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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-01_008170.1 |
| Exons | 1 |
| Model size | 2369 |
| Cds size | 1173 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815483.6287844-UTR-S-ischiensis_contig1:7583917..7584107 | 1622815483.6287844-UTR-S-ischiensis_contig1:7583917..7584107 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7583918..7584107 + |
| 1695739727.568119-UTR-S-ischiensis_contig1:7583917..7584107 | 1695739727.568119-UTR-S-ischiensis_contig1:7583917..7584107 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7583918..7584107 + |
| 1622815483.6522222-UTR-S-ischiensis_contig1:7585280..7586286 | 1622815483.6522222-UTR-S-ischiensis_contig1:7585280..7586286 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7585281..7586286 + |
| 1695739727.5898566-UTR-S-ischiensis_contig1:7585280..7586286 | 1695739727.5898566-UTR-S-ischiensis_contig1:7585280..7586286 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7585281..7586286 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815483.6418147-CDS-S-ischiensis_contig1:7584107..7585280 | 1622815483.6418147-CDS-S-ischiensis_contig1:7584107..7585280 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7584108..7585280 + |
| 1695739727.5782976-CDS-S-ischiensis_contig1:7584107..7585280 | 1695739727.5782976-CDS-S-ischiensis_contig1:7584107..7585280 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7584108..7585280 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1115.1 >prot_S-ischiensis_contig1.1115.1 ID=prot_S-ischiensis_contig1.1115.1|Name=mRNA_S-ischiensis_contig1.1115.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=391bp
MPQKARSGQVALSSGPEHTPCMELFMFLAWVLADPFWIPTSSAAPPPATT
PRQDIWLKMHSGESLARTATDLEGMLSAYRAETLALLEVLMRSPELETAA
NAHVQSKGGGPSFLSALLCDMDFVEDMPEARVWVGFPTARNPLLLRPEEL
EAAADTESGTAGDQGAAPAPPSSPLGGQADVPGRRLRLESLDPNTLREAH
AFALAQEQLWRQQQQQQEEEEEEEQQQVREKKQDDLRGAGKDGNPRRGSL
LRKGVRGKVKALAAELAASDEILLSLEVSLRSLGDARAHAKRQAGCLREV
AEEAVRQRLVQRAYRLRAAAACWEEKEEGLEIRMRAGRARMFAERQVIHV
CELLRCTSKYSVLRNTLILKPRRAYQAFISQCICTVESSN* back to topmRNA from alignment at S-ischiensis_contig1:7583918..7586286+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1115.1 ID=mRNA_S-ischiensis_contig1.1115.1|Name=mRNA_S-ischiensis_contig1.1115.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2369bp|location=Sequence derived from alignment at S-ischiensis_contig1:7583918..7586286+ (Schizocladia ischiensis KU_0333)
GTGCCCAGCTGCCCTTGAATAAGAACCATGCCCCACCGCTTTGGGGGAGG
GGCCTACCGAGGGGGGACCAAGTCAATGCGGCCTTGGAGAGGCAGAGGCG
