mRNA_S-ischiensis_contig1.1051.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.1051.1
Unique NamemRNA_S-ischiensis_contig1.1051.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 1.820e-88
Identity = 136/225 (60.44%), Postives = 165/225 (73.33%), Query Frame = 1
Query:    1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
            MYSTKR+NKN V+GN FI++GDP+ +    RLP RWK KQF  +  P NA +G F KL YSSE F ETE++ KTQPLSKR LGFGTKDAFKRGEFTATIRT+QYRE ++ E +LM  +R V++E   V +A  K  ++RRFV GK E+K+LYD+GR+L NEF+P    D FY F    GKR G YRTM+ DIG  AW+H+  APEFGP  HIK+F DRSHLEV G
Sbjct:    1 MYSTKRVNKNIVEGNRFISVGDPYKEL--RRLPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 223          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.410e-68
Identity = 119/225 (52.89%), Postives = 149/225 (66.22%), Query Frame = 1
Query:    1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
            MYSTKR+N    +G  +I++GDP+     T LP RWK K F V + P NA++G F+KL Y S  F E E+Y KTQP   RK GFGTKDAF+RGEFTATIRTEQYR+ ++ E  +MA       +  I++RA EK+ +TR F  G  E  +LYD+GRT V +FDPK SRD FY       +R G +RTM+ DIG+ AW HKY++PEFGP  H K F DRSHL V G
Sbjct:    1 MYSTKRVNDKIAEG--YISVGDPYRGTKDT-LPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQEMERYSKTQP--DRKKGFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDINRERRMGGFRTMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTVEG 220          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 2.130e-65
Identity = 107/212 (50.47%), Postives = 143/212 (67.45%), Query Frame = 1
Query:   34 VDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEV 669
            VDG ++I+IGD +       LP RWK K   V + P+NA++G F++L Y SE + + EK+ KTQPL KRKLGFGTKDAF+ GEFTATIRTEQYR+ ++ E  +M  +R   +++A  Q+  +     R F  G  E+++LYD+GR+ V EFDPK+SRD FY  S G  KR G YRTM+ DIG  AW H Y++PE GP  H+K F D+SHL +
Sbjct:    2 VDGGSYISIGDMYKGN-KIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSIGQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSL 212          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.300e-64
Identity = 112/226 (49.56%), Postives = 146/226 (64.60%), Query Frame = 1
Query:    1 MYSTKRINKNNVDGNA-FITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
            MY T R +KN +D +A ++TIGDP+ D   T +P RWK KQF V  +P   Q GYF +  Y  E++ E E Y K+QP  +RK GFG+ DA +RGEFT+TIRTEQYRET+K E ++    R  E E  ++  A E R   R F  G TE ++LYDIG+  V EFDP+SSRDTFY       KR G + T S  +G+ AW+HKY  PEFGP  ++K+F DRSHL++ G
Sbjct:    1 MYRTHRTHKNLLDKDASYVTIGDPYIDPNRT-IPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYKEMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIAAE-REMGRTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRKDRPKRLGAHTTSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQIEG 224          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK)

HSP 1 Score: 205 bits (522), Expect = 2.480e-63
Identity = 110/226 (48.67%), Postives = 144/226 (63.72%), Query Frame = 1
Query:    1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
            MY+TKRINKN +D  ++I+I DP+ +  + +LP RWK KQF V   P     GYF K  Y+ + + E   + K QP   RKLGFGTKDA KRGEFTATIRTEQYRET+K E +++ + R    E   ++RA  KR   R F  G +E + LYDIGR  V +FDP+ SRDTFY       KR G ++T +A +G  AW+H+Y  PEFGP  ++K+F D+ HL   GF
