mRNA_S-ischiensis_contig1.1079.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A7S2UTY0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTY0_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.850e-21 Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 34 YLAIREEKLQEQAARPLPEKRAAHIFQNCALFFNGRTGEGTALHLAARIQQHGGKTV--RSANKATHIIAENLSGSKTEKAVQSGGKTKVVRPDWITSSIDAGKRLPIHPFLVIHTQRRGLESFF 402
Y + R KL EQ+A+P E A IF+ L+FNGRTG+ +A HLA +Q HGG+ S + TH+IA+NLSGSK E +++ K KV++P+W+T S++ + L FL+ Q G+ FF
Sbjct: 81 YFSTRNRKLDEQSAKP--EANAKQIFKGKVLYFNGRTGDTSAFHLAKMVQMHGGRVSWNLSRRQVTHVIAQNLSGSKVEAYLKTASKVKVMKPEWVTKSLENEQLLEEGDFLLYRPQGIGIRKFF 203
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A6H5KK71_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK71_9PHAE) HSP 1 Score: 101 bits (252), Expect = 4.120e-20 Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 31 GYLAIREEKLQEQAARPLPEKRAAHIFQNCALFFNGRTGEGTALHLAARIQQHGGKTV--RSANKATHIIAENLSGSKTEKAVQSGGKTKVVRPDWITSSIDAGKRLPIHPFLVIHTQRRGLESFFGMAAVA 420
GY R KL EQA + E IF + +FNGR+G+ +HL + +HGG+T S TH+IAENLS KT+KA++S K KVV PDW+ I GK LP PF V+ +Q+ G++ FFG ++ A
Sbjct: 64 GYWQFRTSKLLEQAPAGVSE-----IFAGLSFYFNGRSGDKQTMHLKGAVSKHGGRTTPFMSMKGVTHVIAENLSAVKTDKAMKSL-KMKVVHPDWVNRCIAEGKLLPDAPFRVVRSQKLGMDKFFGSSSSA 189
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A485L077_9STRA (Aste57867_14269 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L077_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.390e-16 Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 88 EKRAAHIFQNCALFFNGRTGEGTALHLAARIQQHGGKT--VRSANKATHIIAENLSGSKTEKAVQSGGKTKVVRPDWITSSIDAGKRLP 348
E + +FQ C +FNGRTG+ ++ +L ++ HGG T + + TH+IA NLSGSKTE +QSGGK V+P WI SI GKR P
Sbjct: 37 ENCVSSLFQGCNFYFNGRTGDVSSYYLIKMVKAHGGNTSIMHRKTRVTHVIASNLSGSKTEAVIQSGGKVHCVQPQWILDSIAKGKRQP 125
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A6G0WPY1_9STRA (BRCT domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPY1_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 5.930e-15 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 106 IFQNCALFFNGRTGEGTALHLAARIQQHGGKT--VRSANKATHIIAENLSGSKTEKAVQSGGKTKVVRPDWITSSIDAGKRLPIHPFLV 366
+FQ C +FNGRTG ++ +L ++ HGG ++ TH+IA NLSGSKTE +QSGG+ V+P WI SI+ GKR P ++V
Sbjct: 54 LFQGCNFYFNGRTGNVSSYYLIKMVKAHGGSISITHRKSRVTHVIATNLSGSKTEAVLQSGGRIHCVQPQWILDSIEKGKRQPEAKYVV 142
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A024TZ45_9STRA (BRCT domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZ45_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.360e-14 Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 106 IFQNCALFFNGRTGEGTALHLAARIQQHGGKT--VRSANKATHIIAENLSGSKTEKAVQSGGKTKVVRPDWITSSIDAGKRLPIHPFLVIH---TQRRGLESFFGMAAVAATPPTTRN 444
+FQ C +FNG TG ++ +L ++ HGG T V + TH+IA NLSGSKT+ ++SGG+ V P WI SI+ GKR P ++V G+ F A+ P TR+
Sbjct: 57 LFQGCNFYFNGHTGNVSSYNLIKMVKAHGGNTSIVHRKTRVTHVIATNLSGSKTDAVLRSGGRVHCVHPQWIVDSIEKGKRQPEAKYVVCKDFTVSSSGMTFFTPSIVPQASKPPTRS 174
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A6A5AQX6_9STRA (BRCT domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AQX6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 4.420e-13 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 106 IFQNCALFFNGRTGEGTALHLAARIQQHGGKT--VRSANKATHIIAENLSGSKTEKAVQSGGKTKVVRPDWITSSIDAGKRLPIHPFLV 366
+FQ C +FNGRTG ++ +L + HG T + + TH+IA NLSGSKTE +++GG+ V P WI SI+ GKR P ++V
Sbjct: 60 LFQGCNFYFNGRTGNVSSYYLIKMAKAHGAGTSIMHRKTRVTHVIATNLSGSKTEAVLKAGGRVHCVHPQWILDSIEKGKRQPEAKYVV 148
