mRNA_S-ischiensis_contig1.1051.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI) HSP 1 Score: 270 bits (689), Expect = 1.820e-88 Identity = 136/225 (60.44%), Postives = 165/225 (73.33%), Query Frame = 1
Query: 1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
MYSTKR+NKN V+GN FI++GDP+ + RLP RWK KQF + P NA +G F KL YSSE F ETE++ KTQPLSKR LGFGTKDAFKRGEFTATIRT+QYRE ++ E +LM +R V++E V +A K ++RRFV GK E+K+LYD+GR+L NEF+P D FY F GKR G YRTM+ DIG AW+H+ APEFGP HIK+F DRSHLEV G
Sbjct: 1 MYSTKRVNKNIVEGNRFISVGDPYKEL--RRLPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 223
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA) HSP 1 Score: 218 bits (554), Expect = 3.410e-68 Identity = 119/225 (52.89%), Postives = 149/225 (66.22%), Query Frame = 1
Query: 1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
MYSTKR+N +G +I++GDP+ T LP RWK K F V + P NA++G F+KL Y S F E E+Y KTQP RK GFGTKDAF+RGEFTATIRTEQYR+ ++ E +MA + I++RA EK+ +TR F G E +LYD+GRT V +FDPK SRD FY +R G +RTM+ DIG+ AW HKY++PEFGP H K F DRSHL V G
Sbjct: 1 MYSTKRVNDKIAEG--YISVGDPYRGTKDT-LPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQEMERYSKTQP--DRKKGFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDINRERRMGGFRTMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTVEG 220
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI) HSP 1 Score: 210 bits (535), Expect = 2.130e-65 Identity = 107/212 (50.47%), Postives = 143/212 (67.45%), Query Frame = 1
Query: 34 VDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEV 669
VDG ++I+IGD + LP RWK K V + P+NA++G F++L Y SE + + EK+ KTQPL KRKLGFGTKDAF+ GEFTATIRTEQYR+ ++ E +M +R +++A Q+ + R F G E+++LYD+GR+ V EFDPK+SRD FY S G KR G YRTM+ DIG AW H Y++PE GP H+K F D+SHL +
Sbjct: 2 VDGGSYISIGDMYKGN-KIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSIGQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSL 212
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA) HSP 1 Score: 208 bits (529), Expect = 2.300e-64 Identity = 112/226 (49.56%), Postives = 146/226 (64.60%), Query Frame = 1
Query: 1 MYSTKRINKNNVDGNA-FITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
MY T R +KN +D +A ++TIGDP+ D T +P RWK KQF V +P Q GYF + Y E++ E E Y K+QP +RK GFG+ DA +RGEFT+TIRTEQYRET+K E ++ R E E ++ A E R R F G TE ++LYDIG+ V EFDP+SSRDTFY KR G + T S +G+ AW+HKY PEFGP ++K+F DRSHL++ G
Sbjct: 1 MYRTHRTHKNLLDKDASYVTIGDPYIDPNRT-IPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYKEMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIAAE-REMGRTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRKDRPKRLGAHTTSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQIEG 224
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK) HSP 1 Score: 205 bits (522), Expect = 2.480e-63 Identity = 110/226 (48.67%), Postives = 144/226 (63.72%), Query Frame = 1
Query: 1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
MY+TKRINKN +D ++I+I DP+ + + +LP RWK KQF V P GYF K Y+ + + E + K QP RKLGFGTKDA KRGEFTATIRTEQYRET+K E +++ + R E ++RA KR R F G +E + LYDIGR V +FDP+ SRDTFY KR G ++T +A +G AW+H+Y PEFGP ++K+F D+ HL GF
Sbjct: 1 MYATKRINKNKIDV-SYISIQDPYVE--NRKLPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVHFIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERA-RKREEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRKDRPKRLGHHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHLGTQGF 222
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: F0YHZ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ6_AURAN) HSP 1 Score: 194 bits (493), Expect = 7.520e-59 Identity = 113/233 (48.50%), Postives = 146/233 (62.66%), Query Frame = 1
Query: 1 MYSTKRINKN-NVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYF----TKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRN-NTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLG--KRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
MY+TK +NKN VD +IT+GDP+ +LP RWK KQFHV + P NA +GYF +Y SE + E Y KTQP KRKLGFGT DA +R EF+ TIRTEQYRET+K E + ANN +E+ ++ ++K N ++FV K E+ LYD+GR++ EFDPK+ RD FY G KR G RT S DIG+ AW KY PEF S +K+F D+SHL++ G
Sbjct: 1 MYTTKFMNKNVTVDNGRYITVGDPYIGT-KDKLPLRWKEKQFHVPQVPSNAGEGYFGFSGKAFSYQSELYTEQRPYMKTQPPDKRKLGFGTHDASRRDEFSQTIRTEQYRETLKKEGR--ANNNGYDED--AIEELMKKENAKVKKFVETKKEIGNLYDVGRSIHTEFDPKNGRDQFYSMKHGYTYEKRMGNNRTASQDIGDGAWNFKYSKPEFSAPSQVKNFFDQSHLDIGG 228
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A7S2CP23_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP23_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.840e-57 Identity = 116/244 (47.54%), Postives = 148/244 (60.66%), Query Frame = 1