Sbjct:    1 MYATKRINKNKIDV-SYISIQDPYVE--NRKLPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVHFIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERA-RKREEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRKDRPKRLGHHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHLGTQGF 222          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: F0YHZ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ6_AURAN)

HSP 1 Score: 194 bits (493), Expect = 7.520e-59
Identity = 113/233 (48.50%), Postives = 146/233 (62.66%), Query Frame = 1
Query:    1 MYSTKRINKN-NVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYF----TKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRN-NTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLG--KRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHG 675
            MY+TK +NKN  VD   +IT+GDP+      +LP RWK KQFHV + P NA +GYF       +Y SE + E   Y KTQP  KRKLGFGT DA +R EF+ TIRTEQYRET+K E +  ANN   +E+   ++  ++K N   ++FV  K E+  LYD+GR++  EFDPK+ RD FY    G    KR G  RT S DIG+ AW  KY  PEF   S +K+F D+SHL++ G
Sbjct:    1 MYTTKFMNKNVTVDNGRYITVGDPYIGT-KDKLPLRWKEKQFHVPQVPSNAGEGYFGFSGKAFSYQSELYTEQRPYMKTQPPDKRKLGFGTHDASRRDEFSQTIRTEQYRETLKKEGR--ANNNGYDED--AIEELMKKENAKVKKFVETKKEIGNLYDVGRSIHTEFDPKNGRDQFYSMKHGYTYEKRMGNNRTASQDIGDGAWNFKYSKPEFSAPSQVKNFFDQSHLDIGG 228          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A7S2CP23_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP23_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.840e-57
Identity = 116/244 (47.54%), Postives = 148/244 (60.66%), Query Frame = 1
Query:    1 MYSTK-RINKNNVD------GNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLN----YSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFY--KFSTGL-----GKRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
            MYSTK   NKN V+       + +I+IGDP+ DR   +LP RWK  QF +DR P+NA +GYF   N    Y+S+ + ET  Y   QP  KR +GFGTKDA KR EF ATIRTEQYRET+K E+ ++   R  E+E A++++    RN    FV G TE +YLYDIGRT    F+PKS+ D FY  + +  L       R G Y T S+ IG  AWE  Y  P+FG  S  K+F+D+SHL V GF
Sbjct:    1 MYSTKIASNKNAVEMGDTKPHDKYISIGDPYVDRVG-KLPERWKKPQFQIDRMPKNAGNGYFGYNNKDFTYASDPYKETRSYKAEQPPEKRTMGFGTKDASKRDEFAATIRTEQYRETLKRENTILDEQRDREKEAALMEKL---RNTKSEFVPGLTETEYLYDIGRTQSTPFNPKSAGDRFYQRRLNKDLDPKQGSMRLGPYMTSSSQIGTGAWETPYSKPQFGTVSPTKNFNDKSHLSVAGF 240          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV)

HSP 1 Score: 182 bits (461), Expect = 7.360e-54
Identity = 109/243 (44.86%), Postives = 147/243 (60.49%), Query Frame = 1
Query:    1 MYSTKRINKNNVDGN---AFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHE-TEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKT--EVKYLYDIGRTLVNEFDPKSSRDTFYKFST---------GLG--KRTGEYRTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
            MYSTK I+KN ++ N    + +IGDP+ +     LPSRWK KQF   + P+NA +G F K  Y+ + + E  E+Y KTQPL KR+LGFG+ DAFK GEFT+   TE+YR  V+ E KL+ + R    E  ++Q+  ++   T +   GK   E K+LYD+GRT V  + P+S+RD+FYK            GL   +R G +R MSA IGE AW HKY  PEFG   +I+ F DR H+E  GF
