mRNA_S-ischiensis_contig1.1023.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A835YV33_9STRA (Surfeit locus protein 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV33_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.530e-38 Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 70 DVASLVRQYEFLSFNEHKKVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKERE-----EMAKEKAAVTAAEG 429
+V +++ Q++FLS NEH K HC+VT D+PARVDA+K HL SKKF K+++WYS DFSKYEPHI A+K DPK L+C LT LNRIP E+E H G+RF + E E + A +KAA A+G
Sbjct: 36 EVQAIIDQHDFLSLNEHGKAHCNVTNLDIPARVDALKTHLASKKFIKQRDWYSYDFSKYEPHIVANKKDPKLLFCKLTMKPLNRIPEEIETHVNGKRFKRLVAEAEAAQARKQANKKAAAVEADG 160
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A6H5JNC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC3_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.620e-32 Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 73 VASLVRQYEFLSFNEHKKVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKEREEMAKEKAAVTAAEGTRVEEQEE----FWMPS 468
V L++Q++FLS K+HC++T DLP AV HL SKK KK++EWY+ADFSKYEP + AHK++PK L+C LT+ LNRIP EVEAH G+R+ R E E + K+ E T E++EE FW+P+
Sbjct: 25 VMDLIKQFDFLSIGLRGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGL-KQAQRQPLGEDTEEEDEEEHGAEFWVPT 159
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: D7G730_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G730_ECTSI) HSP 1 Score: 124 bits (311), Expect = 7.600e-31 Identity = 70/160 (43.75%), Postives = 96/160 (60.00%), Query Frame = 1
Query: 22 MATRRKANPPSDGQKED-------VASLVRQYEFLSFNEHKKVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKEREEMAKEKAAVTAAEGTRVEEQEE----FWMPS 468
MA + K + P + D V L++Q++FLS K+HC++T DLP AV HL SKK KK++EWY+ADFSKYEP + AHK++PK L+C LT+ LNRIP EVEAH G+R+ R E E + K+ E + E+QEE W+P+
Sbjct: 1 MAKQGKGSAPKEMPGADDSSKPVHVMDLIKQFDFLSIGLTGKIHCALTNRDLPLNSTAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYGNRKAEMEGL-KQAQRQPLGEDSEEEDQEEDGAEIWVPT 159
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A7R9UEL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEL5_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.020e-30 Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = 1
Query: 34 RKANPPSDGQKEDVASLVRQYEFLSFN-EHKKVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFL-------VRLKEREE--MAKEKAAVTAAEGTRVEEQEEFWMPSDLDDS 483
R A P S EDV LV + L + +KV CS+T H++P AV+ +L SK F+K+KEWYSADFSKYEP++ AHK D +KL+C++T+ +LNRIP EV+ H +G+RF R K+REE M + + A+G EF++P D D+S
Sbjct: 10 RAALPMSADISEDVRKLVAETACLDLDLGRRKVVCSLTRHEMPPSAPAVQAYLRSKAFRKQKEWYSADFSKYEPYVVAHKKDGRKLFCNVTRKSLNRIPKEVQRHWEGKRFQRLKVEYDARQKKREEQEMIRRQREEAKAKG-------EFYLPEDFDES 162
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A7S2V5T7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5T7_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.180e-29 Identity = 68/160 (42.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 43 NPPSDGQKEDVASLVRQYE---FLSFNEHK-KVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKEREEMAKEKAAVT--AAEG--------TRVEEQEEFWMPSDLDD 480
N DG+ +A L+ Q + L E K +VHCSVTGHD+P ++V+ HL+SKKFKK+KEWY D+S++EP+I HK D + L+C LT+ LN+IP +V+ H +G+RF+ E+E++ EK + AEG T++EE + FW+P D D+
Sbjct: 6 NMAKDGENMSLAQLIEQNKDILSLVVREGKSRVHCSVTGHDIPPSSNSVQAHLKSKKFKKQKEWYKQDYSEFEPYIVPHKFDSRLLFCTLTRRPLNKIPNQVKKHVEGKRFIRLRAEKEKILAEKGSKKNKLAEGLPEGEKSDTKMEE-DAFWVPPDSDE 164
