mRNA_S-ischiensis_contig1.1138.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: D8LPR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR0_ECTSI) HSP 1 Score: 386 bits (991), Expect = 4.220e-124 Identity = 195/413 (47.22%), Postives = 277/413 (67.07%), Query Frame = 2
Query: 167 DKHSQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRIT-EGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKSPALSFHVVSPSGTLERTLEIPVPRPVMMHDFATSESHAVFLDLPMIFDNAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEER-EASGEVVKI-SLVLCEFEDF-----DMDTMTHVNLPA-PFIYEIDLRSALVSKRPAV--NLPPGVGMDFPQQRRSLLGQHSRWLYTVANKGLGKIYAVAKIDLDA 1372
DK ++FL+G F PVH+E A EC+V G LP+ + GEF+RNGPNP+FMPKG YHWF+G GMVH VRI G A+Y+ R++RT++L E++AG + M D++ +L + +L++S LK+KLG+ PD + ET NTSL++HAGRL+AL E G+PYALRV+CDGV+ET+GR +++GKL+TPFTAHPK DP TG LY GYQ +P L+ +V+ G +ER + V R MHDFA SE++ VFLD+P++F + KGK P+V++ L AR GVL LDATD S ++WF +PE FH N WEE+ EA+G + +V C+ + D++ T V A P+ ++L ++ ++ V + PP G+DFPQ R+SL+G+ +R+ Y +A G A+ KIDL A
Sbjct: 21 DKDNKFLNGVFAPVHEENT-AEECEVVGTLPEVVCGEFVRNGPNPRFMPKGGYHWFDGLGMVHGVRIKPSGAAFYTNRFIRTKRLQAEEEAGEALGVTMGDLSSKLSVPKLLLSTLKEKLGVLPDFRALRETNANTSLEFHAGRLMALQEAGVPYALRVMCDGVIETLGRTSFEGKLETPFTAHPKKDPATGKLYGFGYQMQGNPFLTMYVLDADGKIERQFPVDVGRATAMHDFAISENYCVFLDVPLVFKGENLLKGKFPLVYDDTLGARMGVLRLDATDASGIQWFDMPECFMTFHVVNAWEEQVEANGTATTVLKVVTCDMFELSLDQNDLNQETTVGQHARPYTTTLNLETSKATRACLVPQSQPPTEGLDFPQIRKSLVGRKNRYGYFIAFDAGGLAAALVKIDLQA 432
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: D8LGA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA2_ECTSI) HSP 1 Score: 374 bits (960), Expect = 3.470e-119 Identity = 201/441 (45.58%), Postives = 272/441 (61.68%), Query Frame = 2
Query: 113 KALVGWMLDLTSWAITWPDKHSQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKS--PALSFHVVSPSGTLERTLEI-PVPRPVMMHDFATSESHAVFLDLPMIFDNAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEER-EASG----------EVVKISLVLCEFEDFDMDTMTHVNL----PAPFIYEIDLR---SALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVANKGLGKIYAVAKIDLDA 1372
K L G + W + WPDK + FL + PV +E A C+V G LP+A++G RNGPNPKF PK YHWF+GDGMVH+VRI GKA YS R+VRT KL E++AG V+ ++ DM +G+ ++++ LK KLG+ PDL LETT NTSL +HAGRL AL EGGLPYALRV+CDGV+ETIG+ +DG+++ PFTAHPK DP TG LYA GYQ S P ++++V+ +G LER I V RP+MMHDFA ++++AVFLD P++F + G++P VF++ +R G+L LDA+D S +RWF +P+ F FH N WEE E +G V+KI C+ + DMD + PF++ + L ++ P GMDFPQ RRSL+G+ +R+ Y G A K+DL A
