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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-01_007070.1 |
| Exons | 5 |
| Model size | 777 |
| Cds size | 774 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815358.75754-CDS-S-ischiensis_contig1:7105728..7106028 | 1622815358.75754-CDS-S-ischiensis_contig1:7105728..7106028 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7105729..7106028 - |
| 1695739658.8522568-CDS-S-ischiensis_contig1:7105728..7106028 | 1695739658.8522568-CDS-S-ischiensis_contig1:7105728..7106028 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7105729..7106028 - |
| 1622815358.7712176-CDS-S-ischiensis_contig1:7107472..7107556 | 1622815358.7712176-CDS-S-ischiensis_contig1:7107472..7107556 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7107473..7107556 - |
| 1695739658.8646305-CDS-S-ischiensis_contig1:7107472..7107556 | 1695739658.8646305-CDS-S-ischiensis_contig1:7107472..7107556 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7107473..7107556 - |
| 1622815358.7803645-CDS-S-ischiensis_contig1:7107792..7107894 | 1622815358.7803645-CDS-S-ischiensis_contig1:7107792..7107894 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7107793..7107894 - |
| 1695739658.874775-CDS-S-ischiensis_contig1:7107792..7107894 | 1695739658.874775-CDS-S-ischiensis_contig1:7107792..7107894 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7107793..7107894 - |
| 1622815358.794275-CDS-S-ischiensis_contig1:7109640..7109763 | 1622815358.794275-CDS-S-ischiensis_contig1:7109640..7109763 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7109641..7109763 - |
| 1695739658.8869686-CDS-S-ischiensis_contig1:7109640..7109763 | 1695739658.8869686-CDS-S-ischiensis_contig1:7109640..7109763 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7109641..7109763 - |
| 1622815358.8048186-CDS-S-ischiensis_contig1:7110287..7110452 | 1622815358.8048186-CDS-S-ischiensis_contig1:7110287..7110452 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7110288..7110452 - |
| 1695739658.8991325-CDS-S-ischiensis_contig1:7110287..7110452 | 1695739658.8991325-CDS-S-ischiensis_contig1:7110287..7110452 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7110288..7110452 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1029.1 >prot_S-ischiensis_contig1.1029.1 ID=prot_S-ischiensis_contig1.1029.1|Name=mRNA_S-ischiensis_contig1.1029.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=258bp
GAGSRAGGKVGPGDRYTRAREQAKRLTLEVARLRKEAGATKAALEGETTA
