mRNA_S-ischiensis_contig1.1062.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A7S3UWF8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF8_HETAK) HSP 1 Score: 119 bits (298), Expect = 1.550e-28 Identity = 57/134 (42.54%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 FLQELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMS--INSDTVNATMAGTKILGRGDYFAEYAILLDAGKHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERFRELMSLL 396
FL +LGE+ + +LV RL+P LA+ G+ ++R+ G EMYF GG L+M + S+ V++ + L G+YFAEYA+++D KHP +VRA +CDLF L++++F G+ FP ++ +V+++G+ERF LM L
Sbjct: 195 FLADLGEDVVPLLVTRLRPMLAAHGDLIIREGMFGDEMYFVAGGTLRMEAEVYSNAVHSEEVLVRKLHVGEYFAEYAVIMDQPKHPISVRAAAYCDLFMLNRDNFNDFGEIFPEVYMKVIQMGRERFLTLMKEL 328
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A7S2V5J1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5J1_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.780e-26 Identity = 57/132 (43.18%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 1 FLQELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSINSDTVNATMAGTKILGRGDYFAEYAILLDAGKHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERFRELMSLL 396
FL+ELGE+ +S+LV++L+P LA G++VV + FVGREMY C G+L+ + +++N +G G FAEYA++L KHP ++RA CDLF L K DF+ + FP +V+ LG+ERF+ + L
Sbjct: 367 FLKELGEDIVSVLVMKLRPLLAPRGQNVVVEGFVGREMYICTKGELQSYVGKNSLNCFEFHISKIGPGQEFAEYALILKLVKHPVSIRATCPCDLFVLHKPDFDDLQYHFPLAHRKVIELGRERFKGQLQFL 498
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A7S3XN65_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN65_HETAK) HSP 1 Score: 99.4 bits (246), Expect = 9.580e-23 Identity = 48/110 (43.64%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 1 FLQELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMS--INSDTVNATMAGTKILGRGDYFAEYAILLDAGKHPATVRALGFCDLFTLSKEDFESVGK 324
FL +LGE+ + +LV RL+P LA+ G+ ++R+ G EMYF GG L+M + S+ V++ + L G+YFAEYA+++D KHP +VRA +CDLF L++E+F G+
Sbjct: 107 FLADLGEDVVPLLVTRLRPMLAAHGDLIIREGMFGDEMYFVAGGTLRMEAEVYSNAVHSEEVLVRKLHVGEYFAEYAVIMDQPKHPISVRAAAYCDLFMLNQENFHDFGE 216
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: UPI0009E5B413 (cyclic nucleotide-gated cation channel alpha-3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5B413) HSP 1 Score: 80.5 bits (197), Expect = 1.570e-14 Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 28 LSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSINSDTVNATMAGTKILGRGDYFAEYAILLDAG---KHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERFRE 381
L LV++LKP L SPG+ V R+D +GREMY G+L++ S TV A L G +F E +IL G + A+VR++GF DLF LSK+D E V +++P + +Q+ ++ ++ + +
Sbjct: 461 LRELVLKLKPMLCSPGDHVCRQDEIGREMYIVNQGELEVVNKSGTVLAK------LSAGRHFGEISILDMKGIGNRRTASVRSVGFSDLFRLSKKDLEEVIEYYPEVKDQLAKIARQTYEK 575
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A0V0JBZ6_SCHSO (Cyclic nucleotide-gated cation channel alpha-3 n=3 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0V0JBZ6_SCHSO) HSP 1 Score: 79.3 bits (194), Expect = 3.990e-14 Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 1
Query: 7 QELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSINSDTVNATMAGTKILGRGDYFAEYAIL---LDAGKHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERFRELMSLLTVPVPAGSLKWENSMRGDLKGN 462
Q+ E LS LV+RL+P L SPG+ + RK +GR+M+F G+L++ + +D VN L G YF E +IL + A+VR++G+ DLF LSKED V + FP ++ ++G R ++ + L + S +NS+ DL N
Sbjct: 449 QDAEEGFLSELVLRLRPALYSPGDYICRKGQIGRQMFFVTQGKLEV-LAADEVNVIAT----LSAGSYFGEISILNFGSIGNRRTASVRSIGYADLFCLSKEDLWDVLREFPAAKQRLEQVGLSRLQDAKAQLQL----SSACSDNSIIKDLPDN 594
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A3P6T4W1_DIBLA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Dibothriocephalus latus TaxID=60516 RepID=A0A3P6T4W1_DIBLA) HSP 1 Score: 74.3 bits (181), Expect = 4.230e-13 Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 7 QELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSINSDTVNATMAGTKILGRGDYFAEYAILLDAG---KHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKER 372
