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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1435 |
| Cds size | 951 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815358.9108858-UTR-S-ischiensis_contig1:7222026..7222152 | 1622815358.9108858-UTR-S-ischiensis_contig1:7222026..7222152 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7222027..7222152 + |
| 1695739658.943774-UTR-S-ischiensis_contig1:7222026..7222152 | 1695739658.943774-UTR-S-ischiensis_contig1:7222026..7222152 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7222027..7222152 + |
| 1622815358.9527144-UTR-S-ischiensis_contig1:7223382..7223740 | 1622815358.9527144-UTR-S-ischiensis_contig1:7223382..7223740 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7223383..7223740 + |
| 1695739658.9713464-UTR-S-ischiensis_contig1:7223382..7223740 | 1695739658.9713464-UTR-S-ischiensis_contig1:7223382..7223740 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7223383..7223740 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815358.9288628-CDS-S-ischiensis_contig1:7222152..7222561 | 1622815358.9288628-CDS-S-ischiensis_contig1:7222152..7222561 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7222153..7222561 + |
| 1695739658.9532628-CDS-S-ischiensis_contig1:7222152..7222561 | 1695739658.9532628-CDS-S-ischiensis_contig1:7222152..7222561 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7222153..7222561 + |
| 1622815358.9413414-CDS-S-ischiensis_contig1:7222840..7223382 | 1622815358.9413414-CDS-S-ischiensis_contig1:7222840..7223382 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7222841..7223382 + |
| 1695739658.9635246-CDS-S-ischiensis_contig1:7222840..7223382 | 1695739658.9635246-CDS-S-ischiensis_contig1:7222840..7223382 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7222841..7223382 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1042.1 >prot_S-ischiensis_contig1.1042.1 ID=prot_S-ischiensis_contig1.1042.1|Name=mRNA_S-ischiensis_contig1.1042.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=317bp
MATHKHDMIKDAPSIKSQDHNSAFTPTTASSARGSSKAQQMEFEAEDEGK
GAHVHGDGSPQALRTVPGLQELFSCLQRQADGMQRQLRDLLQKVDHMQGQ
LHEQGTRNNQLQLRLVQGQGRLEGELAKHTLQLQRLGPTDPQELGGLDEP
TTPQVESRNCEVVANPGTSGGHSAPVRSHGLPPAAGPRVAAAAAGLATGS
HQTGQFRTVTSSESGADATAAGASESTRTPRAASGAGTGTGRAASPEATL