Sbjct: 3 KVLQG-VFKAVEWVLNWPDKDNLFLSKVYAPVDEETTRA--CEVVGVLPEALNGTVARNGPNPKFKPKAGYHWFDGDGMVHSVRIKAGKATYSNRYVRTEKLRTEEEAGEAVAVKLGDMASLVGIPKMLLYSLKVKLGIIPDLIDALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGKATFDGQMKAPFTAHPKKDPDTGKLYAFGYQFTDSTKPYVTYYVLDKNGKLERQFPIVDVKRPIMMHDFAITKNYAVFLDFPLLFKPELMLTGQIPFVFDETAGSRMGILRLDASDSSEMRWFDMPQAYFAFHVLNAWEETMEQTGGPGGVAPNTSSVIKIHT--CDTKHLDMDFRKAAHGVDQDSLPFLHTVILNLDTGEVIRYSVLPEKPFSEGMDFPQLRRSLVGRKNRFGYCTTFNSKGDAAAELKVDLQA 438
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: D8LGA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA3_ECTSI) HSP 1 Score: 362 bits (929), Expect = 1.230e-114 Identity = 199/438 (45.43%), Postives = 265/438 (60.50%), Query Frame = 2
Query: 149 WAITWPDKHSQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKS--PALSFHVVSPSGTLERTLEIP-VPRPVMMHDFATSESHAVFLDLPMIFDNAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEER-EASG----------EVVKISLVLCEFEDFDMD--TMTH--------------VNLPAPFIYEIDLRSALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVANKGLGKIYAVAKIDLDA 1372
W WPDK + FL + PV +E A C+V G LP+A++G RNGPNPKF PK YHW++GDGMVH+V+I GKA YS R+VRT KL E++AG PV+ DM + + ++++S LK KLG+ PDL LETT NTSL +HAGRL AL EGGLPYALRV+CDGV+ETIG+ +DG+++ PFTAHPK DP TG L+A GYQ + P ++++V+ +G LER I + RP+MMHDFA ++++AVFLD P++F I GK+P+ F++ +R GVL LDA+D S + WF +P+T H N WEE E +G V+KI C+ MD ++H +NL E+ S L S R GMDFPQ RRSL+G+ +R+ Y G A AKIDL A
Sbjct: 14 WIFNWPDKDNLFLSKVYAPVDEETTRA--CEVVGALPEALNGTLARNGPNPKFKPKAGYHWYDGDGMVHSVQIKAGKATYSNRYVRTEKLRAEEEAGEPVAMNFGDMASMVVIPKMLLSSLKVKLGIVPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGQATFDGQMKAPFTAHPKKDPDTGKLHAFGYQFKDNTKPYVTYYVLDTNGKLERQFPIVGIKRPIMMHDFAITKNYAVFLDFPLLFKPELILAGKVPIAFDETAGSRMGVLRLDASDSSEMLWFDMPQTYCALHVLNAWEETMEKTGGPAGIAPTKTSVIKIHT--CDISRLTMDFRKLSHGVDQDELAILHTVTLNLDTG---EVTRESVLPSSRTLSE-----GMDFPQLRRSLVGRKNRFGYCTVMDMKGDAIAEAKIDLQA 439
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: A0A6H5KSQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ0_9PHAE) HSP 1 Score: 354 bits (908), Expect = 1.130e-111 Identity = 194/424 (45.75%), Postives = 262/424 (61.79%), Query Frame = 2
Query: 167 DKHSQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKS--PALSFHVVSPSGTLERTLEIP-VPRPVMMHDFATSESHAVFLDLPMIFDNAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEER-EASG----------EVVKISLVLCEFEDFDMDT------MTHVNLPAPFIYEIDLRSALVSKRPAVNLPPGV--GMDFPQQRRSLLGQHSRWLYTVANKGLGKIYAVAKIDLDA 1372
DK + FL + PV +E A C+V G LP+A++G RNGPNPKF PK YHW++GDGMVH+VRI +GKA YS R+VRT KL E++AG PV+ DM + + ++++S LK KLG+ PDL LETT NTSL +HAGRL AL EGGLPYALRV+CDGV+ETIG+ +DG+++ PFTAHPK DP TG L+A GYQ S P ++++V+ G LER I + RP+MMHDFA ++++AVFLDLP++F I GK+P+ F++ +R GVL LDA+D S + WF +P+T H N WEE E +G V+KI C+ MD + L ++L + V++ + + GMDFPQ RRSL+G+ +R+ Y G A AKIDL A
