mRNA_S-ischiensis_contig1.114.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A7S3QM41_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QM41_DUNTE) HSP 1 Score: 65.1 bits (157), Expect = 6.960e-8 Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 112 LPGGTWDKALDGGDPAVDQGVLMKAAIR-TSKAAGLDLGGCSTWLKLCEMHHDDRSVVVYLCDGAECKT 315
L GG+WD ALDGGDP D+ L +AA+R K A +DL C WL+ C++H+ S V DG + T
Sbjct: 392 LLGGSWDAALDGGDPERDESALRRAAVRLVQKQANIDLSPCQHWLRFCDIHYQRPSKVSSRPDGHDVVT 460
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A8D0L8T2_SPHPU (Cell cycle and apoptosis regulator 2 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0L8T2_SPHPU) HSP 1 Score: 64.3 bits (155), Expect = 1.560e-7 Identity = 37/77 (48.05%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKA-AGLDLGGCSTWLKLCE---MHHDDRS----VVVYLCDGAEC 309
EAVL GG W ALDG DP VD VL++ AIR +KA GLDL C+ W + E +H D S VV+L D C
Sbjct: 361 EAVLIGGEWSSALDGPDPVVDPMVLVRTAIRCTKAQTGLDLSNCTKWFRFAEFRYLHEGDPSERQQTVVFLPDVWSC 437
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A388KJA8_CHABU (DBC1 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJA8_CHABU) HSP 1 Score: 63.5 bits (153), Expect = 2.800e-7 Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 118 GGTWDKALDGGDPAVDQGVLMKAAIR-TSKAAGLDLGGCSTWLKLCEMHHDDRS----------VVVYLCDGAEC 309
GGTWDK LDGGDP VD VL++ AIR T + +DL C++W++ E+H++ + VVY+ D C
Sbjct: 778 GGTWDKELDGGDPEVDDSVLIRTAIRCTKETIQVDLSECTSWMRFMEVHYERAAEDGGPSHKEITVVYIPDVHRC 852
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: UPI0015A5F7EF (cell cycle and apoptosis regulator protein 2 n=1 Tax=Oxyura jamaicensis TaxID=8884 RepID=UPI0015A5F7EF) HSP 1 Score: 62.8 bits (151), Expect = 4.870e-7 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKA-AGLDLGGCSTWLKLCEMHH---DDRS----VVVYLCDGAEC 309
EAVL GG W +LDG DP D VL++ A+R ++A AGLDL GCS W++ E + D S VVV+L D C
Sbjct: 358 EAVLIGGEWSPSLDGPDPEADPMVLVRTAVRCARAQAGLDLSGCSKWVRFAEFRYLREGDASRREVVVVFLPDVWGC 434
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A8B9EIG9_ANSCY (Cell cycle and apoptosis regulator 2 n=2 Tax=Anser cygnoid TaxID=8845 RepID=A0A8B9EIG9_ANSCY) HSP 1 Score: 61.6 bits (148), Expect = 1.180e-6 Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKA-AGLDLGGCSTWLKLCEMHH---DDRS----VVVYLCDGAEC 309
EAVL GG W +LDG DP D VL++ A+R ++A AGLDL GC+ W++ E + D S VVV+L D C
Sbjct: 474 EAVLIGGEWSPSLDGPDPEADPVVLVRTAVRCTRAQAGLDLSGCTKWVRFAEFRYLREGDASRREVVVVFLPDVWGC 550
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: UPI001C4D1DF4 (cell cycle and apoptosis regulator protein 2 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4D1DF4) HSP 1 Score: 60.8 bits (146), Expect = 2.040e-6 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKAA-GLDLGGCSTWLKLCEMHHDDRSVVVYLCDG 300
EAVL GG W +LDG DPA + VL++ AIR +KA GLDL GC+ W + E YLC+G
Sbjct: 361 EAVLIGGEWSPSLDGPDPATNPMVLIRTAIRCTKAQIGLDLTGCTKWFRFAEFR--------YLCEG 419