Q+ E LS LV+RL+P L SPG+ + RK +GR+M+F G+L++ + +D VN L G YF E +IL + A+VR++G+ DLF LSKED V + FP ++ + ER
Sbjct: 89 QDAEEGFLSELVLRLRPALYSPGDYICRKGQIGRQMFFVTQGKLEV-LAADEVNVIAT----LSAGSYFGEISILNFGNIGNRRTASVRSIGYADLFCLSKEDLWDVLREFPAAKEKLEQEDAER 208
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A7M3RLR9_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3RLR9_SPIER) HSP 1 Score: 75.9 bits (185), Expect = 6.340e-13 Identity = 48/140 (34.29%), Postives = 78/140 (55.71%), Query Frame = 1
Query: 7 QELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSINSDTVNATMAGTKILGRGDYFAEYAIL---LDAGKHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERFRELMSLLTVPVPAG 417
Q+ E LS LV+RL+P L SPG+ + RK +GR+M+F G+L++ + +D V+ L G YF E +IL + A+VR++G+ DLF LSKED V + +P ++ ++G R ++ + L + G
Sbjct: 452 QDAEEGFLSELVLRLRPALYSPGDYICRKGQIGRQMFFVTQGKLEV-LAADEVSVIAT----LSAGSYFGEISILNFGSIGNRRTASVRSIGYADLFCLSKEDLWDVLREYPAAKERLEQVGLSRLQDAKAQLQLSAADG 586
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: UPI001CF28663 (cyclic nucleotide-gated cation channel alpha-3-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF28663) HSP 1 Score: 75.9 bits (185), Expect = 6.900e-13 Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 28 LSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSINSDTVNATMAGTKILGRGDYFAEYAILLDAG---KHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERF 375
L LV++LKP L SPG+ V R+D +GREMY G+L++ S V A L G +F E +IL G + A+VR++GF DLF LSK+D E V +++P +++ ++ ++ +
Sbjct: 508 LRELVLKLKPMLCSPGDHVCRQDEIGREMYIVNNGELEVLDKSGAVLAK------LSAGRHFGEISILDMKGIGNRRTASVRSVGFSDLFRLSKKDLEEVIEYYPEEKDKLAKIARQTY 620
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A654H5K3_9CEST (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654H5K3_9CEST) HSP 1 Score: 74.7 bits (182), Expect = 1.680e-12 Identity = 46/128 (35.94%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 7 QELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSINSDTVNATMAGTKILGRGDYFAEYAIL---LDAGKHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERFRE 381
Q+ E LS LV+RL+P L SPG+ + RK +GR+M+F G+L++ + +D V+ L G YF E +IL + A+VR++G+ DLF LSKED V + +P ++ ++G R ++
Sbjct: 238 QDAEEGFLSELVLRLRPALYSPGDYICRKGQIGRQMFFVTQGKLEV-LAADEVSVIAT----LSAGSYFGEISILNFGSIGNRRTASVRSIGYADLFCLSKEDLWDVLREYPAAKERLEQVGLSRLQD 360
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Match: A0A820CLY4_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A820CLY4_9BILA) HSP 1 Score: 73.9 bits (180), Expect = 3.150e-12 Identity = 58/148 (39.19%), Postives = 83/148 (56.08%), Query Frame = 1
Query: 28 LSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLK-MSINSDTVNATMAGTKILGRGDYFAEYAIL-LDAG-KHPATVRALGFCDLFTLSKEDFESVGKFFPGLFNQVVRLGKERFRELMSLLTVPVPAGSLKWENSMRGDLKGN 462
L+ LV+RLKP L SPG+ + RK VGREMY G+L M+ N+ TV AT L G YF E +IL + +G + A+VR++G+ DLF LSKED V K +P + ++ + +R + L V +LK S G ++ N
Sbjct: 575 LNELVLRLKPVLFSPGDFICRKGEVGREMYIVNRGKLHVMADNNKTVLAT------LKAGSYFGEISILNMGSGNRRTASVRSVGYSDLFCLSKEDLWEVLKEYPAVRVKLEAIAVKRLEKHKKPLIQQV---NLKRSKSAPGLIEAN 713 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1062.1 >prot_S-ischiensis_contig1.1062.1 ID=prot_S-ischiensis_contig1.1062.1|Name=mRNA_S-ischiensis_contig1.1062.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=170bp FLQELGEECLSMLVVRLKPYLASPGEDVVRKDFVGREMYFCVGGQLKMSIback to top mRNA from alignment at S-ischiensis_contig1:7364333..7367774- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1062.1 ID=mRNA_S-ischiensis_contig1.1062.1|Name=mRNA_S-ischiensis_contig1.1062.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3442bp|location=Sequence derived from alignment at S-ischiensis_contig1:7364333..7367774- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7364333..7367774- >mRNA_S-ischiensis_contig1.1062.1 ID=mRNA_S-ischiensis_contig1.1062.1|Name=mRNA_S-ischiensis_contig1.1062.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1020bp|location=Sequence derived from alignment at S-ischiensis_contig1:7364333..7367774- (Schizocladia ischiensis KU_0333)back to top |