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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1056 |
| Cds size | 945 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815483.9349334-CDS-S-ischiensis_contig1:7610712..7610784 | 1622815483.9349334-CDS-S-ischiensis_contig1:7610712..7610784 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7610713..7610784 - |
| 1695739727.7963896-CDS-S-ischiensis_contig1:7610712..7610784 | 1695739727.7963896-CDS-S-ischiensis_contig1:7610712..7610784 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7610713..7610784 - |
| 1622815483.9457014-CDS-S-ischiensis_contig1:7611823..7612069 | 1622815483.9457014-CDS-S-ischiensis_contig1:7611823..7612069 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7611824..7612069 - |
| 1695739727.8087087-CDS-S-ischiensis_contig1:7611823..7612069 | 1695739727.8087087-CDS-S-ischiensis_contig1:7611823..7612069 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7611824..7612069 - |
| 1622815483.9629066-CDS-S-ischiensis_contig1:7612539..7612728 | 1622815483.9629066-CDS-S-ischiensis_contig1:7612539..7612728 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7612540..7612728 - |
| 1695739727.8187215-CDS-S-ischiensis_contig1:7612539..7612728 | 1695739727.8187215-CDS-S-ischiensis_contig1:7612539..7612728 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7612540..7612728 - |
| 1622815483.9807315-CDS-S-ischiensis_contig1:7614363..7614470 | 1622815483.9807315-CDS-S-ischiensis_contig1:7614363..7614470 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7614364..7614470 - |
| 1695739727.8283496-CDS-S-ischiensis_contig1:7614363..7614470 | 1695739727.8283496-CDS-S-ischiensis_contig1:7614363..7614470 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7614364..7614470 - |
| 1622815483.999653-CDS-S-ischiensis_contig1:7616191..7616522 | 1622815483.999653-CDS-S-ischiensis_contig1:7616191..7616522 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7616192..7616522 - |
| 1695739727.839783-CDS-S-ischiensis_contig1:7616191..7616522 | 1695739727.839783-CDS-S-ischiensis_contig1:7616191..7616522 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7616192..7616522 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815484.0137327-UTR-S-ischiensis_contig1:7616522..7616631 | 1622815484.0137327-UTR-S-ischiensis_contig1:7616522..7616631 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7616523..7616631 - |
