEGPVLGVAWSSDDSRFASCSQDSTVNVYRPEDPAPLFRLRGHEGVVYAVAWCPVSTARRGRLVSCGQDQQLIFWDYR-KGRVRRRLPSGAP 1200
S G +Y+AT G+D +LW + T+ H QC F PD KYL S ++I+ S L H + H D + V ++P A+CS D +R + G L+ HE V V + G ++ S D T++ WN + ++ DF G E + V SSD + FA + + +++ + + F+ H+ + + + S RLVS D+ + W K ++ +L S P
Sbjct: 13 SLGDQYVATAGYDNKVILWDAK--TKHALAQGVHDHLANQCVFRPDGKYLASTSSDYSVRIWQLPSMRLTHLLNEHTDDVEFVCFNPVNDSIATCSRDKSIRIYD-------GSGKQQRVLLG--------HEADVLTVQWMADGEQLVSTSDDGTIRTWNANTGEMLAMYDFEGVETDTIVV--SSDGAIFAG-NDEGEISLLQGGELQQTFQA--HDAGIKRLVYSETSK----RLVSLSYDRTVKIWQLDDKQQLNLKLDSKLP 253
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: UPI000B79586A (transcriptional corepressor LEUNIG-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B79586A) HSP 1 Score: 78.2 bits (191), Expect = 5.780e-12 Identity = 58/203 (28.57%), Postives = 85/203 (41.87%), Query Frame = 1
Query: 412 FSKGGKYMATCGHDRTAVLWHIRS--PTRTFTRLAEHKEAVTQCCFSPDEKYLLCASGMDLKIYWCESGILR---HSIRGHDDTITGVDWSPDQQ-VFASCSHDAHVRFWGFHRALKMGKSSGTESLMADLFNRKCRHEEQVYRVVFAHKGPSALTCSKDKTVKLWNGSREHVMDFT-GHEGPVLGVAWSSDDSRFASCSQDS 999
FS GK++AT GHD+ AVLW+ P TF H +T CFSP YL S D I ++G R H RGH VD+ P++ + SC + +R+W T+S A +F H + F + L ++D V + + + D GH P+ + W AS S+D+
Sbjct: 60 FSADGKWLATAGHDKKAVLWYADGLKPKSTFEG---HTSLITDVCFSPSMPYLA-TSSFDKTIRVWDAGNPRDSLHIFRGHSTCAVSVDFHPNRNDLICSCDGNGEIRYWSI-----------TDSNCAGVFKGGTSH------IKFQPRLGRYLAAAEDNAVSILDVETQARQDLLQGHVKPIQFLCWDPSGEYIASVSEDA 241
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Match: A0A498HNY4_MALDO (GGACT domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498HNY4_MALDO) HSP 1 Score: 79.7 bits (195), Expect = 7.520e-12 Identity = 56/213 (26.29%), Postives = 100/213 (46.95%), Query Frame = 1
Query: 412 FSKGGKYMATCGHDRTAVLWHIRSPTRTFTRLAEHKEAVTQCCFSPDEKYLLCASGMDLKIYWCESGILRHSIR---GHDDTITGVDWSPDQQ-VFASCSHDAHVRFWGFHRAL----------------KMGK--SSGTESLMA--DLFNRKCR-----HEEQVYRVVFAHKGPSALTCSKDKTVKLWNGSREHVMDFTGHEGPVLGVAWSS 963
FS GK++A+ GHD+ AVLW+ + T L EH +T FSP K L S D I ++ +S+R GH ++ +D+ P++ + SC D +R+W + ++GK ++ E++++ D+ + C+ H + ++ V + G + S+D T++LWN + M HEG + +A S+
Sbjct: 63 FSSDGKFLASGGHDKRAVLWYTDTLKLKCT-LQEHSALITDVRFSPS-KPCLATSSFDKTIRVWDADNPSYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGQIRYWSINNGCCSCVSKGGTAQIRFQPRLGKFLAAAAENVVSILDVETQTCQYSLQGHTKPIHSVCWDPSGEFLASVSEDSTLELWNMTENKTMTLPAHEGLIDSLAVST 273 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1158.1 >prot_S-ischiensis_contig1.1158.1 ID=prot_S-ischiensis_contig1.1158.1|Name=mRNA_S-ischiensis_contig1.1158.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=426bp MLSKATALAKHTLGGGRHKKRPAPTGAKYGLGEDSDDDDVDKKPALKKEDback to top mRNA from alignment at S-ischiensis_contig1:7846164..7850029+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1158.1 ID=mRNA_S-ischiensis_contig1.1158.1|Name=mRNA_S-ischiensis_contig1.1158.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3866bp|location=Sequence derived from alignment at S-ischiensis_contig1:7846164..7850029+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7846164..7850029+ >mRNA_S-ischiensis_contig1.1158.1 ID=mRNA_S-ischiensis_contig1.1158.1|Name=mRNA_S-ischiensis_contig1.1158.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2556bp|location=Sequence derived from alignment at S-ischiensis_contig1:7846164..7850029+ (Schizocladia ischiensis KU_0333)back to top |