mRNA_S-ischiensis_contig1.1109.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: A0A7S2E4P2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E4P2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.460e-15 Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 1
Query: 28 AVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRLV 201
AVHN+ VF AL+RY+RS+GVPYKHRV+ LLTRLLQSPHLF T+PP L +LSG+ LV
Sbjct: 1 AVHNSKVFAALVRYMRSSGVPYKHRVVVLLTRLLQSPHLF--TEPPPLGLLSGMEALV 56
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: D0N4V0_PHYIT (HECT E3 ubiquitin ligase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N4V0_PHYIT) HSP 1 Score: 70.5 bits (171), Expect = 4.420e-9 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 4 AIASLPRGAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
AI + GAVHN V+GAL+RYLRS G P+K RV+ LL +LL +P LF + P+L+ L I+RL VD +SG
Sbjct: 3972 AIELVAHGAVHNRRVYGALVRYLRSPGAPFKGRVVRLLQQLLHNPELFPADEVPELNALESISRLALTRAEVDRASG 4048
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: A0A2P4Y2W2_9STRA (HECT E3 ubiquitin ligase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2W2_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 7.220e-9 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 25 GAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
GAVHN ++GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L I+RL VD +SG
Sbjct: 183 GAVHNRRIYGALVRYLRSPGAPFKGRVVRLLQQLLHHPELFPTDEVPELDALESISRLALTRAEVDRASG 252
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: W2KUN6_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KUN6_PHYPR) HSP 1 Score: 68.2 bits (165), Expect = 2.300e-8 Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 4 AIASLPRGAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
AI + GAVHN V+GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L I RL VD +SG
Sbjct: 2355 AIELVAYGAVHNRRVYGALVRYLRSPGAPFKGRVVRLLQQLLHHPELFPADEVPELDALESIARLALTRAEVDRASG 2431
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: W2PZ37_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PZ37_PHYPN) HSP 1 Score: 68.2 bits (165), Expect = 2.370e-8 Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 4 AIASLPRGAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
AI + GAVHN V+GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L I RL VD +SG
Sbjct: 4170 AIELVAYGAVHNRRVYGALVRYLRSPGAPFKGRVVRLLQQLLHHPELFPADEVPELDALESIARLALTRAEVDRASG 4246
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: A0A662XCP4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCP4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.740e-8 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 16 LPRGAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL 198
+ GAVHN ++GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L IT+L
Sbjct: 862 MAHGAVHNRKIYGALVRYLRSPGAPFKGRVVRLLLQLLHRPELFPANEVPELDALESITQL 922
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: G5A2G8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2G8_PHYSP) HSP 1 Score: 67.0 bits (162), Expect = 5.500e-8 Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 4 AIASLPRGAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
A + GAVHN ++GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L I+RL VD +SG
Sbjct: 4989 ATEMVTHGAVHNRKIYGALVRYLRSPGAPFKGRVVRLLQQLLHHPELFPADEIPELDALESISRLAVTRAEVDRASG 5065
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: A0A6A4FIH1_9STRA (HECT domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FIH1_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 6.050e-8 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 25 GAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
GAVHN ++GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L I+RL VD +SG
Sbjct: 364 GAVHNRRIYGALVRYLRSPGAPFKGRVVRLLQQLLYHPELFPADEVPELDALESISRLAVTRAEVDRASG 433
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: A0A6G0PDT4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0PDT4_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 7.040e-8 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 25 GAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
GAVHN ++GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L I+RL VD +SG
Sbjct: 2603 GAVHNRRIYGALVRYLRSPGAPFKGRVVRLLQQLLYHPELFPADEVPELDALESISRLAVTRAEVDRASG 2672
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Match: A0A6G0LKD7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0LKD7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 7.160e-8 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 25 GAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSETDPPDLSILSGITRL------VDASSG 216
GAVHN ++GAL+RYLRS G P+K RV+ LL +LL P LF + P+L L I+RL VD +SG
Sbjct: 3615 GAVHNRRIYGALVRYLRSPGAPFKGRVVRLLQQLLYHPELFPADEVPELDALESISRLAVTRAEVDRASG 3684 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1109.1 >prot_S-ischiensis_contig1.1109.1 ID=prot_S-ischiensis_contig1.1109.1|Name=mRNA_S-ischiensis_contig1.1109.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=447bp PAIASLPRGAVHNNTVFGALLRYLRSAGVPYKHRVIDLLTRLLQSPHLFSback to top mRNA from alignment at S-ischiensis_contig1:7542747..7544546+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1109.1 ID=mRNA_S-ischiensis_contig1.1109.1|Name=mRNA_S-ischiensis_contig1.1109.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1800bp|location=Sequence derived from alignment at S-ischiensis_contig1:7542747..7544546+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7542747..7544546+ >mRNA_S-ischiensis_contig1.1109.1 ID=mRNA_S-ischiensis_contig1.1109.1|Name=mRNA_S-ischiensis_contig1.1109.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2682bp|location=Sequence derived from alignment at S-ischiensis_contig1:7542747..7544546+ (Schizocladia ischiensis KU_0333)back to top |