Sbjct: 32 DKDNLFLSKVYAPVDEETTRA--CEVVGALPEALNGTLARNGPNPKFKPKAGYHWYDGDGMVHSVRIKDGKATYSNRYVRTEKLRTEEEAGEPVAMNFGDMASMVVIPKMLLSSLKVKLGIVPDLDAALETTANTSLDFHAGRLFALCEGGLPYALRVMCDGVIETIGQTTFDGQMKAPFTAHPKKDPDTGKLHAFGYQFKDSNKPYVTYYVLDKDGKLERQFPIVGIKRPIMMHDFAITKNYAVFLDLPLLFKPELILAGKVPIAFDETAGSRMGVLLLDASDSSEMLWFDMPQTYCALHVLNAWEETMEKTGGPGGVAPTKTSVIKIHT--CDISRLTMDFRKLSLGVDQDELAILHTVTLNLDTGEVTRESVLPSSSTLLQGMDFPQIRRSLVGRKNRFGYCTIMDMKGDAIAEAKIDLQA 451
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: A0A2P6VEQ5_9CHLO (Carotenoid cleavage dioxygenase 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VEQ5_9CHLO) HSP 1 Score: 302 bits (774), Expect = 8.850e-92 Identity = 174/441 (39.46%), Postives = 243/441 (55.10%), Query Frame = 2
Query: 113 KALVGWMLDLTSWAITWPDKHSQ-------FLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTG-----RLGLARLIVSM--LKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKSPALSFHVVSPSGTLERTLEIPVPRPVMMHDFATSESHAVFLDLPMIFD-NAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEEREASGEVVKISLVLCEFEDFDMDTMTHVNLPAPFIYE--IDLRSALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVA----NKGLGKIYAVAKIDLDA 1372
KA G L S A+ W D S+ ++ SF PV EV+E VE + G LP+ + G ++R GPNPK P G YHWF+GDGM+HAVRI G+A Y RWV T +L E++AG P++ ++ D G +GL RL +++ L +K GL T NT++ YHAG++LAL+EG LPYALRV C G+VET+GR Y GK+ FTAHPK+DP T L+ GY K+P + + GT+ + +P+PVMMHD A ++ HA+ LD+P+ F+ + +GKLP VF + PAR GVLP A +RWFT E + FH +N WEE + I L LC F +D T P + E + L + + R P G DFP L+G+ +R+ Y ++G+ + V K DL +
Sbjct: 13 KAAAG-ALRAASKAVHWLDSSSKLHPGWDPYMKHSFAPVDKEVLEGVEV-IEGNLPEELEGTYVRTGPNPKLAPMGGYHWFDGDGMIHAVRIAGGRAIYCNRWVETARLEQEERAGFPLAGKIGDYRGFSSLVYMGLNRLAIALGVLSQKHGLG---------TANTAIAYHAGKILALHEGDLPYALRVACSGLVETVGRVTYGGKVTHAFTAHPKLDPETQQLFYFGYDCGKAPHCHYGWLEADGTVAADFPVTIPKPVMMHDMALTQKHALILDMPLEFEPKVMVKEGKLPFVF-ADRPARIGVLPRCARSADDIRWFTA-ERLMSFHVANAWEEGKT------IRLFLCTMNSFSLDEFTAAEGAEPLLTEFRLHLDTGACTVRRFEESPAAYG-DFPVVHPGLVGRRTRYTYVACMESDDRGVPRFVGVTKFDLQS 433
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: E1ZMW5_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZMW5_CHLVA) HSP 1 Score: 301 bits (770), Expect = 3.090e-91 Identity = 167/404 (41.34%), Postives = 232/404 (57.43%), Query Frame = 2
Query: 182 FLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKSPALSFHVVSPSGTLERTLEIPVPRPVMMHDFATSESHAVFLDLPMIFD-NAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEEREASGEVVKISLVLCEFEDFDMDTMTHVNLPAPFIYEI--DLRSALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVA----NKGLGKIYAVAKIDLDA 1372
