mRNA_S-ischiensis_contig1.1058.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A6H5L6B0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6B0_9PHAE) HSP 1 Score: 124 bits (312), Expect = 7.660e-30 Identity = 88/202 (43.56%), Postives = 118/202 (58.42%), Query Frame = 1
Query: 205 ARPSSRRGLHVS----MAEGGPKNIGSYYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRL--PGYEVGGSQLTSEALGVAAALALLAQAVLDRQKEVAVQRRREALAAASEAAAAEGQAVS-----GEVSFV-KPDLGIAAERRLRWVADVLLQLTPASVVVFFDKDGVLARIGVSGGESDEQSLLALALSRA 774
ARPS+ H + MA+ P + YRRPS AIERGGGF+VPGLEG++ R + ++L L+ L PG + QL S+ L A + L AQA+LD+QKE A + RREA+AAA A+A+G A+ G+V+F LG E ++ W AD+ LQLT A V F VLAR+G +GGESD +A A +A
Sbjct: 62 ARPSAAHRQHSNTLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLGVVILGLLSLEGFARPGMTI--FQLISKLLAGLAGVLLFAQALLDQQKERAFEMRREAIAAAP--ASAQGPAMGTAAGEGQVAFFDSAALGSDLEAKVMWAADIALQLTAACSFVMFSDGEVLARVGATGGESDASDTVAAAFKQA 259
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: W7TJU1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJU1_9STRA) HSP 1 Score: 105 bits (261), Expect = 9.420e-23 Identity = 66/170 (38.82%), Postives = 94/170 (55.29%), Query Frame = 1
Query: 196 IQRARPSSRRGLHVSMAEGGPKNIGSYYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRLPGYEVGGSQLTSEALGVAAALALLAQAVLDR---QKEVAVQRRREALAAASEAAAAEGQAVSGEVSFVKPDLGIAAERRLRWVADVLLQLTPASVVVFFDKD 696
++ RP R G ++ G S+Y+RPSKAIE GGGF++PGLEGY+LR+A + L+L L+ LNR PGY SQLTSEA+G AA+ LLAQA++++ + VA Q + + G+ E ++ P G A E +RWV L + V D +
Sbjct: 54 VESPRPPPRSG---GVSADGKAQKSSFYKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRYPGYTPAASQLTSEAIGAGAAVILLAQALIEKLITEAGVAQQEEEDNGGLKPKIGGRSGRTGGMEEEYLGPGPGSAMEDDVRWVGYALDENLNCPAVALLDSE 220
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A7S3XMP2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMP2_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 3.400e-22 Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 256 PKNIGSYYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRLPGYEVGGSQLTSEALGVAAALALLAQAVLDR 492
PKN+ YYRRPS A+ERGGGF+VPGLEG RL++ V+ L +AL+GLNR PGYE SQL SE LG+ AAL L Q L R
Sbjct: 72 PKNLAGYYRRPSAALERGGGFFVPGLEGGRLQILVACLGVALLGLNRFPGYEPVQSQLNSEVLGICAALITLMQIALQR 150
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A7S0LMB5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LMB5_9EUKA) HSP 1 Score: 90.9 bits (224), Expect = 1.150e-17 Identity = 66/142 (46.48%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 256 PKNIGSYYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRLPGYEVGGSQLTSEALGVAAALALLAQAVLDRQKEVAVQRRREALAAASEAAAAEGQAVSGEVSFVKPDLGIAAERRLRWVADVLLQLTPASVVV 681
PK SYY+RP+ A+ERGGGFYVPGLEG RLR+A + +L + LNR+ V SQL SE LG AA L Q DR E RE A AA A Q E S V P L A +VA +L+LTPAS V+
Sbjct: 82 PKVKSSYYKRPAAALERGGGFYVPGLEGNRLRLAAACVLSLALLLNRIASQGVTSSQLVSEVLGAAACALLFIQVFSDRLAE-----SREIDQAGRAAATARLQ----EKSEVSPLLSEAQAEDATFVAATVLKLTPASFVM 214
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A7S0NDC4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NDC4_9CRYP) HSP 1 Score: 85.9 bits (211), Expect = 3.930e-16 Identity = 57/151 (37.75%), Postives = 80/151 (52.98%), Query Frame = 1
Query: 274 YYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNR--LPGYEVGGSQLTSEALGVAAALALLAQAVLDRQKEVAVQRRREALAAASEAAAAEGQAVSGEVSFVKPDLGIAAERRLRWVADVLLQLTPASV-VVFFDKDGVLARIG 717
+Y RPSKA+E+GGGFYVPGLEGY+L++AVS L L+ +NR LPGY+ +Q TSEA+ V AL +L Q++LD+ + + EA G +F +L RL W Q S V+ + G++A G
Sbjct: 57 FYVRPSKALEKGGGFYVPGLEGYKLKLAVSVLAFFLLTMNRVLLPGYQPTINQQTSEAVVVFTALFILVQSLLDKTMQEGGEEENEA----------PGSVARARRTFTSVELDETQRERLTWQLAAFKQAVSQSTQVMIWSDQGMIAADG 197
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: L1JN20_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JN20_GUITC) HSP 1 Score: 83.6 bits (205), Expect = 4.690e-16 Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 274 YYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNR--LPGYEVGGSQLTSEALGVAAALALLAQAVLDR 492
+Y RPSKA+E+GGGFYVPGLEGY+L++AVS L +L+ +NR LPGY+ +Q TSEA+ V AL +L Q++LD+
Sbjct: 53 FYVRPSKALEKGGGFYVPGLEGYKLKLAVSVLAFSLLAINRVLLPGYQPTINQQTSEAVVVFTALFILIQSLLDK 127