Sbjct:    1 MYSTKSIHKN-INPNYQQTYTSIGDPYRNSVE-ELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRDRPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKLPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHIECKGF 241          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: A0A482RVI8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI8_9ARCH)

HSP 1 Score: 164 bits (414), Expect = 7.410e-47
Identity = 99/237 (41.77%), Postives = 142/237 (59.92%), Query Frame = 1
Query:    1 MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQ---FHVDRRPQNAQDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEE-------EEAIVQRALEKRNNTRRFVGGKTEVKYLYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEY-RTMSADIGETAWEHKYEAPEFGPTSHIKHFSDRSHLEVHGF 678
            MYS+K ++K+ V  NA+IT+GDP++D  +       K ++   F     PQNA+ GYFTK +Y  E + E  KY  TQPL +RKLGFGTKDA KR EF++  RTEQYRET++ E ++  +   V+E       E A +  A + R  T    GG   ++  YDIGRT V +F+PK++RD FY+F    G+  G+  + +S ++G  AWE +Y  P FG    +K+F D+SHL+   F
Sbjct:    1 MYSSKLVHKSMVANNAYITVGDPYHDPKANPFRQGKKGEKLTPFQSKGIPQNAELGYFTKKSYVPEGYKEGIKYITTQPLDQRKLGFGTKDAHKRDEFSSNNRTEQYRETLRKEKEMAESPEVVKEKLTKLLAERATMDFATQTRY-TNTLSGGPKRIRQ-YDIGRTQVTDFNPKATRDKFYRFDEEHGRYFGDLAQPISCEVGAAAWETQYRPPAFGGKGEVKNFFDKSHLQTQSF 235          
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Match: B8BXP8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXP8_THAPS)

HSP 1 Score: 145 bits (367), Expect = 6.950e-40
Identity = 89/221 (40.27%), Postives = 131/221 (59.28%), Query Frame = 1
Query:    1 MYSTKRINKNNVDGN---AFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNAQDGYFTKLNYSSEKFHE-TEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIRTEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTE-VKYLYDIGRTLVNEFDPKSSRDTFYKF-------STGLG----KRTGEYRTMSADIGETAWEHKYEAPE 615
            MYSTK I+KN ++ N    + +IGDP+N     RLP RWK KQF   + P+NA +G+F KL Y S+ + E +E+Y KTQPL  RKLGFG++D  K GEFT    T++YR  VK E+KL+  +R   +E+ ++ +  +     R   G + +  K+++DIGR+ V  ++P S+ D+FY         S   G    +R G +R  S  IGE AW++ Y+ PE
Sbjct:    1 MYSTKSIHKN-INPNYRQTYTSIGDPYNGN-GERLPGRWKEKQFFTQKHPKNADNGFFVKLKYQSDPYTEISEQYSKTQPLDSRKLGFGSRDVSKSGEFTCYKATQRYRSVVKQENKLLQLHRNDSKEKELLGKPKDPTLPPRDRNGRELKSAKFMFDIGRSCVTAYNPNSAYDSFYNLPKHAPVESNWQGNDPIRRLGSHRPSSTTIGEHAWKYGYQKPE 219          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FNL0_ECTSI1.820e-8860.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAI9_9STRA3.410e-6852.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5S6_ECTSI2.130e-6550.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XZN8_9STRA2.300e-6449.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1R9I1_HETAK2.480e-6348.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YHZ6_AURAN7.520e-5948.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2CP23_9STRA4.840e-5747.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2EF12_TRICV7.360e-5444.86Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A482RVI8_9ARCH7.410e-4741.77Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
