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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 3 |
| Model size | 473 |
| Cds size | 471 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815386.6324277-CDS-S-ischiensis_contig1:704780..704885 | 1622815386.6324277-CDS-S-ischiensis_contig1:704780..704885 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 704781..704885 + |
| 1695739673.8089485-CDS-S-ischiensis_contig1:704780..704885 | 1695739673.8089485-CDS-S-ischiensis_contig1:704780..704885 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 704781..704885 + |
| 1622815386.6446877-CDS-S-ischiensis_contig1:705791..705998 | 1622815386.6446877-CDS-S-ischiensis_contig1:705791..705998 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 705792..705998 + |
| 1695739673.8171408-CDS-S-ischiensis_contig1:705791..705998 | 1695739673.8171408-CDS-S-ischiensis_contig1:705791..705998 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 705792..705998 + |
| 1622815386.657783-CDS-S-ischiensis_contig1:706721..706880 | 1622815386.657783-CDS-S-ischiensis_contig1:706721..706880 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 706722..706880 + |
| 1695739673.9023411-CDS-S-ischiensis_contig1:706721..706880 | 1695739673.9023411-CDS-S-ischiensis_contig1:706721..706880 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 706722..706880 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.107.1 >prot_S-ischiensis_contig1.107.1 ID=prot_S-ischiensis_contig1.107.1|Name=mRNA_S-ischiensis_contig1.107.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=157bp
DAAAAVVVRCGLVDGGVAVAALALPGTLPGAGAAKVLPFLPPGGLSMWHA
PRVTLLVVHRPRLDRAGGACYLSYTLTALKRALYVGDVVGLTLALPSQML
GDAGLTEVLDRLAWAQGRLDISYYRSTPLQAPTLPHGGSARDASQGHYGE
EEDPGGP back to topmRNA from alignment at S-ischiensis_contig1:704781..706882+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.107.1 ID=mRNA_S-ischiensis_contig1.107.1|Name=mRNA_S-ischiensis_contig1.107.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2102bp|location=Sequence derived from alignment at S-ischiensis_contig1:704781..706882+ (Schizocladia ischiensis KU_0333)
GACGCGGCGGCAGCGGTGGTGGTGCGCTGCGGGCTAGTGGACGGCGGGGT
GGCGGTGGCAGCGCTTGCTTTGCCGGGGACGCTCCCCGGGGCCGGGGCGG
CCAAGGTGAGAGGCAGAGGCGATTGGTTGGTTGGTCGGTCGCAGTGATGA
ATATCTAAGCAAGTCAACCTACTGTAGTTCTTGACAGTACTGATCTATTT
TGAGTGGTAGATAAGCGGCGAGTTCCAGGCCCCGTGCCAAAAGGCTCGTC
CCGAAACGGGACTCAACGAAGCCCTTCTTCCCCTCACAGGGCAAAAAGAA
AACAAAATACAAAGAAGGAACGGGGGGGGGCAGGGAAAAGGAAGGGGTGG
GGAAGGGGAGTCTCGTGTGCTCACGGTGGGGCATGCGGGTAGGGCGGGCG
GGGGCGAGACCGGACACGAAGTCTGAGACCACGACTGATCTATGCACCTA
TCAATAGTAGATATTCGATAGTTTGACCCACACTAAATCCAAGTAGTTAG
TAGCGCCACCCACAAAATCAGCCGAGCCCAGTAAGTATCTACTGATCGAT
ACTCCATCACTGGTCGGTCGTGGAGCATATATGGGCGTGACTAGTGTATA
CATACAAGTAGATGTATAGAGTACGGTACCCGGTCTTTTTAGCGAATGTG
TGTGACTATAGTATATGTGGTGCTCCAAGTAGGTACAAGTACTGTGCTTG