+L G ++PVH EV V G+LP ++G F+R GPNPK P+G YH F+GDGM+HAVRI GKA Y RWV+T +L+ E+KAG PV+ ++ D G + LA ++ S L + LG+ +G T NT+L YHAGR+LAL+EG LPY LR+ C+G+VET+ R YDGK+ PFTAHPKVD +TG L+ GY + P + + SG + R +P+ P+MMHD A +++H + LD+P++FD + KG+LP F K+ PAR GVLP A +RWF+ E FHT+ WEE I L LC + F +D T P + E+ DL + + R PG DFP L G+ +R+ Y + G+ + K DL A
Sbjct: 43 YLMGHWEPVHTEVHAQDLEVVEGELPADLAGAFVRTGPNPKLTPEGGYHLFDGDGMIHAVRIGGGKAAYCNRWVQTARLAQEEKAGWPVAVKIGDYRGLVSLAYMLASKLARVLGVLSSKEG--LGTANTALAYHAGRVLALHEGDLPYGLRIACNGLVETVERATYDGKITHPFTAHPKVDAQTGELFYFGYSIEQKPHCWYGWLDASGRVVRDFPVPLGEPIMMHDMALTQNHVLLLDVPLVFDPKVMVQKGQLPFEF-KDRPARIGVLPRYAKSADEIRWFST-ERFMCFHTAAAWEEGST------IRLYLCTMKSFSLDNFTASEDAEPHLSEVVLDLEAGTTTYRRLPGARPG---DFPVIPAQLTGRPARYTYVATMEANDTGVPAFIGITKYDLQA 433
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: I0YMZ4_COCSC (Carotenoid oxygenase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMZ4_COCSC) HSP 1 Score: 300 bits (769), Expect = 6.040e-91 Identity = 172/407 (42.26%), Postives = 240/407 (58.97%), Query Frame = 2
Query: 170 KHSQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKSPA-LSFHVVSPSGTLERTLEIPVPRPVMMHDFATSESHAVFLDLPMIF-DNAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEEREASGEVVKISLVLCEFEDFDMDTMTHVNLPAPFIYEI-DLRSALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVANKGL---GKIYAVAKIDLDA 1372
+ ++FL +F PV E + +V GKLP A+ G + R GPNP G+YHWF+GDGMVHA RI +GKA YS R V+T +L E K G PV R DM G G+ +S L+ KLG+ P +G T NT+L YHA +LLAL+EG LPYALR+LC+G+V+T+GR + GK+ PFTAHPKVDP TG L+ IGYQ K PA + + + G L+ + + + VMMHD A ++ +A+ LD+P++F + K +LP+V++K PARFGV+P G V WF LP + FH +N W+E S +V+K L C FEDFD+D ++ NLP F + ++ L + V +FP+ L G +R+ Y G GK +AK+D+ A
Sbjct: 46 RKNKFLADNFAPVSAET-DQQNLKVVGKLPKALDGVYARIGPNPVLPISGDYHWFDGDGMVHACRIKDGKAAYSNRLVQTNRLKRERKLGFPVYQRFGDMRGLWGVFHAGLSQLRLKLGVTPPSEGI--GTANTALVYHANKLLALHEGDLPYALRILCNGIVDTLGRLTFGGKVNHPFTAHPKVDPITGELFFIGYQIDKQPAGVHYAGLDKDGKLQFDVRVDLQEGVMMHDMAITQDYAIVLDVPLVFRPEVMVTKNRLPLVYDKSRPARFGVMPKRPKSGKEVVWFELPAVMI-FHVANAWQE---SKDVIK--LFACCFEDFDLD-LSEDNLPDSFQPRMREMTFNLATGEATTRQLADVICEFPRVPEHLTGLRTRYTYASCMDGAAMAGKFQGIAKLDMGA 442
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: A0A8J9RH61_9CHLO (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RH61_9CHLO) HSP 1 Score: 298 bits (762), Expect = 6.510e-90 Identity = 169/405 (41.73%), Postives = 240/405 (59.26%), Query Frame = 2