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A067BX51_SAPPC (BRCT domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BX51_SAPPC) HSP 1 Score: 77.4 bits (189), Expect = 4.760e-13 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 106 IFQNCALFFNGRTGEGTALHLAARIQQHGGKT--VRSANKATHIIAENLSGSKTEKAVQSGGKTKVVRPDWITSSIDAGKRLPIHPFLVIH--TQRRGLESFFGMAAVAATPPTT 438
IFQ C L+F+GRTG ++ ++ +++HG + + THI+AENL+GSKTE ++S GK V P+W+ SI GKR P + + +++FF PPTT
Sbjct: 48 IFQGCNLYFDGRTGNVSSYYMTKMVKEHGASVSIMHRKTRVTHIVAENLNGSKTEALLKSRGKILCVHPNWVLDSIKKGKRQPEFKYAIYKDAAAASSIQTFFQ-------PPTT 155
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A2R6QB68_9APHY (BRCT domain-containing protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6QB68_9APHY) HSP 1 Score: 76.6 bits (187), Expect = 3.800e-12 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 22 NGKGYLAIREEKLQEQAARPLPEKRA---AHIFQNCALFFNGRTGEGTALHLAARIQQHGGKTVRSANKATHII-AENLSGSKTEKAVQSGGKTKV--VRPDWITSSIDAGKRLPIHPFLVI 369
N K YL R +KL++Q LPE+ A + ++ +G T + + + GG+ + A++ATHI+ ++ LSGSKT+K + S K+KV VRP WIT SIDAGKRLP + I
Sbjct: 90 NQKSYLESRSKKLEDQ----LPERNTNAEAKVLSGVRVYIDGYLNISTDIEMKRIVTLAGGEILHIASRATHILTSQQLSGSKTQKILTSKSKSKVHVVRPQWITDSIDAGKRLPERKYAAI 207
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A0G4IYX9_PLABS (BRCT domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYX9_PLABS) HSP 1 Score: 74.3 bits (181), Expect = 9.120e-12 Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 106 IFQNCALFFNGRTGEGTALHLAARIQQHGGKT--VRSANKATHIIAENLSGSKTEKAVQSGGKTKV--VRPDWITSSIDAGKRLPIHPFLVIHTQRRGLESFF 402
+FQ ++FNGR+GE +AL L + ++ GG+ + S TH++ ENLS K+ K V SG K++V VRP+WI SI KR+ H + + ++ + SFF
Sbjct: 62 VFQGVCVYFNGRSGEFSALQLKSFVRLCGGRIAPMLSVKVVTHVVCENLSAIKSAKVVASGPKSRVHFVRPEWILDSIKGAKRVREHAYRAVSSRTTEITSFF 164
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Match: A0A0C3NPI8_PHLGI (BRCT domain-containing protein (Fragment) n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3NPI8_PHLGI) HSP 1 Score: 73.9 bits (180), Expect = 1.440e-11 Identity = 47/127 (37.01%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 22 NGKGYLAIREEKLQEQAARPLPEKRAAH---IFQNCALFFNGRTGEGTALHLAARIQQHGGKTVRSANKATHII-AENLSGSKTEKAVQSGGKTK----VVRPDWITSSIDAGKRLPIHPFLVIHTQ 378
N K YLA R +KL EQ LPE+ + H + + ++ +G T + + ++ GG+ + +A+ ATHI+ ++ LSG+KT+K + GK + VVRP+WIT SIDAGKRL + ++H +
Sbjct: 43 NHKPYLASRSKKLAEQ----LPEQDSNHEAGVLRGVRVYIDGYLANSTDIEMKRIVKLAGGEVLYAASGATHILTSQQLSGAKTQKILS--GKVRSIVHVVRPEWITDSIDAGKRLSERSYSLLHNK 163 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1079.1 >prot_S-ischiensis_contig1.1079.1 ID=prot_S-ischiensis_contig1.1079.1|Name=mRNA_S-ischiensis_contig1.1079.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=254bp IVKKSKWNGKGYLAIREEKLQEQAARPLPEKRAAHIFQNCALFFNGRTGEback to top mRNA from alignment at S-ischiensis_contig1:7465369..7469423- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1079.1 ID=mRNA_S-ischiensis_contig1.1079.1|Name=mRNA_S-ischiensis_contig1.1079.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4055bp|location=Sequence derived from alignment at S-ischiensis_contig1:7465369..7469423- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7465369..7469423- >mRNA_S-ischiensis_contig1.1079.1 ID=mRNA_S-ischiensis_contig1.1079.1|Name=mRNA_S-ischiensis_contig1.1079.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1524bp|location=Sequence derived from alignment at S-ischiensis_contig1:7465369..7469423- (Schizocladia ischiensis KU_0333)back to top |