B8BXP8_THAPS6.950e-4040.27Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7275390..7279206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score272.7
Seed ortholog evalue1.5e-70
Seed eggNOG ortholog2880.D7FNL0
EggNOG OGs290NK@1,2S4NB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size681
Cds size681
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1051.1prot_S-ischiensis_contig1.1051.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 7275390..7279206 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815479.369711-CDS-S-ischiensis_contig1:7275389..72754701622815479.369711-CDS-S-ischiensis_contig1:7275389..7275470Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7275390..7275470 -
1695739725.370229-CDS-S-ischiensis_contig1:7275389..72754701695739725.370229-CDS-S-ischiensis_contig1:7275389..7275470Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7275390..7275470 -
1622815479.3812766-CDS-S-ischiensis_contig1:7276156..72762281622815479.3812766-CDS-S-ischiensis_contig1:7276156..7276228Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7276157..7276228 -
1695739725.380266-CDS-S-ischiensis_contig1:7276156..72762281695739725.380266-CDS-S-ischiensis_contig1:7276156..7276228Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7276157..7276228 -
1622815479.3906085-CDS-S-ischiensis_contig1:7277178..72773401622815479.3906085-CDS-S-ischiensis_contig1:7277178..7277340Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7277179..7277340 -
1695739725.388635-CDS-S-ischiensis_contig1:7277178..72773401695739725.388635-CDS-S-ischiensis_contig1:7277178..7277340Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7277179..7277340 -
1622815479.4009674-CDS-S-ischiensis_contig1:7278187..72782391622815479.4009674-CDS-S-ischiensis_contig1:7278187..7278239Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7278188..7278239 -
1695739725.3970773-CDS-S-ischiensis_contig1:7278187..72782391695739725.3970773-CDS-S-ischiensis_contig1:7278187..7278239Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7278188..7278239 -
1622815479.4166396-CDS-S-ischiensis_contig1:7278636..72788131622815479.4166396-CDS-S-ischiensis_contig1:7278636..7278813Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7278637..7278813 -
1695739725.4053402-CDS-S-ischiensis_contig1:7278636..72788131695739725.4053402-CDS-S-ischiensis_contig1:7278636..7278813Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7278637..7278813 -
1622815479.4270515-CDS-S-ischiensis_contig1:7279069..72792061622815479.4270515-CDS-S-ischiensis_contig1:7279069..7279206Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7279070..7279206 -
1695739725.4134986-CDS-S-ischiensis_contig1:7279069..72792061695739725.4134986-CDS-S-ischiensis_contig1:7279069..7279206Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7279070..7279206 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.1051.1

>prot_S-ischiensis_contig1.1051.1 ID=prot_S-ischiensis_contig1.1051.1|Name=mRNA_S-ischiensis_contig1.1051.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=227bp
MYSTKRINKNNVDGNAFITIGDPFNDRYSTRLPSRWKSKQFHVDRRPQNA
QDGYFTKLNYSSEKFHETEKYGKTQPLSKRKLGFGTKDAFKRGEFTATIR
TEQYRETVKHEHKLMANNRRVEEEEAIVQRALEKRNNTRRFVGGKTEVKY