Query: 176 SQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKSPALSFHV-VSPSGTLERTLEIPVPRPVMMHDFATSESHAVFLDLPMIF-DNAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEEREASGEVVKISLVLCEFEDFDMDTMTHVNLPAPFIYEI-DLRSALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVANKG---LGKIYAVAKIDLDA 1372
+++L +FKPV E + +V GKLP A+ G + R GPNP G+YHWF+GDGMVHA RI +GK YS R V+T +L E K G PV R DM G G+ +S L+ KLG+ P+ +G T NT+L +HA +LLAL+EG LPYALR+LCDGVV+T+GR + K++ PFTAHPK DP TG L+ IGYQ K PA ++ + G L+ + + + VMMHD A ++ +A+ LD+P++F + K +LP+V++K PARFGVLP G VRWF LP + FH +N W+E S +V+K + C FEDFD+D + +LP + + ++ L + V +FP+ L+G +R+ Y + G GK + K+DL A
Sbjct: 48 NKYLADNFKPVSAETAHQ-DLKVVGKLPKALDGVYARTGPNPVLPITGDYHWFDGDGMVHACRIKDGKVAYSNRLVQTHRLQRELKLGFPVYQRFGDMRGFWGVFHAGLSQLRLKLGITPEKEG--VGTANTALVFHANKLLALHEGDLPYALRILCDGVVDTLGRLTFGNKVRHPFTAHPKPDPVTGELFFIGYQMDKKPACVWYAGLDKEGGLQFDVRVDLKEGVMMHDMAITQDYAILLDVPLVFRPEEMVTKNRLPLVYDKSRPARFGVLPKRPKSGKEVRWFELPPVMI-FHVANAWQE---SKDVIK--MFACCFEDFDLD-IGEEDLPDSYQPRMREMTFNLATGEATSRQLADVICEFPRVPDHLIGLRTRYTYAASMDGSKMAGKFEGIVKLDLSA 442
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: A0A1L5JJ07_CAMSI (Carotenoid cleavage dioxygenase n=21 Tax=asterids TaxID=71274 RepID=A0A1L5JJ07_CAMSI) HSP 1 Score: 292 bits (747), Expect = 1.350e-87 Identity = 171/450 (38.00%), Postives = 253/450 (56.22%), Query Frame = 2
Query: 59 RRSGGSVV*QQVAMASVVKALVGWMLDLTSWAITWPDKHSQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKSPALSFHVVSPSGTLERTLEIPVPRPVMMHDFATSESHAVFLDLPMIFDNAQIPK-GKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEEREASGEVVKISLVLCEFEDFDMDTMTHVNLPAPF--------IYEI--DLRSALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVANKGLGKIYAVAKIDLDAD 1375
R GG VV + + ++ W+ L + + +L G+F PVHDE + + G LP+ ++GEF+R GPNPKF P YHWF+GDGM+H +RI +GKA Y R+VRT +L E+ GG ++ D+ G GL + + ML+ KL + G T NT+L YH G+LLAL+E PYAL+VL DG ++T+G YD +L FTAHPKVDP TG ++ GY + P +++ V+S G + + I +P P+MMHDFA +E++A+F+DLP+ F ++ K KL F+ A FGVLP A D ++WF LP F FH +N WEE + EVV L+ C E+ D+D VN P +YE+ ++++ L S+R ++ P +DFP+ S G+ R++Y + K+ + K DL A+
Sbjct: 11 RMEGGVVVVKPKPNKGLTSTVIDWLEKLIVKLMYDTSQPHHYLAGNFGPVHDETPPCKDLTIQGYLPECLNGEFVRVGPNPKFTPVAGYHWFDGDGMIHGLRIKDGKATYVSRYVRTSRLKQEEFFGGSKFMKIGDLKGFFGLLMVNMQMLRAKLKVLDVSYGT--GTGNTALIYHHGKLLALSEADKPYALKVLEDGDLQTLGMLDYDKRLAHSFTAHPKVDPFTGEMFTFGY-SHTPPYITYRVISKDGFMHDPVPITIPEPIMMHDFAITENYAIFMDLPLFFKPKEMVKENKLIFTFDATKKACFGVLPRYAKDELLIKWFELPNC-FIFHNANAWEEGD---EVV---LITCRLENPDLDM---VNGPVKEKLENFGNELYEMRFNMKTGLASQR-KLSAP---AVDFPRVNESYTGRKQRFVYATTLDSIAKVTGIIKFDLHAE 443