| 1695739727.8503592-UTR-S-ischiensis_contig1:7616522..7616631 | 1695739727.8503592-UTR-S-ischiensis_contig1:7616522..7616631 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7616523..7616631 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1120.1 >prot_S-ischiensis_contig1.1120.1 ID=prot_S-ischiensis_contig1.1120.1|Name=mRNA_S-ischiensis_contig1.1120.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=315bp
MADRSGGGGGGNQQGRSRRQRRANRTGPGHGGRRDLSHKLDDAHVAFVLC
VCQRMLGGELDKVEDLLREKYTESPEQVFALFNDGYNVGSNVDIISHFSP
DMPYPDLLLSAAALHDASLARAFLGYGADARRAVGGVTPLMAAARAASPA
CVKLLLGLPGEGNGPVLTWDTDLAGRRALAHACDGPECHCSCCPRKPGDR
AHVVDLLVTANWKAVLARDEQGNLPLHTACRWGVPQVISCLLATVPVPRD
PVAWADPEPPEHPEGPWPVSLKALQWWQALAQNWEGVSPLQNLEPLVVEE
LAAQSVGFDRKAGQG back to topmRNA from alignment at S-ischiensis_contig1:7610713..7616631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1120.1 ID=mRNA_S-ischiensis_contig1.1120.1|Name=mRNA_S-ischiensis_contig1.1120.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5919bp|location=Sequence derived from alignment at S-ischiensis_contig1:7610713..7616631- (Schizocladia ischiensis KU_0333)
GGGGAGGACAAATTTTTGCCAACTCCCGATCAGCCCCTTGGAGCGGCTGA
CCCCCGGAAGGCCGCAGTGACGCACTGCCGCCGGGGCGGGCTTGCCAAGA
GGGAAGACGATGGCAGACCGCAGCGGAGGCGGGGGCGGTGGTAACCAGCA
GGGCCGTAGCAGACGGCAGCGCAGGGCAAATAGGACGGGCCCCGGGCATG
GTGGTAGAAGGGACTTGAGCCACAAGCTCGACGATGCCCACGTGGCATTT
GTTCTATGCGTGTGCCAGCGGATGCTGGGCGGCGAGCTCGACAAGGTAGA
AGACCTCCTTAGGGAGAAGTACACGGAGTCCCCGGAGCAAGTGTTTGCTC
TCTTCAACGACGGCTACAACGTCGGCTCCAACGTCGACATCATCTCCCAT
TTCTCCCCGGACATGCCGTACCCTGACCTCCTACTGAGCGGTGAGCCTCG
AGGCCTGCGTTGCCATGCAAGCCATGCAATTCTGTGTCTGTTGCAGCTTC
TTTTTCGTGGGATGCGCTAAGTTACAGTAGGTACCACTACGCAGTTGCCT
TGGTCGACTGCGCCGTCGGCTCCACAACAGCGTCTATGTGCTCAAGCCAC
CGTCGGAAGCTCGCGGGGGAAGTCGTAGCCTCACCGCACCCTTGCTGGGC
CAATGCATGTTGTGCAACACGTTGAACACCCAGCCTATGTACACAGGCTG
CCCGTAACTTATCGCACTGTAGTGTGCGACAGGCGTCCGTGGTACTCGTA
CATGTAGGCCCAAAAACAACTGCTCGGTGCCATGATTTTACGCTGGTGTC
TTGTTTGGCAACAAAGTCTCGGGAGCCATGCGCGCACTCGTGCGCATCGT
CACGACGTGCCCTCGAGGGAGTAGAGCTGCACGTGAAGCTTTGACGTTAG
GCAGTGTTTCAGCTTGGTGCAGTTATAGGCATACAGTAGGATACAATTGG
GAAACGGGTGTGCATGCGATCCTTTTTTGCTTTGTGTTCACCTTGAAAAT
TCGTTCATACTTGGGGCGGCATGTCCATGGTATGTGGACTACGGTACATA
AGCACAACGTGGTCAATGGTCCAGGACTACGGAAAAGACAACACGAGTAC
CCGTACATGTACTACGAGTACGTATATGAGCACAACGTGGGTAAAATATT
TCGATGTACTGTATGAATTTGTGGCTTATGTGGGAACGAAATCCGGAGAC