RRQLEERWHQATMEWGGEAAKLQEARLEAEAKAKKLGEELLQAQSQARSS
EAELASAARARESLGAVAAAARSRAEREVQAVVVAQGRLVRALQAEADMS
NRARAALEGELRELKEQHRQYVQEFLLWRDRAKRYRARLEDLGHQGDADP
PISPAPALGLAPSPACESPTATTGGATAESFARATAAGGLHDLPAAQAVG
RLEGLLTG back to topmRNA from alignment at S-ischiensis_contig1:7105728..7110452- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1029.1 ID=mRNA_S-ischiensis_contig1.1029.1|Name=mRNA_S-ischiensis_contig1.1029.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4725bp|location=Sequence derived from alignment at S-ischiensis_contig1:7105728..7110452- (Schizocladia ischiensis KU_0333)
GGGGCCGGGTCTCGGGCCGGGGGGAAGGTGGGCCCGGGCGACAGATACAC
ACGTGCACGTGAGCAGGCGAAGCGGCTGACACTTGAGGTGGCGAGGTTGA
GGAAGGAGGCTGGAGCGACAAAGGCGGCGCTGGAGGGGGAGACGACTGCT
CGCCGTCAACTGGAGGTGTGGCGGGAGGGAGGGAGGGACGGGGGGCGGGA
AGGAGAGAGGGCCTCGGGCAGGGAGGGGGGGGTGAGAGGGACTGGGGCAA
GGGAGGGAGGGAGGGAAATGTGGGGTGCGGAGGGGACATACAAAAATAGG
CCACATGGCCGATGGTCTGTGGTGTCCAATGCCAAGCGCATACCAAGTGC
TCTAGAACACGAGCAGGTGCTTCAGCACCGCAAATGACTTGCAGTCACCT
AAATAGTCCGAGGTGTAGCACTCGCAAGAACTCCGTTTTTCAGTGTGCAC
GAGTACAATGCTTCCGGGTATTGTACCTCGAAGCAGGTAATACCAAAAGG
GCCGGGGTTAGCTGCAGAGTACTTTACTTTGCTTCTGTAAGAATCTGCGG
CCCTCGGTTGAGAATGGGTGCTCCCTGCCCGCTGCCCCCCCTGCTGCAGC
TCCCCCGCCCTTCTCACCAGCAACCAACCACCCTACCCGTCTCCTGCGTT
TTCCGGTGCGGTTTCCTCATGCAATTTGTCGGTACGCAGGAGCGCTGGCA
CCAGGCCACTATGGAGTGGGGGGGGGAAGCGGCAAAGCTCCAAGAAGCCC
GCCTTGAGGCGGAGGCAAAGGCCAAGAAGCTGGGCGAGGAGTTGTTGCAG
GCACAGAGCCAGGCAAGCCGCCTCGCACGTTGTTCTGGGTTCCTCCGCGG
CACGCACGCATCGTGTCGCGTCGGGATAAAATAGTTAACTAAGTCTTGTA
CGATAGGGGTAAAATAGTCTGCAATAGGGATTAAATAGTCTACGACAAGG
ATAAAATAGTCTACAGCTCCAGGGATAAAATAGTGTGCAATAGCTCTAGA
GCTCTAAGGATAAAATAGTCTGCAACAAGTAGCGCGAGTGCCCCGAGTAA
ACGCCGAGTATGCTACTGTTGCTCTGAGCTTACTTTTCAAGTACACGGCT
TTGGCACGCGGTGCTTGGAAAGTGTGTACTCGTAATCGTATACATATTCG
TACTAGCTAGACAAAGTGCAAGTAATCGATTGCACCACCTACACGTACTG
CTACAATTGTATGTATTACCTACATTCTGCAAGCAATCGCACGTACTACT
TACGCATATTGCAAGCCATCGCAAGTACTACTATCACATAGTGCAATCCA
TCGTACGGAAGTATGTACTACTTTCACATACTGCAAGCAATCGCACGTAC
TACTTACACGTACTGCAGTCAATCGTCTGTACTACTGTACTTGCACGTTG
TTCCTGTTCATGCTTGCACATATTGCAAGCAATCGCACGTACTTATAAGT
ATTATAAGGAACAACACGGGGCGAGGTCCAGATATGTATATATATGTATA
CTGTATATATAAGGAACAACACGGGGCGAGGTGCGGGCCACGTCACTAGA
GACCTCAGCAGTGGCCCTTCCTTAGCTCGCCAGGGGAAATGTGTGCGGGG
CAAAAGAGGGGGAGGGGGGGGGAGGCACTACTTACACATATTGCAAGCAA
TTGCACGTACTATCTACACATACTGCAATCAATCATATGTACTCATACTC
GTACTACTTACTTGCACGTACTGCAACCATCGTACGTACTACTTACACAT
TCTGCAAGCAGTCAGGGACGCAAAGAGCAAGTGGGGGAGAGACGGAGAGA
GGGGGAGAACAGGTAGCAACCTAGTATACAGTAAGCTCCGTCTCCTGCTG