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Match: W1PVR9_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PVR9_AMBTC) HSP 1 Score: 291 bits (745), Expect = 2.140e-87 Identity = 169/428 (39.49%), Postives = 245/428 (57.24%), Query Frame = 2
Query: 113 KALVGWMLD----LTSWAITWPDKHSQFLHGSFKPVHDEVVEAVECQVTGKLPDAISGEFMRNGPNPKFMPKGNYHWFEGDGMVHAVRITEGKAYYSCRWVRTRKLSLEDKAGGPVSFRMSDMTGRLGLARLIVSMLKKKLGLAPDLQGDLETTTNTSLQYHAGRLLALNEGGLPYALRVLCDGVVETIGRFAYDGKLQTPFTAHPKVDPRTGYLYAIGYQAMKSPALSFHVVSPSGTLERTLEIPVPRPVMMHDFATSESHAVFLDLPMIFDNAQIPKGKLPVVFNKELPARFGVLPLDATDGSTVRWFTLPETVFGFHTSNCWEEREASGEVVKISLVLCEFEDFDMDTMTHVNLP--APFIYEI-DLRSALVSKRPAVNLPPGVGMDFPQQRRSLLGQHSRWLYTVANKGLGKIYAVAKIDLDAD 1375
K L+ +LD L WA+ K + +L G++ PV E + V G LPD ++GEF+R GPNPKF P YHWF+GDGMVH +RI +GKA Y R+V+T +L E+ G ++ D+ G GL + + +L KL + G T NT+L +H GRLLAL+E PY ++VL DG ++TIG YD +LQ FTAHPKVDP TG ++ GY + P +++ V++ G + + I + PVMMHDFA +E++A+F+DLP+ F + KGKL F+ ARFGVLP A D +RWF LP F FH +N WE+ EVV L+ C EDFDM+ T+ + A F E+ ++R + + + +DFP+ + G+ R++Y +G+ K+ A+ K DL A+
Sbjct: 20 KGLISKVLDGVEKLIVWAMYDSSKPNYYLSGNYAPVSVETPPCQDLIVKGYLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMVHGMRIKDGKAAYVSRFVKTSRLKQEEFFGRAKFLKIGDIKGVFGLFSVYMQVLCSKLKVLDISYGT--GTGNTALIFHQGRLLALSEADKPYVIKVLEDGDLQTIGLLDYDKRLQHSFTAHPKVDPFTGEMFTFGY-SHTPPYVTYRVITKKGVMLDPVPITISDPVMMHDFAITENYAIFMDLPLYFRPKDMVKGKLVFTFDNTKKARFGVLPRYAKDELQIRWFELPNC-FIFHNANAWED---GNEVV---LITCRLEDFDMELETNSSKDKVANFKNELYEMRFHMKTGEASQRKLSESAVDFPRINENYTGRKQRFVYGTTFEGITKVKAIVKFDLHAE 437 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1138.1 >prot_S-ischiensis_contig1.1138.1 ID=prot_S-ischiensis_contig1.1138.1|Name=mRNA_S-ischiensis_contig1.1138.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=429bp MASVVKALVGWMLDLTSWAITWPDKHSQFLHGSFKPVHDEVVEAVECQVTback to top mRNA from alignment at S-ischiensis_contig1:7761759..7769770- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1138.1 ID=mRNA_S-ischiensis_contig1.1138.1|Name=mRNA_S-ischiensis_contig1.1138.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8012bp|location=Sequence derived from alignment at S-ischiensis_contig1:7761759..7769770- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7761759..7769770- >mRNA_S-ischiensis_contig1.1138.1 ID=mRNA_S-ischiensis_contig1.1138.1|Name=mRNA_S-ischiensis_contig1.1138.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2574bp|location=Sequence derived from alignment at S-ischiensis_contig1:7761759..7769770- (Schizocladia ischiensis KU_0333)back to top |