CGTTGACCACGCAACAGGGGACGAAGCAATTGTACTACCGGCTGGTGCGA
AGAATAGGCTACAATTTCTGAGTGAACGGCTTGCCCAGTTCTGGGCCCTA
TGCCCTCTCTCTAACCTGTGAACTGAAATCCGTTTCCCTGCGATCCAATC
GGTTTCCCGGGCATGGCCGGTGCCTGCAGCGGCCGCTGCAACTTTTTCTG
TTGCCTGAACAGCCTGCGCGTCTGGAGGTGAGGTGTGACCATGAACCCTT
AGAGGATCACGGCGCACCAAACCAGGTACTCGTAAGAACTTGGAGTACTC
TACGTCCGAATACAATGCAAGAGTTGGGTGAGGCATGAGTGCGCTGTATG
TCCGTCCTCCGAGCGCTTAAGGGGACCTCTGATAGCTGTGGTGGCACACG
AACCTGCAAGAGTCGGGCGAGCAATCGTGTTCTGCACGTCGTCCTCTGTT
CCTGTACAAGTACGAGTACCTATTGACCTTGCGTGCTGAGGCCCAAAGTT
CAACTTCGGGTTTGCCCTAAGCTGTTGATTGCTTTATGGAAAAATCGTAC
GCGCCCTTGGTGAGTTATCGTGGCTCTTGCACGGGGCTATGAGATCCGTA
GCTAGGGTGCCGCGGTCCCCTAAGCAGTGGTCAACAGGGAAACGGGTCAA
GTAACAACCCCCCGAAAAAAAGTTCTTCCTGCAGAAGTTAAGTGCGTGAG
GACGCAACCCATCCCCCCACAGGTCGCAGAAGGTGCCGCACGCACTACTG
TATATATATATATATATATATACGCGCTTCGTATGTACTCACGTTGTGCT
TGCCGTAGTCCCGAGACCATTGACCACGCGCCTCGATAGAGACGGAGCCA
TAAGTTGAGAAAACCTGCTTGTCTTGGGTCGGTCGCCTCGATTTGACAGC
TCTATCCTACATTATGCTGCCTGTGCGTTTCTCGCCCGTGTTGTCCCCGG
CGTGCCCCCAGCTGCTGCGCTGCACGACGCATCGCTGGCGAGGGCATTTC
TGGGCTACGGAGCTGACGCGCGCCGGGCCGTTGGGGGAGTGACGCCCCTT
ATGGCTGCAGCAAGAGCGGTAAGCGAGCCCCCCCCCCCTTTGGGGCCGCC
GGCAGCAATGATTCTGACAACGAATTGTGTCGATCTGCAAAACTGCCTGT
GCTAGGTACTGCAGTTGTTCCAAACTCGAAAGAGGGTGTGTGGTTCAAAG
TCTCTTGGCTGAGCCGATCACAGCCTGAGACGTGCTTCCGAAGTGCGATA
TACGTACTGTGCGGTAGTGCTCGTACTACAGTATTAACAAGAAAAGCACA
GGGCGAGGTGCAGGCCACGTCACTAGTGACCTCAACAATGGCCCTTCCTC
ACCTCGCCAGGGCAGGGTTGTGTGGGGCAGGGGAGGAGGAGGAGGAGGAG
GAGATGCGAAATGTGCTGCCAAACACCAACCGTGAGGCGTACGCCGCTGT
GATGGATGGGGCTTTGCAGCGTAGGGAGCGAGACATGGTATTTGCAGCCA
GTGCTGAGTCTCTCTATGGTCAGATGATCCCATCACCCTCGGAACCAGGC
TTAAAGAAGTATTTGCAAGGGAAACTCGGGTGCGGGACGTGCCTTAAGTT
TCTGTTTCGGTCCGAAACCGTGCCGTTACGGGCGTGTAGTATGTTGCGGG
GATCACAGGGGGAGGGGGGCCGGGTGTGATGTGTGCGTAGAGGAGGATGA
GACAGCAAGACACGCTATGCTTGAGTGCCCCCACTAAAATTCCGCCAGGA
TGACTCTACACGCTACCCTCTCCGAATGTGCCTGCACTGATACCCATACA
AGTAGCTAGGTACTTCGAAGTATGTGTACTCGTGGCGGATGAGGATCCCA
TCCTGTGCTTGCCACCGACTCGAGCCAGTATACTCCGTGGTGTCCGGGGG
CTCGGCCCCCATACGGGGTAGCCTTACGGCCATTGGCCACGCAGCCCTAC
TACGCCGGGCCGGAGCATTCCGGTTTTGCACCGGACAGGCGCCAGTATGA
AAGCTTTAAAAGTGCCCCCACAGTACGCCCCTTCTGGATCCCTCAGGTGA
GACTGCGCTGTGGCCAGAGGAAACACAGAGCAAGGGGTAGACTCTGCAGT
TCAAGATTTTCTTGTGTCTGTCTGGTGTTGCGGTTGGCCTGAGTAGGCAG
GGTTGATGGTGACCTTGGATATTCCCCCTCCATGCTCCGGCATGGTGGGG
GACCCCCCTCCTCTGCTGAACCTCGGTCCGGCAGGGGAGGGGTGCCCACC
GCCCACACTCTGGCGGGTCAGGGGCGGGGGGGGTATAGACCCAACCACTC
CCCCGCCATGCCCGGGCGGTTGGTCCCTCCCTCTCACCCTGGCTAGCCAG