EGFLKVGSSESGTRIATQAAIASESAIPAPPAPRTLGGGGGSGGGAAQPA
GPNASGRGQSPAGGGS* back to topmRNA from alignment at S-ischiensis_contig1:7222027..7223740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1042.1 ID=mRNA_S-ischiensis_contig1.1042.1|Name=mRNA_S-ischiensis_contig1.1042.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1714bp|location=Sequence derived from alignment at S-ischiensis_contig1:7222027..7223740+ (Schizocladia ischiensis KU_0333)
AAACAAACGACCCTGGCGAACGCTCGTTTGTTCTCGAGCACGTTCTAGAG
CCTGTTCCTGGGAGGGTGGGACGGTCTCCAGGGGACCTCGCCTTGAACGG
GCCGTTAGGACCAAATCCCATGTGCAATGGCAACACACAAGCACGATATG
ATCAAGGACGCACCTTCAATCAAGTCCCAGGACCACAACTCCGCCTTCAC
CCCGACAACGGCTAGCTCTGCGCGCGGCAGTTCCAAGGCCCAGCAGATGG
AGTTTGAAGCTGAGGATGAGGGGAAAGGGGCGCACGTTCACGGAGACGGC
TCCCCTCAGGCGCTGAGGACTGTGCCCGGGCTTCAAGAACTATTCTCGTG
TCTCCAGCGACAGGCGGACGGGATGCAACGCCAGCTGCGCGATCTCCTGC
AGAAGGTGGATCACATGCAGGGCCAGCTGCATGAGCAAGGCACGCGAAAC
AACCAGCTGCAACTGCGGTTAGTTCAAGGTCAGGGAAGGCTGGAGGGTGA
GCTCGCAAAGCACACTCTGCAGCTGCAACGGCTGGGTAAGTGACTGCTGG
CCCCGGGGTGGCAAAATGCCCATGCGCCAGACCATTGTAGCCCGAGTGCC
ACCGTCAAGCGACATGCTCTCCCTGTGCCCGACACTGGAATGGTGCGCAG
CCATGTATGCCGTGCCGGAACAGAACTGGAGGTTTTGAGGCAGCACTTGG
TGTGGTTAAGGGCTGGGCCCGGGGTGCTTCGTGCCGGACGCGCGACCCGG
ACTTACTCTCTGGCGCAAGCTCAAATCCCTCTTTCTACTTACGCTACCGT
GCCGTCTGCCGCAGGCCCCACTGATCCCCAGGAGCTGGGCGGGCTGGACG
AGCCGACCACCCCGCAAGTGGAGTCCCGCAACTGCGAGGTCGTCGCCAAC
CCTGGGACCAGCGGGGGGCACTCTGCACCGGTTAGGAGTCACGGGCTCCC
TCCAGCAGCAGGCCCCCGGGTGGCCGCCGCGGCGGCAGGCCTGGCCACTG
GCAGTCACCAAACGGGTCAGTTCCGAACCGTCACGAGCTCCGAGTCTGGG
GCGGATGCCACCGCGGCTGGTGCCTCTGAGTCTACTCGGACGCCCAGAGC
TGCCAGTGGCGCTGGCACTGGCACGGGCAGGGCGGCCTCCCCGGAAGCGA
CTTTGGAAGGCTTCTTGAAAGTTGGGAGCTCCGAGTCAGGGACGCGGATT
GCCACTCAGGCTGCCATTGCCTCCGAGTCCGCCATCCCGGCCCCACCCGC
CCCCCGCACACTCGGCGGCGGTGGCGGGAGCGGCGGCGGCGCCGCACAAC
CTGCCGGACCAAACGCGAGTGGCCGCGGGCAAAGCCCCGCAGGCGGCGGC
AGCTGAAAGGGCAAAGCCGTGCAGCGAAAGCAAGCGTGGGAGGGGAGCGG
AGCGGGAAGTGCGGGCGCCCTCGGCGCTGCAGGCACAGATCGTGACCGAG
CCGCGCAAACGCGGGCCAGGGGCCCCGGCGGCATTGACCGGGGCGCTGCC
CAACCTCAAGGGAGGCGGGGCCAAGCGCGAGCAGGGGCAAGGCGGAACGG
ACGGTGCACGGGCAGAGAGGGACCCGCCGCCGCGGGCGGGGGCTGGGGGC
CCCGATGATGTCGACGGTGGGGCCGCCCAACCTTGCAGGCCGGGCCAGTT
GGGAGAGTCCAAAGCCCCAGATGCAACGGCGCACGGGTCGGGGCCGTGGG
GTGAGAGCAGGCAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7222027..7223740+ >mRNA_S-ischiensis_contig1.1042.1 ID=mRNA_S-ischiensis_contig1.1042.1|Name=mRNA_S-ischiensis_contig1.1042.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1902bp|location=Sequence derived from alignment at S-ischiensis_contig1:7222027..7223740+ (Schizocladia ischiensis KU_0333)
ATGGCAACACACAAGCACGATATGATCAAGGACGCACCTTCAATCAAGTC
CCAGGACCACAACTCCGCCTTCACCCCGACAACGGCTAGCTCTGCGCGCG
GCAGTTCCAAGGCCCAGCAGATGGAGTTTGAAGCTGAGGATGAGGGGAAA
GGGGCGCACGTTCACGGAGACGGCTCCCCTCAGGCGCTGAGGACTGTGCC
CGGGCTTCAAGAACTATTCTCGTGTCTCCAGCGACAGGCGGACGGGATGC
AACGCCAGCTGCGCGATCTCCTGCAGAAGGTGGATCACATGCAGGGCCAG
CTGCATGAGCAAGGCACGCGAAACAACCAGCTGCAACTGCGGTTAGTTCA
AGGTCAGGGAAGGCTGGAGGGTGAGCTCGCAAAGCACACTCTGCAGCTGC
AACGGCTGGATGGCAACACACAAGCACGATATGATCAAGGACGCACCTTC
AATCAAGTCCCAGGACCACAACTCCGCCTTCACCCCGACAACGGCTAGCT
CTGCGCGCGGCAGTTCCAAGGCCCAGCAGATGGAGTTTGAAGCTGAGGAT
GAGGGGAAAGGGGCGCACGTTCACGGAGACGGCTCCCCTCAGGCGCTGAG
GACTGTGCCCGGGCTTCAAGAACTATTCTCGTGTCTCCAGCGACAGGCGG
ACGGGATGCAACGCCAGCTGCGCGATCTCCTGCAGAAGGTGGATCACATG
CAGGGCCAGCTGCATGAGCAAGGCACGCGAAACAACCAGCTGCAACTGCG
GTTAGTTCAAGGTCAGGGAAGGCTGGAGGGTGAGCTCGCAAAGCACACTC
TGCAGCTGCAACGGCTGGGCCCCACTGATCCCCAGGAGCTGGGCGGGCTG
GACGAGCCGACCACCCCGCAAGTGGAGTCCCGCAACTGCGAGGTCGTCGC
CAACCCTGGGACCAGCGGGGGGCACTCTGCACCGGTTAGGAGTCACGGGC
TCCCTCCAGCAGCAGGCCCCCGGGTGGCCGCCGCGGCGGCAGGCCTGGCC
ACTGGCAGTCACCAAACGGGTCAGTTCCGAACCGTCACGAGCTCCGAGTC
TGGGGCGGATGCCACCGCGGCTGGTGCCTCTGAGTCTACTCGGACGCCCA
GAGCTGCCAGTGGCGCTGGCACTGGCACGGGCAGGGCGGCCTCCCCGGAA
GCGACTTTGGAAGGCTTCTTGAAAGTTGGGAGCTCCGAGTCAGGGACGCG
GATTGCCACTCAGGCTGCCATTGCCTCCGAGTCCGCCATCCCGGCCCCAC
CCGCCCCCCGCACACTCGGCGGCGGTGGCGGGAGCGGCGGCGGCGCCGCA
CAACCTGCCGGACCAAACGCGAGTGGCCGCGGGCAAAGCCCCGCAGGCGG
CGGCAGCTGAGCCCCACTGATCCCCAGGAGCTGGGCGGGCTGGACGAGCC
GACCACCCCGCAAGTGGAGTCCCGCAACTGCGAGGTCGTCGCCAACCCTG
GGACCAGCGGGGGGCACTCTGCACCGGTTAGGAGTCACGGGCTCCCTCCA
GCAGCAGGCCCCCGGGTGGCCGCCGCGGCGGCAGGCCTGGCCACTGGCAG
TCACCAAACGGGTCAGTTCCGAACCGTCACGAGCTCCGAGTCTGGGGCGG
ATGCCACCGCGGCTGGTGCCTCTGAGTCTACTCGGACGCCCAGAGCTGCC
AGTGGCGCTGGCACTGGCACGGGCAGGGCGGCCTCCCCGGAAGCGACTTT
GGAAGGCTTCTTGAAAGTTGGGAGCTCCGAGTCAGGGACGCGGATTGCCA
CTCAGGCTGCCATTGCCTCCGAGTCCGCCATCCCGGCCCCACCCGCCCCC
CGCACACTCGGCGGCGGTGGCGGGAGCGGCGGCGGCGCCGCACAACCTGC
CGGACCAAACGCGAGTGGCCGCGGGCAAAGCCCCGCAGGCGGCGGCAGCT
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