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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1173 |
| Cds size | 897 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815375.5004833-CDS-S-ischiensis_contig1:7144428..7145325 | 1622815375.5004833-CDS-S-ischiensis_contig1:7144428..7145325 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7144429..7145325 + |
| 1695739665.4157574-CDS-S-ischiensis_contig1:7144428..7145325 | 1695739665.4157574-CDS-S-ischiensis_contig1:7144428..7145325 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7144429..7145325 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815375.5713432-UTR-S-ischiensis_contig1:7145325..7145601 | 1622815375.5713432-UTR-S-ischiensis_contig1:7145325..7145601 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7145326..7145601 + |
| 1695739665.4262156-UTR-S-ischiensis_contig1:7145325..7145601 | 1695739665.4262156-UTR-S-ischiensis_contig1:7145325..7145601 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7145326..7145601 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1035.1 >prot_S-ischiensis_contig1.1035.1 ID=prot_S-ischiensis_contig1.1035.1|Name=mRNA_S-ischiensis_contig1.1035.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=299bp
EPCKGHNVTLYLLVVIRRCESRLPYCTPISLTYHESPSASATVQHVRTDK
TGSSILSSSSSASSSSSSSSNIPRRAVLRAHAGHGKPASIILRVAARPGP
SARAGRSPASAPAAAARAARSVDRLIDRHRRAGGVQTPQAPSRRLGSSPA
PLNLSLRSELTAPRALLSQAPSGSSAGRKQLLWLWRALGSYCSVAALQWN
GLRSFTVPSRSNAVGLRVPARGPLHWHLSGHGPSCARTRQASRTGAVLQT
KMTRVYHSRGARSIRKGTARDGGPSRSVPRGHAAARLVTAVTTYLSIK* back to topmRNA from alignment at S-ischiensis_contig1:7144429..7145601+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1035.1 ID=mRNA_S-ischiensis_contig1.1035.1|Name=mRNA_S-ischiensis_contig1.1035.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1173bp|location=Sequence derived from alignment at S-ischiensis_contig1:7144429..7145601+ (Schizocladia ischiensis KU_0333)
GAACCTTGTAAAGGGCATAATGTTACGTTATACCTACTGGTCGTCATTCG
GAGGTGCGAATCACGGCTACCGTACTGTACGCCGATAAGCTTAACATATC
ACGAGAGCCCGAGTGCCAGTGCCACGGTGCAGCATGTACGTACAGACAAA
ACAGGAAGCTCCATCCTCTCCTCCTCCTCCTCCGCCTCCTCCTCCTCATC
ATCATCGTCAAACATCCCTCGGCGCGCAGTACTTCGTGCGCATGCCGGCC
ATGGCAAGCCGGCGTCAATAATTCTTCGTGTCGCCGCGCGGCCGGGGCCA
TCAGCCCGGGCCGGCCGGTCGCCCGCGAGTGCGCCAGCAGCAGCAGCCCG
AGCGGCTCGATCGGTCGACCGCTTGATCGACCGTCATCGACGCGCTGGAG
GGGTCCAGACCCCTCAGGCTCCATCAAGGAGGCTCGGCTCTTCTCCGGCC
CCCCTGAACCTCAGCCTGAGGTCCGAGTTGACCGCGCCGCGCGCGCTTCT
ATCACAAGCGCCCTCAGGCTCCTCTGCGGGCCGCAAACAGCTACTGTGGC
TATGGCGTGCACTTGGGAGCTACTGCAGCGTCGCGGCTCTCCAGTGGAAT
GGACTTCGGAGTTTTACTGTACCGTCACGCTCAAATGCAGTGGGCCTCCG
AGTCCCAGCCCGAGGGCCACTGCACTGGCATTTGAGCGGTCACGGCCCGA
GTTGCGCACGGACGCGGCAGGCTAGCAGGACCGGGGCCGTACTGCAGACA
