mRNA_S-ischiensis_contig1.1031.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: A0A139AF20_GONPJ (RhoGAP-domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AF20_GONPJ) HSP 1 Score: 68.6 bits (166), Expect = 1.890e-10 Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 3
Query: 66 LFLCLDFLDAEGLSEEGLYRISGRKDRVDALSDSIRDGT-LSETDMRETGDVHAVAGAIKATLRTHRPLLLPAAERGLFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQALACTIGVSM 482
L C+ +++ GL+EEGLYRIS + V L G + M E D H VAG +K LR ++P + + ++A + A ++SA + + VL L HLQKV S N+M A LA GV++
Sbjct: 112 LIRCIQYVEDNGLTEEGLYRISASQSSVHRLKAEFDGGDDVDIPKMSELADPHTVAGCLKLYLRELPEPIIPQSLAKTLNAISPESATLKAQLISALSKLPRINLSVLSHLAIHLQKVSIQSEKNKMPASNLAIVFGVTL 251
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: A0A8B7YYM5_ACAPL (uncharacterized protein LOC110983131 isoform X1 n=23 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YYM5_ACAPL) HSP 1 Score: 59.7 bits (143), Expect = 2.410e-7 Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSIR-DGTLSETDMRETGDVHAVAGAIKATLRTHRPLLLPAAERG----LFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQAL 458
C++F+D EGL++EG+YR+SG++ D L+ + D +S M + HAVA A+KA + L+P + +F+G + A+ P+ +L L+QH +V +HS N+M AQ L
Sbjct: 1190 CIEFIDKEGLTQEGIYRVSGKQADCDLLTTKFKEDPNISIYSMEVS--CHAVASAVKAFFKNLPDPLIPHGLQSELLQMFKGKSTEE--FLDAMPEFFNKLSPIRLAILRFLMQHFARVCSHSEVNKMAAQNL 1318
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: UPI001455B607 (rho GTPase-activating protein 5-like isoform X1 n=9 Tax=Asterias rubens TaxID=7604 RepID=UPI001455B607) HSP 1 Score: 59.7 bits (143), Expect = 2.450e-7 Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSIRDGTLSETDMRETGDVHAVAGAIKATLRTHRPLLLPAAERG----LFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQAL 458
C++F+D EG+S+EG+YR+SG+ DAL++ + + E VHAVA A+K + L+P +G +F+G + A+ P+ +L L+QH +V+ +S N+M+ Q L
Sbjct: 1621 CIEFIDREGISQEGIYRVSGKSADCDALTERFENDPNISIESMEIS-VHAVASAVKQFFKHLPDPLIPHELQGELLQMFKGKSQE--DFLEAMPEFFNKLPPIRLAILKFLMQHFGRVIVNSEVNKMSEQNL 1749
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: UPI001F4F2BF2 (N-chimaerin n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F2BF2) HSP 1 Score: 58.9 bits (141), Expect = 3.750e-7 Identity = 41/148 (27.70%), Postives = 73/148 (49.32%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSI-RDGTLSETDMRETGDVHAVAGAIKATLR----------THRPLLLPAAERGLFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQALACTIGVSML 485
C++ ++ GL EGLYR+SG + V+AL ++ DG L++ + +++ +AGA+K LR H PL+ ++ + L AA+ A P Q L L++HL +V H +N+MT+ L+ +++
Sbjct: 281 CVEEIERRGLDTEGLYRVSGFAEEVEALKLALDTDGELADLGPEKYDNINVIAGALKLYLRLLPIPLITFDAHPPLIEATKKKTVSEQL--------AAMKEAVMILPPAHYQTLKFLMEHLYRVSQHVDTNKMTSHNLSTVFAPTLM 420
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: Q9W4A9_DROME (Rho GTPase activating protein at 5A, isoform A n=13 Tax=melanogaster group TaxID=32346 RepID=Q9W4A9_DROME) HSP 1 Score: 58.5 bits (140), Expect = 5.200e-7 Identity = 44/142 (30.99%), Postives = 75/142 (52.82%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSI-RDGTLSETDMRET--GDVHAVAGAIKATLRTHR-PLL-LPAAERGLFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQALACTIGVSML 485
C++ ++A G+ +EG+YR+SG D ++AL ++ R+G +TDM ET G+V+ +AG +K LR PL+ A + G G+ A + A P L +L+HL++V +H N+M LA +++
Sbjct: 325 CVEEVEARGMLQEGIYRVSGFADEIEALKLALDREG--EKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRTGKQAEQRQLMAEAVRRLPPAHHSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLI 464
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: A0A0P4WM08_SCYOL (Uncharacterized protein n=4 Tax=Portunidae TaxID=6757 RepID=A0A0P4WM08_SCYOL) HSP 1 Score: 58.2 bits (139), Expect = 6.960e-7 Identity = 42/147 (28.57%), Postives = 75/147 (51.02%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSI-RDGTLSETDMRETGDVHAVAGAIKATLRTHRPLLLPAAERGLFRGLP---------GQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQALACTIGVSML 485
C+ ++A GL+ EG+YR+ G +D+V+AL + RDG + + GD++ VAG +K LR L +P F L + + + +++S TA L ++ HL +V HS +N+MTA +L+ + +++