AGGCGGGAGGGAGATTGCTCCGTCGTCAACGGCCCGTGGTCAATGGTCTC
GGGACTATGGCAAGCACAACATGCGTACATATTTGATGTATGCTACCCTT
GGAGGACTGACTCAAAAGAAGCGTACCTCAAGCCCCAGGCTGCTCGTACT
GCCGTTGTATTGTGTGCCAGGCCTCCAAGCAGATGTCAACTAGCTCTCTG
CTGCTTGCACATACCGTGACCTTGACGCGTATGTTGCTCACCGCCCGCTC
ATCCCCCGCTGTCACCCACCTCCTTCCCTCACCCCCCCCAACCACAACCG
CCACCACCACCGCCACCGCCACCGACACTCAAACCCCGGTGTATGGCGCG
CAGGCGAGCCCGGCGTGTGTCAAGCTGCTGCTGGGACTCCCTGGTGAGGG
CAACGGCCCTGTTTTGACATGGGACACGGACTTGGCGGGGCGCCGGGCAC
TGGCACACGCCTGCGACGGGCCCGAGTGCCACTGTTCTTGTTGCCCCCGC
AAACCCGGCGACCGAGCCCATGTCGTGGACTTGCTCGTCACGGTGAGTGT
GTGTGTGTCTGTGTGTGTGCGTATGTGTGTGTGTTTAGTGTGTGTGTGCG
TGCATGCATGCATGTGGGCTGTGTGCACATGTGTGTTTGGTGTGTGTGTG
TGTGTTTGTGTGCGTGCGTGCATGCATTCACACACATTTGCGGACACGTG
CGCACGCACCTATGTTTTCCGTGGCTTGATGACTGGGGCGACATACCCGG
CGCGCGCTAGCCGCTTCGACGGGAGGGCATGGTGTCAGTGGGGCAAAGAC
AGCCCCAAGAGTTGCCGTGCTTGTTAGTATCTCAAAGTACTCGTGCACGG
CTGTGCAAACCTGAGGGGAGAAGGCTGACGTCATGCTTGGGTTTTTAGCA
GGCCACGCCCGGCCGCGGTCGGCAAGTCCTCTGAGGCTTTGACCCCACCC
CTTCCCCCACTCCCTCTCTCCTCCCCTCCCCTCCCCCCCCCGACCCACCC
GTGGCTGCCCAGGCCAACTGGAAGGCTGTTCTGGCGCGGGACGAGCAAGG
CAACCTGCCCCTGCATACCGCCTGTCGTTGGGGAGTGCCTCAGGTCATCT
CCTGCCTGCTGGCGACGGTCCCGGTCCCCCGAGACCCGGTGGCGTGGGCT
GATCCGGAGCCTCCGGAGCACCCAGAGGGGCCGTGGCCGGTCTCGCTGAA
GGCGTTGCAGTGGTGGCAGGCGCTGGCCCAGAACTGGGAGGGTGTGAGCC
CCCTGCAGGTGAGAGGGCGGCGGCGGTGGTGGCAAGCGCCTGCTGGTTGC
TTTCGCCACGGTTGGTTGCGATCGAGCAGCTGTGTGTGTGTGTGTGTGTA
CTGTGATGTGTGTGGCTCATCGACTGTTGTTTCGACCTGGCTGCCGTTTT
GTGTGTGTGTGGCTCGAGTGCTGTTTTGACCCGAGAAAGCTGGATTGTTC
TGCAGCAGCGCTTGCAGTGCTGCTGTATGTGGGACTAGGTTCTACAGTAT
GTAGAACTGGGCTGTTTCTGCGTGTGTGCACTACTGTAATTCCAGCATGT
CCCCGTGTTTGGTGCGCTCTTGCCACTGATCGGCGGCCCAGCAGTTTTCG
CTGCCCGGCCGCCGGTAGCGTTCGACTGAGGTGCCTACACACTAACGTAC
TCGAGCACCGTAGTGCTTTTCACTACTGTAGTAGCGCCTGCACGTAGTGC
GTGAGTTCAGGTACTGTATGAGTAGCACTTTGAAGCGCTTACCTGCTTGT
TGGAACGTGTCGTTCGGCTTGCAGGTGGAGTGCGTGTGAGCTTGAGATGC
TTGTCCATGTGCCTGTGCTGTACAGAACACGATAGACGGGGACAGTGCCA
GTGTGGTTGGCAATGCTCTAAAACCCGAAACACCTCCAGCTCTGTGGATG
AGAGGATTCCGGGTCATACTTAGCCTCCGGCACGGTGAGGGAACCCCCTC
CCCCGCTAGGTCTCGGTCTAGCAGGGGAGGGCCCCCCCCCACCCGGACTC
TCACGAGTCGGGGATGGGGGGGGTATGGACCTGGCCACCCCTCTGCTTGT
GGCGGGGGGCTGGCCACCCCCTCCCACCCTGGCTCTGCCAGGGGAGGGAG
GGGTCCTGCTCCGTCTCGAACGAGGCGCCTGGTCAATGGTCTTGGGACTA
ACACCACGTGAGTACATATACTTAGCTTCTGGTCAAGGGCCGCCCCTCCA
ATAACATGGGCACGCAAACTACCGTGGTGCATTTGGGGGTCTGCGACGAA
CACACCCCCAGAAAACAACATTTTCCCTTGTTGACACTCGCACTCAGAAC
CTGGAACCGCTGGTCGTTGAGGAGTTGGCCGCTCAGTCCGTGGGCTTCGA
CCGCAAGGCGGGTCAGGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7610713..7616631- >mRNA_S-ischiensis_contig1.1120.1 ID=mRNA_S-ischiensis_contig1.1120.1|Name=mRNA_S-ischiensis_contig1.1120.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1890bp|location=Sequence derived from alignment at S-ischiensis_contig1:7610713..7616631- (Schizocladia ischiensis KU_0333)
ATGGCAGACCGCAGCGGAGGCGGGGGCGGTGGTAACCAGCAGGGCCGTAG
CAGACGGCAGCGCAGGGCAAATAGGACGGGCCCCGGGCATGGTGGTAGAA
GGGACTTGAGCCACAAGCTCGACGATGCCCACGTGGCATTTGTTCTATGC
GTGTGCCAGCGGATGCTGGGCGGCGAGCTCGACAAGGTAGAAGACCTCCT
TAGGGAGAAGTACACGGAGTCCCCGGAGCAAGTGTTTGCTCTCTTCAACG
ACGGCTACAACGTCGGCTCCAACGTCGACATCATCTCCCATTTCTCCCCG
GACATGCCGTACCCTGACCTCCTACTGAGCGATGGCAGACCGCAGCGGAG
GCGGGGGCGGTGGTAACCAGCAGGGCCGTAGCAGACGGCAGCGCAGGGCA
AATAGGACGGGCCCCGGGCATGGTGGTAGAAGGGACTTGAGCCACAAGCT
CGACGATGCCCACGTGGCATTTGTTCTATGCGTGTGCCAGCGGATGCTGG
GCGGCGAGCTCGACAAGGTAGAAGACCTCCTTAGGGAGAAGTACACGGAG
TCCCCGGAGCAAGTGTTTGCTCTCTTCAACGACGGCTACAACGTCGGCTC
CAACGTCGACATCATCTCCCATTTCTCCCCGGACATGCCGTACCCTGACC
TCCTACTGAGCGCTGCTGCGCTGCACGACGCATCGCTGGCGAGGGCATTT
CTGGGCTACGGAGCTGACGCGCGCCGGGCCGTTGGGGGAGTGACGCCCCT
TATGGCTGCAGCAAGAGCGCTGCTGCGCTGCACGACGCATCGCTGGCGAG
GGCATTTCTGGGCTACGGAGCTGACGCGCGCCGGGCCGTTGGGGGAGTGA
CGCCCCTTATGGCTGCAGCAAGAGCGGCGAGCCCGGCGTGTGTCAAGCTG
CTGCTGGGACTCCCTGGTGAGGGCAACGGCCCTGTTTTGACATGGGACAC
GGACTTGGCGGGGCGCCGGGCACTGGCACACGCCTGCGACGGGCCCGAGT
GCCACTGTTCTTGTTGCCCCCGCAAACCCGGCGACCGAGCCCATGTCGTG
GACTTGCTCGTCACGGCGAGCCCGGCGTGTGTCAAGCTGCTGCTGGGACT
CCCTGGTGAGGGCAACGGCCCTGTTTTGACATGGGACACGGACTTGGCGG
GGCGCCGGGCACTGGCACACGCCTGCGACGGGCCCGAGTGCCACTGTTCT
TGTTGCCCCCGCAAACCCGGCGACCGAGCCCATGTCGTGGACTTGCTCGT
CACGGCCAACTGGAAGGCTGTTCTGGCGCGGGACGAGCAAGGCAACCTGC
CCCTGCATACCGCCTGTCGTTGGGGAGTGCCTCAGGTCATCTCCTGCCTG
CTGGCGACGGTCCCGGTCCCCCGAGACCCGGTGGCGTGGGCTGATCCGGA
GCCTCCGGAGCACCCAGAGGGGCCGTGGCCGGTCTCGCTGAAGGCGTTGC
AGTGGTGGCAGGCGCTGGCCCAGAACTGGGAGGGTGTGAGCCCCCTGCAG
GCCAACTGGAAGGCTGTTCTGGCGCGGGACGAGCAAGGCAACCTGCCCCT
GCATACCGCCTGTCGTTGGGGAGTGCCTCAGGTCATCTCCTGCCTGCTGG
CGACGGTCCCGGTCCCCCGAGACCCGGTGGCGTGGGCTGATCCGGAGCCT
CCGGAGCACCCAGAGGGGCCGTGGCCGGTCTCGCTGAAGGCGTTGCAGTG
GTGGCAGGCGCTGGCCCAGAACTGGGAGGGTGTGAGCCCCCTGCAGAACC
TGGAACCGCTGGTCGTTGAGGAGTTGGCCGCTCAGTCCGTGGGCTTCGAC
CGCAAGGCGGGTCAGGGGAACCTGGAACCGCTGGTCGTTGAGGAGTTGGC
CGCTCAGTCCGTGGGCTTCGACCGCAAGGCGGGTCAGGGG back to top
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