GGCTACCCCGGCCCCCTCCCCGGGGCAGTGTTTCAATATCGACTCGATCT
GACGTTGCTTTCGAAGACTACATTGATGCTTTGTTTTGCAGTACTTCTAT
GTATCCATGTATCGACATGCGGATGCGTAGCCTTCACTAGAACCAAGCGC
GGCAGTTTACCTAGGTTTTCCGATGGTGGAAGGCGTGCGGTCTGTGGTGC
TGGGGGGCCCCGGGCTGGGGTCGATACGTTCTCGATAGATAGTGTCATGG
ATATATACAGTATATATATACTTCGAAGTATATACTTCGAAGTATATGTT
TTCTCGTGTATGTGCTTGTACTCTCTCTATATATTCTACGTAGTATGTAC
CATGTACTCACGTCGGACAGGGTTGCTATTGCCCCATGTCCTGGGCATGC
CACCAGCGGTCGGCCCAGCACACTCTCCTTCCGATGCATACATACATGCA
TTCGCTGAATTGTTCGGCACTTGCATTGAAGCCCTGTCCCCGCGGGCGCG
CGTGGAGGTTCGATACTCGGCGGGCGGGAGGGGGTGGGGGGAGCAGGTGC
CGTCGCAGCGCGATGTGATCTGATGTGATAGGATGTGCGGCTCTACGCTC
CAAGTTGCTCTAGTGCACTGTGCAGGTACTCTACTATAGGGAGGAGTTTG
ATTGCACATCGCGTCACGTCACGATACGTCCCGTCGCGGGCCACCCCGCC
CGTCGTAGGCGAGGTCATCCGAGGCCGAGCTGGCGTCGGCGGCGCGGGCC
AGGGAGAGCCTGGGGGCCGTGGCGGCGGCTGCTCGCAGCCGGGCGGAGAG
GGAGGTGCAGGTACGGACGCCCCCTCGGTGTCTACTGCTGTACAATACTG
CTCTAGGTGTGCAGCAGAGCAAATAGGTACCCCTCTCTGCTTGCACTGCT
TCAGAGCACGGGGTTTGTACCTACTTCCCAGTGCTACAATCTTTTGCTAC
TGATAGCTGTGCTCTCTGGTTGCACTGCTCGAGTATCCCCGCTACAGACG
GGCCGCACTCGCGCCGCTGTACCCCTCCCCACGCGCGTGCCCGCAGGCGG
TGGTGGTGGCGCAGGGGCGGCTGGTCAGGGCACTGCAGGCCGAGGCGGAC
ATGTCCAACCGAGCACGGGCCGCTCTCGAGGTGTGGCGACGGCTCTTCCC
GACAGCGAACAGTGAAGAGCTCAAAAGTGCAGTAGCGAAATGCCTGCCGG
CCCTCTGCATGTACGCTACGAGTACTCCGAGTACAGGACAGCAAAGTACA
GTGCTGTACTGTCCTGTACTGCACAGCGGCATGCTTTACTGTACCGCAGA
TGCCCCTCTGGTGAGCGACGTGATGTTCAACTACATAGTGTGCAGTACTG
ACTGCACATAGAGCAGTATTGTAACAGTGGCACGGTACCGGAGCCCTTCC
GGCAGTGGGTGAATGCGAAGTATAGTCCAAGTACTTCGTAGCACTAATAT
ATCGTAGATAATACTTCAAAGTACTAAATACTTCGAAAGTGCAACAATAC
TGATAACAGCAACAATAAGCACTTAGTTAGTGCGAGGCTCTACCCCTCAG
GGTCAGCGGTCTCGGGAATAGGGCGGCACAGCGTGAGTACGTACTCGAGT
TATGTATCTCGAGTACGTGTACTTGTGGAAGTATGAGTACTAGTACTTCG
CAGTAGTAGGTTTTGCTGTCTTCTCATACACTTTGTATCGAACTATGTCA
TTGTATGTGAAGTGCGCACAGAATATACTAGTATATATACTCGTACATCC
ATAATACTCACTCTGCGCACGCCGCAGTCCCGAGACCATTGACCCCGTGC
CTCGATCGAGACGGAGCAGGCCCCCTCCCTCCCCTGGCAGACCCAGGGTG
GGAGGGAGGGGGGGGGCACACCTCCGCCAGGGGAACATGTGGGGAATTTC
GACCAATTTCCGCTTTTCAACGAGGGTGCTGGAAGAGCGGGAAATGGAAT
CTGCCGGCGTCTGGTTATCCGTTTGCAGACCTCACCGTGCTTGACTTTGA
TGTACGAGGTCCCTGGAACCGCCTCAGTTGGCTTTTAACAGGGCGAATAC
CTACTGAGTCACCCGCACAATACTAGAAAATGCGCTAGGAAGTACTGTAC
TGCACGTGTACTGTAAATAAATACTGAGTCACACGTACAGTGCTACAGTA
GACAATGCCCGTGTCCGGTGGCAACTACGACAGCAATAAAGCACAGGAAG
CGTACACATGCAGCACTGCTACTCACTGTGCACGGGACACGGCGTTCTCG
TGTACCGGAGGTGTGAAAGTTGACGGTGCTGAACCTTTAGCATGTGACCG
GTGCGCGGTCTCAAGACCAAGGCGAGCAAGCGCGATCGCGAGGGCGTGTG
CTTCATTCACTCCTTGCCGAGTACTTTCAAGTACTTCCAAGTGCTCACAG