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A7S4B697_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B697_CHRCT) HSP 1 Score: 86.7 bits (213), Expect = 5.540e-16 Identity = 62/160 (38.75%), Postives = 84/160 (52.50%), Query Frame = 1
Query: 271 SYYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRLPGYEVGGSQLTSEALGVAAALALLAQAVLDRQKEVAVQRRREALAAASEAAAAEGQAVSGEVSFVKPDLGIAAERRLRWVADVLLQLTPASVVVFFDKD-----------GVLARIG 717
SYY+RP+ A+ERGGGFY+PGLEGYRLR+ V ++L A + NR+ E SQ SE LG + L L Q DR E RRE A + + + Q ++ ++ D +A W+A LL+L PA VV+ D + GVL R G
Sbjct: 103 SYYKRPAAALERGGGFYIPGLEGYRLRLLVGSVLSAALVANRITSPEPSVSQFVSEGLGGFSCLLLFIQVAADRAAEE--DDRRELARAIATSRMEDRQQLAAQL-----DARVA--EHAEWLARALLRLLPADVVMLLDGEALQTAGEHELPGVLLRFG 253
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A0M0KAE8_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KAE8_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 1.060e-15 Identity = 67/150 (44.67%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 277 YRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRL--PGYEVGGSQLTSEALGVAAALALLAQAVLDRQKEVAVQRRREALAAASEAAAAEGQAVSGEVSFVKPDLGIAAERRLRWVADVLLQLTPASVVVFFDKDG-VLARIG 717
YRRPS A+E+GG F+VPGLEG +LR +A+L + LNR+ PG V SQ SEALGV + L + AQ+ Q V + +AL AA A E Q + + +AAER RWVA LL+ TPA V+ DG VLAR G
Sbjct: 12 YRRPSAALEQGGSFFVPGLEGTKLRTGAAAVLSVGLLLNRILSPGEPVS-SQYVSEALGVFSCLIVFAQSAA--QNRVDAEAAEDALRAAFAARLKERQ------EYAESLTPLAAERT-RWVATTLLKTTPARAAVWVGADGTVLARCG 151
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A7S0NXR1_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXR1_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 2.380e-15 Identity = 66/162 (40.74%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 205 ARPSSRRGLHVSMAEGGPKNIGSYYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRLPGYEVGGSQLTSEALGVAAALALLAQAVLDRQKEVAVQRRREALAAASEAAAAEGQAVSGEVSFVKPDLGIAAERRLRWVADVLLQLTPASVVVFFD 690
A+P +R V MA PK YY+RP+ A+ERGGGFYVPGLEG RLR+ V+++L + +N + V SQL SEALG A L + Q LD +E RR +A E A A A E V L + ++V+ L LTPAS+V+ D
Sbjct: 48 AQPHARARPPVLMAPP-PKVKPGYYKRPAAAVERGGGFYVPGLEGSRLRLFVASVLSIALVVNHVFSAGVAPSQLGSEALGSCACLLIFVQVALDNFEE----RREQA-----ETARALATARLEEKLEVSESLPASHAEAAQFVSSTTLALTPASLVLLLD 199
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Match: A0A8J5XEF3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEF3_DIALT) HSP 1 Score: 80.1 bits (196), Expect = 7.970e-14 Identity = 67/194 (34.54%), Postives = 89/194 (45.88%), Query Frame = 1
Query: 178 GAARTGIQRARPSSRRGLHVSMAEGGPKNIGSYYRRPSKAIERGGGFYVPGLEGYRLRVAVSALLLALIGLNRLPGYE-VGGSQLTSEALGVAAALALLAQAVLDRQKEVAVQRRREALAAASEAAAAEGQAVSG-EVSFVKPDLGIAAERRLRWVADVLLQLTPASVVVFFDKDGVLARIGVSGGESDEQSLL 753
GA G+ RA PS V +A P GS+YRRP+KA+ERGGGFYVPGLEG RLR+A + L+ A I N + + + Q SEA+G A L QA ++R A R E A A +A++ +++ LG A W L A + G L VS S + L
Sbjct: 26 GAQARGLARAVPSHAHAARV-VATAPPPVSGSFYRRPAKALERGGGFYVPGLEGDRLRIAAATLVSAAIVANHVTSSQPLAEQQQASEAIGAFLAAYTLVQAAVERATAAASGRAAEKRKATLAVVDAGTEALASLDLAASASTLGERAAAEFGWAGRATLDSIAADALFLVSTSGALLASWVSPSASSLPAQL 218 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1058.1 >prot_S-ischiensis_contig1.1058.1 ID=prot_S-ischiensis_contig1.1058.1|Name=mRNA_S-ischiensis_contig1.1058.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=269bp AAPQLKLLPAAMTPRGAWIGLLAAVLVIRGTSAWSRGSLGSLHVHGASCAback to top mRNA from alignment at S-ischiensis_contig1:7328344..7332342- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1058.1 ID=mRNA_S-ischiensis_contig1.1058.1|Name=mRNA_S-ischiensis_contig1.1058.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3999bp|location=Sequence derived from alignment at S-ischiensis_contig1:7328344..7332342- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7328344..7332342- >mRNA_S-ischiensis_contig1.1058.1 ID=mRNA_S-ischiensis_contig1.1058.1|Name=mRNA_S-ischiensis_contig1.1058.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1614bp|location=Sequence derived from alignment at S-ischiensis_contig1:7328344..7332342- (Schizocladia ischiensis KU_0333)back to top |