GGAAGCATGCTTGTACAGCATGTACTGTAGTAGCGAGGTGCTCGGAGTGC
AGTCTCACGCGCGAAGTGTGTGAAGTTGAGTGCCTGGAAGTAGCTAGTAT
ACTTCGAAGTACAGTAGTACACACGTTGCTCGCTGAAATTGAACTGAGTG
GGTAAGTGGCACCGGCGATCGGTGGCATGCACAGCACGCGGGGTAGTAGC
AACCCTGTCCGGCATGAGTGCACACTTTGAAGCACCGTGGTTGGGGAGCA
TGTGGCAGTCATGCTGAACTCACCATAGTCCCAACAACACCAATGACCAC
GAAAACGACAGGTGCTGCCCTTCCTGCCCCCGGGCGGCCTTTCCATGTGG
CACGCCCCCCGTGTCACCCTGCTGGTGGTGCACCGGCCCCGCCTGGACCG
CGCGGGCGGCGCCTGCTACCTCTCCTACACCCTCACGGCGCTCAAGCGTG
CCCTGTACGTTGGCGACGTGGTGGGCCTGACCCTGGCCCTGCCCTCCCAG
ATGCTCGGGGATGCCGGGGTGAGAGAACCGGGGGGCAAGTGGTTGATGGC
GTGGGAGTGCTGTTTACTACTAGTAGTAGTTTCATTCGCCTCTTCTGTTT
TGTTCTGTTCTGTGCTGTTCTGTTGTTTTCTGTTCTGTGCGGCTTGGACG
CCGCATGCATCTCTTTTTTTCTTTTTGTTTTCTTTTTCGGCCCCGCACGC
CTGACGGATGCGACGGAAGCGTGGACGCTCTGTCATCGACGACTCCCCTG
TTTGACCGCCGCTCCCCCCCCCCCTGACCATGTCGACAGATCATTTTGGT
ACCGTTCGAGTACTTCGAAGTGTACGTACAATACAGTATACGAGTACAGT
ACAAGTGCGAGCCCTAGTGTACTACAGTACTCGAGTACAGTAACAGTAGC
GGGGGGGAAAGTACTCAGTGGAGGATGAACAAGCTATGTTGGGTGTGGTC
CACGTCGCTCACGACCTCGGCAGCGGGCCCATGCTTCCACAGAGCGGAAG
GAGGCGCGTTCCGTGGTCATTTCTGCAGAAGCTAGGTTTATCATCCAATG
ATGAAGTACTCCAAATCCGCGTCTCTTTCTTTTATTCTCGGCGGTGTGAT
GAAGCGTCCCGCCTGCCCCAGGTGGCTTGCCTGGCGCCCCTGCTCGGAGA
CACTGTATGCCTCAACGTGGGCAGCCAAAGTCACCGAAGCCGCCCCCCCC
GCCCCCCCACCACCACCGCACGGCGCCAACCCCCCCGGTAGCTGACTGAG
GTGCTGGACCGACTGGCCTGGGCACAGGGCCGACTGGACATCTCCTACTA
CAGAAGCACGCCTCTCCAAGCCCCCACCTTGCCACACGGCGGCAGCGCCC
GCGACGCCTCCCAAGGACACTACGGGGAGGAGGAGGACCCCGGGGGCCCG
GG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:704781..706882+ >mRNA_S-ischiensis_contig1.107.1 ID=mRNA_S-ischiensis_contig1.107.1|Name=mRNA_S-ischiensis_contig1.107.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=942bp|location=Sequence derived from alignment at S-ischiensis_contig1:704781..706882+ (Schizocladia ischiensis KU_0333)
GACGCGGCGGCAGCGGTGGTGGTGCGCTGCGGGCTAGTGGACGGCGGGGT
GGCGGTGGCAGCGCTTGCTTTGCCGGGGACGCTCCCCGGGGCCGGGGCGG
CCAAGGACGCGGCGGCAGCGGTGGTGGTGCGCTGCGGGCTAGTGGACGGC
GGGGTGGCGGTGGCAGCGCTTGCTTTGCCGGGGACGCTCCCCGGGGCCGG
GGCGGCCAAGGTGCTGCCCTTCCTGCCCCCGGGCGGCCTTTCCATGTGGC
ACGCCCCCCGTGTCACCCTGCTGGTGGTGCACCGGCCCCGCCTGGACCGC
GCGGGCGGCGCCTGCTACCTCTCCTACACCCTCACGGCGCTCAAGCGTGC
CCTGTACGTTGGCGACGTGGTGGGCCTGACCCTGGCCCTGCCCTCCCAGA
TGCTCGGGGATGCCGGGGTGCTGCCCTTCCTGCCCCCGGGCGGCCTTTCC
ATGTGGCACGCCCCCCGTGTCACCCTGCTGGTGGTGCACCGGCCCCGCCT
GGACCGCGCGGGCGGCGCCTGCTACCTCTCCTACACCCTCACGGCGCTCA
AGCGTGCCCTGTACGTTGGCGACGTGGTGGGCCTGACCCTGGCCCTGCCC
TCCCAGATGCTCGGGGATGCCGGGCTGACTGAGGTGCTGGACCGACTGGC
CTGGGCACAGGGCCGACTGGACATCTCCTACTACAGAAGCACGCCTCTCC
AAGCCCCCACCTTGCCACACGGCGGCAGCGCCCGCGACGCCTCCCAAGGA
CACTACGGGGAGGAGGAGGACCCCGGGGGCCCGCTGACTGAGGTGCTGGA
CCGACTGGCCTGGGCACAGGGCCGACTGGACATCTCCTACTACAGAAGCA
CGCCTCTCCAAGCCCCCACCTTGCCACACGGCGGCAGCGCCCGCGACGCC
TCCCAAGGACACTACGGGGAGGAGGAGGACCCCGGGGGCCCG back to top
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