CCGTGAAAAAATGGGAGCTATGAGGGAAGAAAGTGCCGAGGCACTACTGC
GGGCTATTAGACATCGAGACAACTTAGTACAGGTGCGCATATGCCGCAGA
AAGCTCGAAGCGGTCAGGTCGCCTTGAGCTCTGGTCCAGAACATACCCCA
TGCATGGAGCTCTTCATGTTTCTTGCCTGGGTCCTGGCAGACCCGTTCTG
GATCCCCACCTCCTCTGCCGCCCCCCCTCCTGCCACCACGCCACGCCAGG
ACATCTGGCTCAAGATGCACAGCGGCGAGTCCTTGGCCCGCACCGCCACG
GACCTGGAGGGCATGCTCTCCGCTTACCGAGCAGAAACGCTCGCCTTGCT
GGAGGTACTCATGCGCTCCCCGGAGCTCGAGACCGCCGCCAACGCCCACG
TGCAGAGCAAAGGTGGGGGCCCCTCCTTCCTCTCAGCCCTGCTTTGCGAC
ATGGACTTTGTGGAAGACATGCCAGAGGCTAGGGTCTGGGTTGGCTTCCC
CACCGCCAGGAATCCATTACTGCTGCGCCCCGAGGAGCTCGAAGCAGCTG
CGGACACTGAATCTGGCACCGCTGGCGACCAGGGCGCTGCCCCTGCCCCC
CCATCCTCCCCTCTGGGAGGACAAGCAGATGTGCCCGGCCGGCGCCTGAG
GCTCGAGAGCCTCGACCCCAACACGCTGAGGGAAGCCCACGCTTTTGCCC
TGGCGCAAGAGCAGCTGTGGCGGCAGCAGCAGCAGCAGCAAGAGGAGGAG
GAGGAGGAGGAGCAGCAGCAGGTGAGAGAGAAGAAACAGGATGACCTGCG
CGGAGCAGGCAAGGACGGGAACCCTCGGCGGGGCAGCCTCCTGCGCAAAG
GGGTGCGGGGCAAGGTCAAGGCATTGGCCGCAGAGCTGGCGGCCAGCGAT
GAGATCCTGTTGAGCCTGGAGGTTTCGCTGCGGAGCCTGGGGGACGCCCG
GGCCCATGCAAAGCGACAGGCGGGTTGTTTGCGGGAGGTGGCAGAGGAGG
CCGTGAGACAGCGGCTCGTGCAGAGGGCATATCGGCTGCGGGCGGCGGCG
GCATGCTGGGAGGAGAAAGAGGAGGGGCTGGAGATCAGGATGAGGGCCGG
CCGGGCGAGGATGTTTGCGGAGAGGCAGGTAATCCATGTTTGTGAGCTGT
TGCGTTGTACTTCGAAGTATTCAGTACTTCGAAATACTTTAATACTTAAG
CCTCGCCGGGCTTACCAGGCGTTTATCAGCCAATGCATATGCACTGTAGA
GAGCTCTAACTAAGTACTACTTCGAAGTACTTTGAAGCTTGTACGTAGCT
AGCATGCCCAAGTACTCGGCCTCCCGTACCTAATGCGCTTATTCGGAACT
TCTACTGCTGCACTTGGGTACGGCATGCTTTATACTTTTCCTCATAAAGG
TCAAATGGCCCCGAAACTATGTACTCGAGTAGTTTATCTAGCAAGTACTT
TCCCCTAGGTTTCACTTGGCTTACCGAAGTGTACGCCAGCCTAGCTACCT
CGAAGTACAAGTGCAGTCTTTGACCACTGTTCACAAGAGTCGCCGCCCTG
GTTACTCAACCGATTGTCTATTCGCATCAGCGGCAGTGTTTGTTGTCCAA
AGACCATGTACGGTACTGTACTATAGATTTTTGACTGCTTCCAAAACCAA
ATCTCCCGACTGCTTCCGCGGGCAGGAAGCGGACAGGAAGCGTATGCTGA
AAGAACGCTTGGAGGTGCAGGCCGGAGCAAGGCTTGAGCGACGGCGGAGG
GCACAGTTGCGCAAGAAGCACGAGTCGGTGAGAAGCAAGCGCGCATTCCC
GATCAGACAGCACTCTTCCTGTGGAGGAGCACAGTGCCCGCAGGCAAAAT
TCTCATACTTCCAAGATACCTACACACGACACATACCTATGAACCTGCTT
GGAAATTCCCATATGATCCAGTGCGTGGGTGCCAAGACGAGCGAAGTCCT
GGTTTGCTCGAGCAGACCATGTAGCGTGTGGAGCTGTAAACGTTGTGTAG
CTATGCACGAGTGCGTTGACGCATGTGCTGTTAACAGTACAACGTTGGAG
GCTTTTCCTTGTGAGCACGCATGTGGCCCGGTCGACAATGTCGTGCACCC
TTTTGGTGCGGCCTGTGGCGGCAAAGGACGGAAAGGGCTAGCCGCAGCCA
GTGTCCTCAAGCAGAGGATAACAGAAACAGTCTCCAGCCATAGTAGTTAG
GGTCTGCCCATAGAAAACCCGATCATTTTTCGTATACATATGGCAGCTAC
AGCGATCAATGGACTAAGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7583918..7586286+ >mRNA_S-ischiensis_contig1.1115.1 ID=mRNA_S-ischiensis_contig1.1115.1|Name=mRNA_S-ischiensis_contig1.1115.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2346bp|location=Sequence derived from alignment at S-ischiensis_contig1:7583918..7586286+ (Schizocladia ischiensis KU_0333)