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A7L0JME6_CHATO (CCAR2 protein (Fragment) n=2 Tax=Anseriformes TaxID=8826 RepID=A0A7L0JME6_CHATO) HSP 1 Score: 60.5 bits (145), Expect = 2.670e-6 Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKA-AGLDLGGCSTWLKLCEMHH---DDRS----VVVYLCDGAECKTG------SRTPGQKEATSP 354
EAVL GG W +LDG DP D VL++ AIR ++A AGLDL C+ W++ E + D S VVV+L D C S P ++ TSP
Sbjct: 339 EAVLIGGEWSPSLDGPDPEADPMVLVRTAIRCTRAQAGLDLSDCTKWVRFAEFRYLREGDASRREAVVVFLPDVWGCMPSLEEWEASCQPRAEKGTSP 436
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A093HXB0_STRCA (Cell cycle and apoptosis regulator protein 2 (Fragment) n=4 Tax=Palaeognathae TaxID=8783 RepID=A0A093HXB0_STRCA) HSP 1 Score: 60.1 bits (144), Expect = 3.540e-6 Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKA-AGLDLGGCSTWLKLCEMHH---DDRS----VVVYLCDGAEC 309
EAVL GG W +LDG DP D VL++ AIR +KA AGLDL C+ W++ E + D S VVV+L D C
Sbjct: 338 EAVLIGGEWSPSLDGPDPDADPMVLVRTAIRCTKAQAGLDLSNCTKWVRFAEFRYLREGDPSQREVVVVFLPDVWGC 414
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A7K7VSJ8_EUDEL (CCAR2 protein (Fragment) n=1 Tax=Eudromia elegans TaxID=8805 RepID=A0A7K7VSJ8_EUDEL) HSP 1 Score: 59.7 bits (143), Expect = 4.790e-6 Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKA-AGLDLGGCSTWLKLCEMHH-------DDRSVVVYLCDGAEC 309
EA+L GG W +LDG DP D VL++ AIR +KA AGLDL C+ W++ E + VVV+L D C
Sbjct: 335 EAMLIGGEWSPSLDGPDPEADPMVLVRTAIRCTKAQAGLDLSNCTKWVRFAEFRYLREGEPSQREVVVVFLPDVWAC 411
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Match: A0A151P695_ALLMI (Cell cycle and apoptosis regulator protein 2 n=3 Tax=Alligator TaxID=8495 RepID=A0A151P695_ALLMI) HSP 1 Score: 59.7 bits (143), Expect = 4.800e-6 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 103 EAVLPGGTWDKALDGGDPAVDQGVLMKAAIRTSKA-AGLDLGGCSTWLKLCEMHH-------DDRSVVVYLCDGAEC 309
EAVL GG W ++DG DP D VL++ AIR +KA GLDL C+ W++ E + VVV+L D C
Sbjct: 364 EAVLIGGEWVPSMDGSDPDADPMVLVRTAIRCTKAQTGLDLSSCTKWVRFAEFRYLHQGEPAQQEKVVVFLPDVWSC 440 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.114.1 >prot_S-ischiensis_contig1.114.1 ID=prot_S-ischiensis_contig1.114.1|Name=mRNA_S-ischiensis_contig1.114.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=216bp MKAAIRTSKAAGLDLGGCSTWLKLCEMHHDDRSVVVYLCDGAECKTGSRTback to top mRNA from alignment at S-ischiensis_contig1:731232..739091+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.114.1 ID=mRNA_S-ischiensis_contig1.114.1|Name=mRNA_S-ischiensis_contig1.114.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7860bp|location=Sequence derived from alignment at S-ischiensis_contig1:731232..739091+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:731232..739091+ >mRNA_S-ischiensis_contig1.114.1 ID=mRNA_S-ischiensis_contig1.114.1|Name=mRNA_S-ischiensis_contig1.114.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1296bp|location=Sequence derived from alignment at S-ischiensis_contig1:731232..739091+ (Schizocladia ischiensis KU_0333)back to top |