Query: 1 MYSTK-RINKNNVD------GNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLN----YSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFY--KFSTGL-----GKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
MYSTK NKN V+ + +I+IGDP+ DR +LP RWK QF +DR P+NA +GYF N Y+S+ + ET Y QP KR +GFGTKDA KR EF ATIRTEQYRET+K E+ ++ R E+E A++++ RN FV G TE +YLYDIGRT F+PKS+ D FY + + L R G Y T S+ IG AWE Y P+FG S K+F+D+SHL V GF
Sbjct: 1 MYSTKIASNKNAVEMGDTKPHDKYISIGDPYVDRVG-KLPERWKKPQFQIDRMPKNAGNGYFGYNNKDFTYASDPYKETRSYKAEQPPEKRTMGFGTKDASKRDEFAATIRTEQYRETLKRENTILDEQRDREKEAALMEKL---RNTKSEFVPGLTETEYLYDIGRTQSTPFNPKSAGDRFYQRRLNKDLDPKQGSMRLGPYMTSSSQIGTGAWETPYSKPQFGTVSPTKNFNDKSHLSVAGF 240
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV) HSP 1 Score: 182 bits (461), Expect = 7.360e-54 Identity = 109/243 (44.86%), Postives = 147/243 (60.49%), Query Frame = 1
Query: 1 MYSTKRINKNNVDGN---AFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHE-TEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKT--EVKYLYDIGRTLVNEFDPKSSRDTFYKFST---------GLG--KRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
MYSTK I+KN ++ N + +IGDP+ + LPSRWK KQF + P+NA +G F K Y+ + + E E+Y KTQPL KR+LGFG+ DAFK GEFT+ TE+YR V+ E KL+ + R E ++Q+ ++ T + GK E K+LYD+GRT V + P+S+RD+FYK GL +R G +R MSA IGE AW HKY PEFG +I+ F DR H+E GF
Sbjct: 1 MYSTKSIHKN-INPNYQQTYTSIGDPYRNSVE-ELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRDRPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKLPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHIECKGF 241
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A482RVI8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI8_9ARCH) HSP 1 Score: 164 bits (414), Expect = 7.410e-47 Identity = 99/237 (41.77%), Postives = 142/237 (59.92%), Query Frame = 1
Query: 1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQ---FHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEE-------EEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEY-RTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
MYS+K ++K+ V NA+IT+GDP++D + K ++ F PQNA+ GYFTK +Y E + E KY TQPL +RKLGFGTKDA KR EF++ RTEQYRET++ E ++ + V+E E A + A + R T GG ++ YDIGRT V +F+PK++RD FY+F G+ G+ + +S ++G AWE +Y P FG +K+F D+SHL+ F
Sbjct: 1 MYSSKLVHKSMVANNAYITVGDPYHDPKANPFRQGKKGEKLTPFQSKGIPQNAELGYFTKKSYVPEGYKEGIKYITTQPLDQRKLGFGTKDAHKRDEFSSNNRTEQYRETLRKEKEMAESPEVVKEKLTKLLAERATMDFATQTRY-TNTLSGGPKRIRQ-YDIGRTQVTDFNPKATRDKFYRFDEEHGRYFGDLAQPISCEVGAAAWETQYRPPAFGGKGEVKNFFDKSHLQTQSF 235
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: B8BXP8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXP8_THAPS) HSP 1 Score: 145 bits (367), Expect = 6.950e-40 Identity = 89/221 (40.27%), Postives = 131/221 (59.28%), Query Frame = 1
Query: 1 MYSTKRINKNNVDGN---AFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHE-TEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTE-VKYLYDIGRTLVNEFDPKSSRDTFYKF-------STGLG----KRTGEYRTMSADIGETAWEHKYEAPE 615
MYSTK I+KN ++ N + +IGDP+N RLP RWK KQF + P+NA +G+F KL Y S+ + E +E+Y KTQPL RKLGFG++D K GEFT T++YR VK E+KL+ +R +E+ ++ + + R G + + K+++DIGR+ V ++P S+ D+FY S G +R G +R S IGE AW++ Y+ PE
Sbjct: 1 MYSTKSIHKN-INPNYRQTYTSIGDPYNGN-GERLPGRWKEKQFFTQKHPKNADNGFFVKLKYQSDPYTEISEQYSKTQPLDSRKLGFGSRDVSKSGEFTCYKATQRYRSVVKQENKLLQLHRNDSKEKELLGKPKDPTLPPRDRNGRELKSAKFMFDIGRSCVTAYNPNSAYDSFYNLPKHAPVESNWQGNDPIRRLGSHRPSSTTIGEHAWKYGYQKPE 219 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1051.1 >prot_S-ischiensis_contig1.1051.1 ID=prot_S-ischiensis_contig1.1051.1|Name=mRNA_S-ischiensis_contig1.1051.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=227bp MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAback to top mRNA from alignment at S-ischiensis_contig1:7275390..7279206- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1051.1 ID=mRNA_S-ischiensis_contig1.1051.1|Name=mRNA_S-ischiensis_contig1.1051.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3817bp|location=Sequence derived from alignment at S-ischiensis_contig1:7275390..7279206- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7275390..7279206- >mRNA_S-ischiensis_contig1.1051.1 ID=mRNA_S-ischiensis_contig1.1051.1|Name=mRNA_S-ischiensis_contig1.1051.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1362bp|location=Sequence derived from alignment at S-ischiensis_contig1:7275390..7279206- (Schizocladia ischiensis KU_0333)back to top |