AAAATGACGCGAGTTTATCACTCGCGCGGCGCTCGCTCGATTCGCAAGGG
CACGGCGCGTGACGGTGGCCCGAGTCGGTCGGTTCCGCGTGGGCACGCCG
CTGCGCGACTTGTGACTGCGGTGACTACGTACTTGAGCATCAAGTAGTAG
TAGGTAGCTCCTACGCGGCGGCGGGACCAGCACGTCGGCGAGGGCGGCTT
ACGGATCAACCCTTTGTCTACCCAAGAACGGCACAGTGACAGGGTCTCAC
CGCGCGTGCATACACCCCACGCATCCCCAGCGGTGAACGGCGTATTAAAC
TTAGTTAGGTCGGCCCGGCCCTCTAAGCCCGCTGCCGCCGCCGCTGCCGC
CGCCACCACCGCAATTCGAAATTGCGAGTCCCATCAATGCACGGCCGTGC
AACCCGCCCCTCCCCAGTGGCAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7144429..7145601+ >mRNA_S-ischiensis_contig1.1035.1 ID=mRNA_S-ischiensis_contig1.1035.1|Name=mRNA_S-ischiensis_contig1.1035.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1794bp|location=Sequence derived from alignment at S-ischiensis_contig1:7144429..7145601+ (Schizocladia ischiensis KU_0333)
GAACCTTGTAAAGGGCATAATGTTACGTTATACCTACTGGTCGTCATTCG
GAGGTGCGAATCACGGCTACCGTACTGTACGCCGATAAGCTTAACATATC
ACGAGAGCCCGAGTGCCAGTGCCACGGTGCAGCATGTACGTACAGACAAA
ACAGGAAGCTCCATCCTCTCCTCCTCCTCCTCCGCCTCCTCCTCCTCATC
ATCATCGTCAAACATCCCTCGGCGCGCAGTACTTCGTGCGCATGCCGGCC
ATGGCAAGCCGGCGTCAATAATTCTTCGTGTCGCCGCGCGGCCGGGGCCA
TCAGCCCGGGCCGGCCGGTCGCCCGCGAGTGCGCCAGCAGCAGCAGCCCG
AGCGGCTCGATCGGTCGACCGCTTGATCGACCGTCATCGACGCGCTGGAG
GGGTCCAGACCCCTCAGGCTCCATCAAGGAGGCTCGGCTCTTCTCCGGCC
CCCCTGAACCTCAGCCTGAGGTCCGAGTTGACCGCGCCGCGCGCGCTTCT
ATCACAAGCGCCCTCAGGCTCCTCTGCGGGCCGCAAACAGCTACTGTGGC
TATGGCGTGCACTTGGGAGCTACTGCAGCGTCGCGGCTCTCCAGTGGAAT
GGACTTCGGAGTTTTACTGTACCGTCACGCTCAAATGCAGTGGGCCTCCG
AGTCCCAGCCCGAGGGCCACTGCACTGGCATTTGAGCGGTCACGGCCCGA
GTTGCGCACGGACGCGGCAGGCTAGCAGGACCGGGGCCGTACTGCAGACA
AAAATGACGCGAGTTTATCACTCGCGCGGCGCTCGCTCGATTCGCAAGGG
CACGGCGCGTGACGGTGGCCCGAGTCGGTCGGTTCCGCGTGGGCACGCCG
CTGCGCGACTTGTGACTGCGGTGACTACGTACTTGAGCATCAAGTAGGAA
CCTTGTAAAGGGCATAATGTTACGTTATACCTACTGGTCGTCATTCGGAG
GTGCGAATCACGGCTACCGTACTGTACGCCGATAAGCTTAACATATCACG
AGAGCCCGAGTGCCAGTGCCACGGTGCAGCATGTACGTACAGACAAAACA
GGAAGCTCCATCCTCTCCTCCTCCTCCTCCGCCTCCTCCTCCTCATCATC
ATCGTCAAACATCCCTCGGCGCGCAGTACTTCGTGCGCATGCCGGCCATG
GCAAGCCGGCGTCAATAATTCTTCGTGTCGCCGCGCGGCCGGGGCCATCA
GCCCGGGCCGGCCGGTCGCCCGCGAGTGCGCCAGCAGCAGCAGCCCGAGC
GGCTCGATCGGTCGACCGCTTGATCGACCGTCATCGACGCGCTGGAGGGG
TCCAGACCCCTCAGGCTCCATCAAGGAGGCTCGGCTCTTCTCCGGCCCCC
CTGAACCTCAGCCTGAGGTCCGAGTTGACCGCGCCGCGCGCGCTTCTATC
ACAAGCGCCCTCAGGCTCCTCTGCGGGCCGCAAACAGCTACTGTGGCTAT
GGCGTGCACTTGGGAGCTACTGCAGCGTCGCGGCTCTCCAGTGGAATGGA
CTTCGGAGTTTTACTGTACCGTCACGCTCAAATGCAGTGGGCCTCCGAGT
CCCAGCCCGAGGGCCACTGCACTGGCATTTGAGCGGTCACGGCCCGAGTT
GCGCACGGACGCGGCAGGCTAGCAGGACCGGGGCCGTACTGCAGACAAAA
ATGACGCGAGTTTATCACTCGCGCGGCGCTCGCTCGATTCGCAAGGGCAC
GGCGCGTGACGGTGGCCCGAGTCGGTCGGTTCCGCGTGGGCACGCCGCTG
CGCGACTTGTGACTGCGGTGACTACGTACTTGAGCATCAAGTAG back to top
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