ATGCCGCAGAAAGCTCGAAGCGGTCAGGTCGCCTTGAGCTCTGGTCCAGA
ACATACCCCATGCATGGAGCTCTTCATGTTTCTTGCCTGGGTCCTGGCAG
ACCCGTTCTGGATCCCCACCTCCTCTGCCGCCCCCCCTCCTGCCACCACG
CCACGCCAGGACATCTGGCTCAAGATGCACAGCGGCGAGTCCTTGGCCCG
CACCGCCACGGACCTGGAGGGCATGCTCTCCGCTTACCGAGCAGAAACGC
TCGCCTTGCTGGAGGTACTCATGCGCTCCCCGGAGCTCGAGACCGCCGCC
AACGCCCACGTGCAGAGCAAAGGTGGGGGCCCCTCCTTCCTCTCAGCCCT
GCTTTGCGACATGGACTTTGTGGAAGACATGCCAGAGGCTAGGGTCTGGG
TTGGCTTCCCCACCGCCAGGAATCCATTACTGCTGCGCCCCGAGGAGCTC
GAAGCAGCTGCGGACACTGAATCTGGCACCGCTGGCGACCAGGGCGCTGC
CCCTGCCCCCCCATCCTCCCCTCTGGGAGGACAAGCAGATGTGCCCGGCC
GGCGCCTGAGGCTCGAGAGCCTCGACCCCAACACGCTGAGGGAAGCCCAC
GCTTTTGCCCTGGCGCAAGAGCAGCTGTGGCGGCAGCAGCAGCAGCAGCA
AGAGGAGGAGGAGGAGGAGGAGCAGCAGCAGGTGAGAGAGAAGAAACAGG
ATGACCTGCGCGGAGCAGGCAAGGACGGGAACCCTCGGCGGGGCAGCCTC
CTGCGCAAAGGGGTGCGGGGCAAGGTCAAGGCATTGGCCGCAGAGCTGGC
GGCCAGCGATGAGATCCTGTTGAGCCTGGAGGTTTCGCTGCGGAGCCTGG
GGGACGCCCGGGCCCATGCAAAGCGACAGGCGGGTTGTTTGCGGGAGGTG
GCAGAGGAGGCCGTGAGACAGCGGCTCGTGCAGAGGGCATATCGGCTGCG
GGCGGCGGCGGCATGCTGGGAGGAGAAAGAGGAGGGGCTGGAGATCAGGA
TGAGGGCCGGCCGGGCGAGGATGTTTGCGGAGAGGCAGGTAATCCATGTT
TGTGAGCTGTTGCGTTGTACTTCGAAGTATTCAGTACTTCGAAATACTTT
AATACTTAAGCCTCGCCGGGCTTACCAGGCGTTTATCAGCCAATGCATAT
GCACTGTAGAGAGCTCTAACTAAATGCCGCAGAAAGCTCGAAGCGGTCAG
GTCGCCTTGAGCTCTGGTCCAGAACATACCCCATGCATGGAGCTCTTCAT
GTTTCTTGCCTGGGTCCTGGCAGACCCGTTCTGGATCCCCACCTCCTCTG
CCGCCCCCCCTCCTGCCACCACGCCACGCCAGGACATCTGGCTCAAGATG
CACAGCGGCGAGTCCTTGGCCCGCACCGCCACGGACCTGGAGGGCATGCT
CTCCGCTTACCGAGCAGAAACGCTCGCCTTGCTGGAGGTACTCATGCGCT
CCCCGGAGCTCGAGACCGCCGCCAACGCCCACGTGCAGAGCAAAGGTGGG
GGCCCCTCCTTCCTCTCAGCCCTGCTTTGCGACATGGACTTTGTGGAAGA
CATGCCAGAGGCTAGGGTCTGGGTTGGCTTCCCCACCGCCAGGAATCCAT
TACTGCTGCGCCCCGAGGAGCTCGAAGCAGCTGCGGACACTGAATCTGGC
ACCGCTGGCGACCAGGGCGCTGCCCCTGCCCCCCCATCCTCCCCTCTGGG
AGGACAAGCAGATGTGCCCGGCCGGCGCCTGAGGCTCGAGAGCCTCGACC
CCAACACGCTGAGGGAAGCCCACGCTTTTGCCCTGGCGCAAGAGCAGCTG
TGGCGGCAGCAGCAGCAGCAGCAAGAGGAGGAGGAGGAGGAGGAGCAGCA
GCAGGTGAGAGAGAAGAAACAGGATGACCTGCGCGGAGCAGGCAAGGACG
GGAACCCTCGGCGGGGCAGCCTCCTGCGCAAAGGGGTGCGGGGCAAGGTC
AAGGCATTGGCCGCAGAGCTGGCGGCCAGCGATGAGATCCTGTTGAGCCT
GGAGGTTTCGCTGCGGAGCCTGGGGGACGCCCGGGCCCATGCAAAGCGAC
AGGCGGGTTGTTTGCGGGAGGTGGCAGAGGAGGCCGTGAGACAGCGGCTC
GTGCAGAGGGCATATCGGCTGCGGGCGGCGGCGGCATGCTGGGAGGAGAA
AGAGGAGGGGCTGGAGATCAGGATGAGGGCCGGCCGGGCGAGGATGTTTG
CGGAGAGGCAGGTAATCCATGTTTGTGAGCTGTTGCGTTGTACTTCGAAG
TATTCAGTACTTCGAAATACTTTAATACTTAAGCCTCGCCGGGCTTACCA
GGCGTTTATCAGCCAATGCATATGCACTGTAGAGAGCTCTAACTAA back to top
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