TGTGATACAGCACACACATAGTACTTCGAAGTACTCTACTTCCAAGCATA
TGCCTCGTATAACGCGCTGCCAGTGCACTCTACTGCAATGGCCGTGCAAC
TAAGTGCGACACTTAGCCTCACGACTCCCCCTTCCCCGGCGCGCTCACAC
ACACACACACACACACACACACAGGGGGAGCTGCGGGAGCTGAAAGAGCA
GCACCGCCAGTACGTGCAAGAGTTTCTCCTCTGGCGGGACCGGGCCAAGC
GCTACCGGGCCCGCCTCGAGGACCTGGGACACCAAGGTGATGCCGACCCC
CCCATCTCGCCTGCCCCGGCCCTGGGCCTGGCTCCGAGCCCGGCCTGCGA
GTCTCCTACTGCTACTACAGGCGGCGCGACGGCCGAGTCCTTTGCGAGGG
CCACGGCGGCAGGAGGGCTGCATGACCTGCCGGCAGCGCAGGCCGTTGGC
CGGCTGGAAGGTCTGCTAACAGGGC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7105728..7110452- >mRNA_S-ischiensis_contig1.1029.1 ID=mRNA_S-ischiensis_contig1.1029.1|Name=mRNA_S-ischiensis_contig1.1029.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1548bp|location=Sequence derived from alignment at S-ischiensis_contig1:7105728..7110452- (Schizocladia ischiensis KU_0333)
GGGGCCGGGTCTCGGGCCGGGGGGAAGGTGGGCCCGGGCGACAGATACAC
ACGTGCACGTGAGCAGGCGAAGCGGCTGACACTTGAGGTGGCGAGGTTGA
GGAAGGAGGCTGGAGCGACAAAGGCGGCGCTGGAGGGGGAGACGACTGCT
CGCCGTCAACTGGAGGGGGCCGGGTCTCGGGCCGGGGGGAAGGTGGGCCC
GGGCGACAGATACACACGTGCACGTGAGCAGGCGAAGCGGCTGACACTTG
AGGTGGCGAGGTTGAGGAAGGAGGCTGGAGCGACAAAGGCGGCGCTGGAG
GGGGAGACGACTGCTCGCCGTCAACTGGAGGAGCGCTGGCACCAGGCCAC
TATGGAGTGGGGGGGGGAAGCGGCAAAGCTCCAAGAAGCCCGCCTTGAGG
CGGAGGCAAAGGCCAAGAAGCTGGGCGAGGAGTTGTTGCAGGCACAGAGC
CAGGAGCGCTGGCACCAGGCCACTATGGAGTGGGGGGGGGAAGCGGCAAA
GCTCCAAGAAGCCCGCCTTGAGGCGGAGGCAAAGGCCAAGAAGCTGGGCG
AGGAGTTGTTGCAGGCACAGAGCCAGGCGAGGTCATCCGAGGCCGAGCTG
GCGTCGGCGGCGCGGGCCAGGGAGAGCCTGGGGGCCGTGGCGGCGGCTGC
TCGCAGCCGGGCGGAGAGGGAGGTGCAGGCGAGGTCATCCGAGGCCGAGC
TGGCGTCGGCGGCGCGGGCCAGGGAGAGCCTGGGGGCCGTGGCGGCGGCT
GCTCGCAGCCGGGCGGAGAGGGAGGTGCAGGCGGTGGTGGTGGCGCAGGG
GCGGCTGGTCAGGGCACTGCAGGCCGAGGCGGACATGTCCAACCGAGCAC
GGGCCGCTCTCGAGGCGGTGGTGGTGGCGCAGGGGCGGCTGGTCAGGGCA
CTGCAGGCCGAGGCGGACATGTCCAACCGAGCACGGGCCGCTCTCGAGGG
GGAGCTGCGGGAGCTGAAAGAGCAGCACCGCCAGTACGTGCAAGAGTTTC
TCCTCTGGCGGGACCGGGCCAAGCGCTACCGGGCCCGCCTCGAGGACCTG
GGACACCAAGGTGATGCCGACCCCCCCATCTCGCCTGCCCCGGCCCTGGG
CCTGGCTCCGAGCCCGGCCTGCGAGTCTCCTACTGCTACTACAGGCGGCG
CGACGGCCGAGTCCTTTGCGAGGGCCACGGCGGCAGGAGGGCTGCATGAC
CTGCCGGCAGCGCAGGCCGTTGGCCGGCTGGAAGGTCTGCTAACAGGGGG
GGAGCTGCGGGAGCTGAAAGAGCAGCACCGCCAGTACGTGCAAGAGTTTC
TCCTCTGGCGGGACCGGGCCAAGCGCTACCGGGCCCGCCTCGAGGACCTG
GGACACCAAGGTGATGCCGACCCCCCCATCTCGCCTGCCCCGGCCCTGGG
CCTGGCTCCGAGCCCGGCCTGCGAGTCTCCTACTGCTACTACAGGCGGCG
CGACGGCCGAGTCCTTTGCGAGGGCCACGGCGGCAGGAGGGCTGCATGAC
CTGCCGGCAGCGCAGGCCGTTGGCCGGCTGGAAGGTCTGCTAACAGGG back to top
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