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A067D023_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D023_SAPPC) HSP 1 Score: 110 bits (276), Expect = 7.840e-27 Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 67 EDVASLVRQYEFLSF------NEHK--KVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKE 381
+DV +LV E L N+ K +V CS TGH++P RVD + HL SK++KK EWYS DFS+YEP+I +H+ PK LYC++T LN+IP+E+E H KG++FL RLKE
Sbjct: 8 DDVKTLVETTETLELVTIDGANDAKLVRVKCSATGHEMPPRVDVITAHLNSKRYKKATEWYSFDFSQYEPYIVSHRRKPKCLYCNVTGLVLNKIPSEIEKHMKGKKFL-RLKE 119
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A6G0XBI7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBI7_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.750e-25 Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 124 KVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKE 381
++ CS TGH++P +VD + H+ SK++KK EWYS DFS+YEP+I AH+ PK LYC++T LNRIPAEVE H GR+F RLKE
Sbjct: 33 RIKCSATGHEMPPKVDVITAHINSKRYKKATEWYSHDFSQYEPYIVAHRRKPKCLYCNVTGTVLNRIPAEVEKHMNGRKFQ-RLKE 117
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A024UMH0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMH0_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.650e-24 Identity = 48/86 (55.81%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 124 KVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKE 381
++ C+ TGH++P R D V HL SK+FKK EWYS DF+++EP+I AH+ PK LYC++T LN+IPAEVE H KG++FL R+KE
Sbjct: 36 RIKCTATGHEMPPRADIVTAHLNSKRFKKATEWYSYDFAQFEPYIVAHRRKPKCLYCNVTGIVLNKIPAEVEKHMKGKKFL-RMKE 120
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A1V9ZT28_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZT28_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.820e-24 Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 124 KVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKE 381
+V CS TGH++P RVD + H+ SK+FKK EWYS DFS+YEP+I +H+ PK LYC++T LN+IPAEVE H G++F RLKE
Sbjct: 32 RVKCSATGHEMPPRVDVITAHINSKRFKKATEWYSYDFSQYEPYIVSHRRKPKCLYCNVTGIVLNKIPAEVEKHMAGKKFQ-RLKE 116
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Match: A0A485LCX2_9STRA (Aste57867_18779 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCX2_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.100e-22 Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 124 KVHCSVTGHDLPARVDAVKLHLESKKFKKKKEWYSADFSKYEPHITAHKSDPKKLYCHLTQDTLNRIPAEVEAHTKGRRFLVRLKE 381
+V C+ T H++P RVD + H+ SK+FKK EWYS DF++YEP++ +H+ PK L+C++T LN+IPAEVE H +GR+FL RLKE
Sbjct: 33 RVKCTATEHEMPPRVDVITSHINSKRFKKATEWYSYDFAQYEPYLVSHRRKPKCLFCNVTGLVLNKIPAEVEKHMQGRKFL-RLKE 117 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1023.1 >prot_S-ischiensis_contig1.1023.1 ID=prot_S-ischiensis_contig1.1023.1|Name=mRNA_S-ischiensis_contig1.1023.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=177bp MPTSMATRRKANPPSDGQKEDVASLVRQYEFLSFNEHKKVHCSVTGHDLPback to top mRNA from alignment at S-ischiensis_contig1:7054008..7055696- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1023.1 ID=mRNA_S-ischiensis_contig1.1023.1|Name=mRNA_S-ischiensis_contig1.1023.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1689bp|location=Sequence derived from alignment at S-ischiensis_contig1:7054008..7055696- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7054008..7055696- >mRNA_S-ischiensis_contig1.1023.1 ID=mRNA_S-ischiensis_contig1.1023.1|Name=mRNA_S-ischiensis_contig1.1023.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1062bp|location=Sequence derived from alignment at S-ischiensis_contig1:7054008..7055696- (Schizocladia ischiensis KU_0333)back to top |