Sbjct: 282 CISEIEARGLTSEGIYRVPGSQDQVEALKLAFERDGENVNLNEKAVGDINVVAGVLKLYLRL---LPIPLITAQCFTHLQIACKLSDPDARVSSIKDSLLSLPTAHY----STLKAIILHLGRVYKHSAANKMTATSLSTVLAPTLI 421
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: UPI0018D70835 (rho GTPase-activating protein 5-like isoform X1 n=23 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D70835) HSP 1 Score: 58.2 bits (139), Expect = 8.360e-7 Identity = 40/132 (30.30%), Postives = 67/132 (50.76%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSIRDGTLSETDMRETGDVHAVAGAIKATLRTHRPLLLPAAERG----LFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQAL 458
C++F+D EG+ +EG+YR+SG++ DAL+ ++ + + HAVA A+KA + L+P ++ +F+G A A+ P+ L L+QH +V A+S N+M AQ L
Sbjct: 1680 CIEFIDREGVGQEGIYRVSGKQADCDALTVMFKEDPNISIEALDIS-CHAVASAVKAFFKNLPDPLIPREQQAELLQMFKGK--STADFLDAMPEFFNKLSPIRLATLRYLMQHFGRVSANSEVNKMAAQNL 1808
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: A0A0M4ELS2_DROBS (RhoGAP5A (Fragment) n=2 Tax=Drosophila busckii TaxID=30019 RepID=A0A0M4ELS2_DROBS) HSP 1 Score: 57.8 bits (138), Expect = 9.560e-7 Identity = 45/142 (31.69%), Postives = 73/142 (51.41%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSI-RDGTLSETDMRET--GDVHAVAGAIKATLRTHR-PLL-LPAAERGLFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQALACTIGVSML 485
C++ ++A G+ +EG+YR+SG D +DAL ++ RDG +TDM ET G+V+ +AG +K LR PL+ A + G + A + A P L +L HL++V +H N+M LA +++
Sbjct: 316 CVEEVEARGMLQEGIYRVSGFADEIDALKLALDRDG--EKTDMSETAYGNVNVIAGTLKLYLRLLPVPLITFQAYPSFMAAGRDAKQAEQLQLMAEAVRRLPPAHFNCLQYMLVHLKRVASHYAVNKMNEHNLATVFAPTLI 455
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: B4JP00_DROGR (GH24923 n=6 Tax=Drosophila TaxID=7215 RepID=B4JP00_DROGR) HSP 1 Score: 57.4 bits (137), Expect = 1.310e-6 Identity = 44/142 (30.99%), Postives = 73/142 (51.41%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSI-RDGTLSETDMRET--GDVHAVAGAIKATLRTHR-PLL-LPAAERGLFRGLPGQAAPVAAAVVSATTAFDPVAAQVLDGLLQHLQKVLAHSPSNRMTAQALACTIGVSML 485
C++ ++A G+ +EG+YR+SG D +DAL ++ RDG +TDM E G+V+ +AG +K LR PL+ A + G + A + A P L +L+HL++V +H N+M LA +++
Sbjct: 333 CVEEVEARGMLQEGIYRVSGFADEIDALKLALDRDG--DKTDMSEVAYGNVNVIAGTLKLYLRLLPVPLITFQAYPNFMAAGRNAKQAEQLQLMAEAVRRLPPAHYSCLQYMLEHLKRVASHYAVNKMNEHNLATVFAPTLI 472
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Match: A0A0D2U6L0_CAPO3 (Rho-GAP domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U6L0_CAPO3) HSP 1 Score: 57.4 bits (137), Expect = 1.460e-6 Identity = 43/139 (30.94%), Postives = 65/139 (46.76%), Query Frame = 3
Query: 75 CLDFLDAEGLSEEGLYRISGRKDRVDALSDSIRDGTLSETDMRETGDVHAVAGAIKATLRTHRPLLLPAAERGLFRGLPGQAAPVAAAVVSATTAFDPVAA---QVLDGLLQHLQKVLAHSPSNRMTAQALACTIGVSM 482
CL +L+ +GL EEGL+R+ G ++ AL T D+R D VAG +K LR R +P F + P V A D + ++L L+ KV+A+ N+M+ ALA +IG+S+
Sbjct: 793 CLAYLEEQGLQEEGLFRVPGDVTKIKALKQQF--DTSINVDLRSVLDPSTVAGLLKLWLRETREPPIPKNMTREFNAIVSSTEPEHIRVHKLRAALDALPTLNREMLASLVHLFVKVIAYGHVNKMSLDALARSIGLSL 929 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1031.1 >prot_S-ischiensis_contig1.1031.1 ID=prot_S-ischiensis_contig1.1031.1|Name=mRNA_S-ischiensis_contig1.1031.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=159bp MAEDTLPGYSRGLRNALFLCLDFLDAEGLSEEGLYRISGRKDRVDALSDSback to top mRNA from alignment at S-ischiensis_contig1:7113092..7115006- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1031.1 ID=mRNA_S-ischiensis_contig1.1031.1|Name=mRNA_S-ischiensis_contig1.1031.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1915bp|location=Sequence derived from alignment at S-ischiensis_contig1:7113092..7115006- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7113092..7115006- >mRNA_S-ischiensis_contig1.1031.1 ID=mRNA_S-ischiensis_contig1.1031.1|Name=mRNA_S-ischiensis_contig1.1031.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=954bp|location=Sequence derived from alignment at S-ischiensis_contig1:7113092..7115006- (Schizocladia ischiensis KU_0333)back to top |