LYDIGRTLVNEFDPKSSRDTFYKFSTGLGKRTGEYRTMSADIGETAWEHK
YEAPEFGPTSHIKHFSDRSHLEVHGF*
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mRNA from alignment at S-ischiensis_contig1:7275390..7279206-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.1051.1 ID=mRNA_S-ischiensis_contig1.1051.1|Name=mRNA_S-ischiensis_contig1.1051.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3817bp|location=Sequence derived from alignment at S-ischiensis_contig1:7275390..7279206- (Schizocladia ischiensis KU_0333)
ATGTACTCCACCAAGAGGATCAACAAGAACAACGTTGATGGCAACGCGTT CATTACAATCGGGGATCCCTTCAATGACCGATACTCGACTAGACTGCCCT CGCGGTGGAAAAGCAAGCAGTTCCACGTAGACCGGAGGTGAGACATGCTG CAGCTAACGACGGCATGCAGTCGTCAATCGAGCCGGCAGGGCTCCGATAC GATGTATAGTACCGGTATGCCATACACGTACTACTTGGTATGGGCACGCG CACGACATGTCTGGGCAGTTTTGCAGGGCGAGCTCGGTTGCTGTGGATGC TCACGAGCACGCACAGCAGATCAAAGTTTATCTGCCACGTGCAGTAGCCG CAAGACGTTGACTTTATGGCCTCAATCTTCTCGCCTGTGACAGGCCGCAG AACGCCCAGGACGGCTACTTCACCAAGCTCAACTACAGCTCCGAGAAATT TCACGAGACGGAGAAGTACGGCAAAACCCAGCCCCTGAGCAAGCGCAAGC TGGGGTTTGGGACCAAGGATGCCTTCAAGCGCGGGGAGTTTACAGCAACT ATTCGGACGGAGCAATACAGGTCATTGCAGCTCTTTGTCAAGCATAAACT TCGCACGAAGCAACACAGCAAACAGAGTGAGCTCTCTGCAGGACCCACAA CCTTCCGTTTCACACCAACTTGTGAGCACTGCACATGTGCACGAGCAGCG GCCCAGCCGGAAAGCTGCTGAACACGACCCCACGGCGGCGTTTGGCCACC GATCTGTCTGGGTGGGTGTTGCAGTCTACACTTCGAATTATGTCAAAGCC TCAAAGAAAAGCATACACTTTCAAAGCCCACCGGGCCCATTCACAATATC AACTCATGCTCGCTCTTCCAAGTCACCTCCGTGGCCCATTCCTGATGAGG TTTGCCGCGGCTAGGTCTCATCCCCGTCCCCGGCGACAACTTTCGTGTGC CACCCGCCATGCCCCAGGGAGACAGTGAAGCACGAGCACAAGCTTATGGC AAACAACAGGAGGGTCGAGGTGCGTGGGATTGCATTTTCTCATGGCGGAC GGCAGCTCCCAAGGCCGTGCGCATCGTGACTCAGTGATGCATTCCAGCCG CAACTATTGGCGGTGCAGTGCACAGGCGTGCCTGTGCACAGTAGTCAACC GCTGGATTAACCGACGAGCACTCTGTCGGATCCGCATTAATTCATCCGCC TGTTGCTTGTGCGTGGGCTTGTGGATTACCATACTCCCCAATAAACGTGC GGGCAACAGGCCTCAGACACACCTTTTGGACAGCGGTCGGGCACGTGTGC AGGCCCGTGTAGACGTGGTGACGTGCCTGAACCGCAAAAAGTCATGTATG AGAACCTCATCATGCTTCGTAGGTTCTGCCGGGCCAAGGGGGGCCATCGC TGCTGGCCCTTGCCACCTTGCAATATGACATGTGTATGCAACTCTTGTTG AGGAAAAACTTTGCACATAACTTACGCTTTCTAGTCATCAACGTCCCACC ACGTGTGTGGCCGAGGATATAATTTTCGTATATTACGGGCCCCAGCCCTG CATGTCACATGAAACGGGCTGCAGGACAGCGTGGCTCGCGATACAATCAT ATCGATCAAGATGGCCCTGCATGTCCTATGGGGAGCGGCCCGCCCACAAG GCCTCAAGCTTTTGCTTGGACCTCACGGTCCGCTTACCCGACAGCAGTGG CAGGTGTCGCTCCCACACGACATGCATCGCCACACAAATCTCCTCGGCGA GGAGCCAGCCGACCACGTACCCCCCCCTGCTCTCTCAACGACCAACCGTG CGCTGTTGCTGCTGCCGCTGCTGCCGCCGCCGCTGTCGCTGCTGCTGCTG CTGCTGCTGCTGGCAGGAGGAGGAGGCCATTGTCCAGCGCGCTTTGGAAA AGCGCAACAACACCCGGAGATTCGTGGGCGGGAAGACCGAGGTCAAGTAC CTGTACGACATTGGGAGGACCCTCGTCAACGAGTTTGACCCCAAGAGCTC GCGGGACACCTTCTACAAGTTTAGTACGGTGAGAGCCGCATGCGCCAGGA AAGAGCCCCCCTACATATGTCCGTTGTTTTTCGCTGCGGCGGGGGGGGCG GGGGGGGGCGGGGCGGGGCGTCGCGGGTGTAGCCGTGCCGCATTTGTTGG TACAGCACAGCACAGCTACTGTACGAGTACACGTATAGTTCGAAGTACAG TGCCCACACACCCATGCTTCCAAGGTACTTCTTCGAGTATACACGTGATT TGAAGCACTTTATGGCTTCAACAGAGCGTTGCCCCAATCTGGAGCGCCTC AGCACAGCTATTGTGCTACTGTAGTACCTAATGCGTAGGCGGGCTCTCGT CCAAAATGTGTGTACTCGGCAGCACTGTCATGTACCCTCGTTTGACTGGC TTGCCTTGGTCGTCAGTGCAGCTCTTCCGCGAAAGGAGCACACAGAACAG CACAGTACACAGACTTACAAGATGGTACTACAGTAGTGTCTCTGTTGTGA CCGCTGTCTTCAACTACCCCTGCACCATGTCGGGTGGCAACCAATAAAGT ACGTACTTCGTATCTAACTCCTCAGCTCCAAGTAGAAGACGGGAGGGTGG CATACCTTCCCGCGTAGCGCGGGGGGAGTTTCGGGTTCGCAAGCATCATG CCGAAAGCCCCGCCCCACTAAGTGGAGGTGCCGGACGCCCCCTGGCCCCC GCGGGCAGACATTCCCTCCTCGGACACCCAGCAAGCACACGAAATCGACC ACGGCAGTTCTTCTCCCTACAACACAGGTAGGGAGCGATCGCTCGAAGGA ATGTTCACCGAGAGTGGGGAAGAGTCAGGGCAGTGAACACGACGATGTGT TGAGAGTGTGCCATGAGCCATGTGCGCGTCCATGGGGAGGCCCGTCTCCT TGTCTGCCACGCGGGCCGTCCACCCGACACGCGTGACATCGACGTGCCCC CCCTCCTGCGGCACGACGGCGCCGGCAGGGTCTCGGGAAGCGAACGGGAG AATACCGAACAATGTCTGCGGACATCGGCGAGACTGCGTGGGAGCACAAG GTGAATCTGAGGGGGCTAAGCACTGGGCGGCTTGCCGCAACATTTGGGGG GTCCGTACGTGGTGTCGCCGCCTGCGCTAGAGTACCGCTCTGGTATTGTA GAGTAGGCGAAGTTTACTTGACAGGAGTCCCTTCACTCTATACCAAGTGT GCACTTAGAAGTACTCCGAGTACAGCAGACTGTCAGCGGCACATACTTCG AAGTACACGTCAAAGTAGGTCACGGGTACCCCACTTTGCTTGCCATACTG GTACCGCGTAGCACTCGCTTCCATGTACTTTTAATTACATACAGGCGATT GCTGTGCACTCGCACTGCGTACCGCAGTAGCTCAGGCGGCCCGGGGCCCT GCTGGGGCGCCAGTGGGCTGGTCTTTACACACGCTACAGTAGTAGGCTGG TATTGGATCGGTTTATGTTTCCAGGACCGGCGCGGGCGCTGGCAACAAAG TGTGTCGAAGCCCACACCACCCCTGCACGTCCTTTGGTGCGGGACTGTTG GTAGCTCCTGAGGATACACACTGTGACTTTATGTGTACTTCCAAGTATGA GAGTCCTGGGGGAGGCGATACCTGGCCACAGTCTGCCACCGCCGCTGCCA CCGCCGCCTGCCTTGTTCCTCACAACTTGAAACTACCTTGGCTTCGTCGT GCCCGCGGCGGCGACCGCCGCTGCTGTCCTCGGCAGTACGAGGCCCCGGA GTTCGGACCGACTTCTCACATCAAGCACTTCAGCGACCGGAGTCACCTGG AGGTCCACGGGTTCTGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig1:7275390..7279206-

>mRNA_S-ischiensis_contig1.1051.1 ID=mRNA_S-ischiensis_contig1.1051.1|Name=mRNA_S-ischiensis_contig1.1051.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1362bp|location=Sequence derived from alignment at S-ischiensis_contig1:7275390..7279206- (Schizocladia ischiensis KU_0333)
ATGTACTCCACCAAGAGGATCAACAAGAACAACGTTGATGGCAACGCGTT
CATTACAATCGGGGATCCCTTCAATGACCGATACTCGACTAGACTGCCCT
CGCGGTGGAAAAGCAAGCAGTTCCACGTAGACCGGAGATGTACTCCACCA
AGAGGATCAACAAGAACAACGTTGATGGCAACGCGTTCATTACAATCGGG
GATCCCTTCAATGACCGATACTCGACTAGACTGCCCTCGCGGTGGAAAAG
CAAGCAGTTCCACGTAGACCGGAGGCCGCAGAACGCCCAGGACGGCTACT
TCACCAAGCTCAACTACAGCTCCGAGAAATTTCACGAGACGGAGAAGTAC
GGCAAAACCCAGCCCCTGAGCAAGCGCAAGCTGGGGTTTGGGACCAAGGA
TGCCTTCAAGCGCGGGGAGTTTACAGCAACTATTCGGACGGAGCAATACA
GGCCGCAGAACGCCCAGGACGGCTACTTCACCAAGCTCAACTACAGCTCC
GAGAAATTTCACGAGACGGAGAAGTACGGCAAAACCCAGCCCCTGAGCAA
GCGCAAGCTGGGGTTTGGGACCAAGGATGCCTTCAAGCGCGGGGAGTTTA
CAGCAACTATTCGGACGGAGCAATACAGGGAGACAGTGAAGCACGAGCAC
AAGCTTATGGCAAACAACAGGAGGGTCGAGGGAGACAGTGAAGCACGAGC
ACAAGCTTATGGCAAACAACAGGAGGGTCGAGGAGGAGGAGGCCATTGTC
CAGCGCGCTTTGGAAAAGCGCAACAACACCCGGAGATTCGTGGGCGGGAA
GACCGAGGTCAAGTACCTGTACGACATTGGGAGGACCCTCGTCAACGAGT
TTGACCCCAAGAGCTCGCGGGACACCTTCTACAAGTTTAGTACGGAGGAG
GAGGCCATTGTCCAGCGCGCTTTGGAAAAGCGCAACAACACCCGGAGATT
CGTGGGCGGGAAGACCGAGGTCAAGTACCTGTACGACATTGGGAGGACCC
TCGTCAACGAGTTTGACCCCAAGAGCTCGCGGGACACCTTCTACAAGTTT
AGTACGGGTCTCGGGAAGCGAACGGGAGAATACCGAACAATGTCTGCGGA
CATCGGCGAGACTGCGTGGGAGCACAAGGGTCTCGGGAAGCGAACGGGAG
AATACCGAACAATGTCTGCGGACATCGGCGAGACTGCGTGGGAGCACAAG
TACGAGGCCCCGGAGTTCGGACCGACTTCTCACATCAAGCACTTCAGCGA
CCGGAGTCACCTGGAGGTCCACGGGTTCTGATACGAGGCCCCGGAGTTCG
GACCGACTTCTCACATCAAGCACTTCAGCGACCGGAGTCACCTGGAGGTC
CACGGGTTCTGA
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