prot_S-dermatodea_contig1066.465.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1066.465.1
Unique Nameprot_S-dermatodea_contig1066.465.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length842
Homology
BLAST of mRNA_S-dermatodea_contig1066.465.1 vs. uniprot
Match: A0A6H5K008_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K008_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.160e-36
Identity = 126/334 (37.72%), Postives = 171/334 (51.20%), Query Frame = 0
Query:    1 MLSITCLHLASKYHSVYEEKVANFGTILNPQTVFNLGLDISLSMGTVLNASFRANPVTLQSLFCAIGKESPVVCACSEWVALCLVLLPHPRVGDGDLRSASQGPEAS---NPATSIGTIGTPSSKAAPRELASTIFPGMSFASLAS---------------------------SSPCDQIKQQDDRRWSSPDV-----------VWCRLS----LALGAIVLARRLARSEGPCLPVHVQHALGLGNARALGLVANGILAARRAFE-----EGEEEDMDGTVANVEREGNGGDGSGAFAGG-MAFGRLLDGAVAVDAASTTIEKTLLEWVTACED 283
            +LS+TCLHLASKYH+  +  + +FG+ ++   V  LG DISLSMG VLNASFRAN  +LQ+L CA+  ESPVV ACSEWV+LCLVLL HP   D +  + +  P      +PA S  T     +   P E   +  P  S ++ A+                           ++    ++  DD    +P             V  R S    LAL ++VLARRLAR+ GPCLP  VQ  +GLG+  AL LV+ G+  ARRAFE     + + +    T A  E    GG     F GG +   + ++G  A   + TTI ++LLEW+T  ED
Sbjct:  182 LLSMTCLHLASKYHT-QDSVLEDFGSCVHRPEVHALGFDISLSMGAVLNASFRANAFSLQTLLCALSGESPVVKACSEWVSLCLVLLLHPYDEDSEHETGASPPHGRRVFSPALSASTAPLTPAPGGPTETPGSQAPSSSASATATPVTPAGASXXXXXXXXXXXXXXXXSTAAAVAWSLRNPDDGESVAPPAPHQQQQGKAGDVRGRFSRATVLALASLVLARRLARAGGPCLPPRVQATMGLGDGDALLLVSEGLRLARRAFETELCDDSQLQQHSATAAAAE----GGLRRKDFLGGEVLLEKKVEGPAASHPSGTTIARSLLEWLTDSED 510          
BLAST of mRNA_S-dermatodea_contig1066.465.1 vs. uniprot
Match: D7FYP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP4_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 9.910e-35
Identity = 108/252 (42.86%), Postives = 143/252 (56.75%), Query Frame = 0
Query:    1 MLSITCLHLASKYHSVYEEKVANFGTILNPQTVFNLGLDISLSMGTVLNASFRANPVTLQSLFCAIGKESPVVCACSEWVALCLVLLPHPRVGDGDLRSASQGPE-----------ASNPATSI--GTIGTPSSKA--APRELASTIFPGMSFASLASSSPCDQIKQQDDRRWSSPDV-------------VWCRLS----LALGAIVLARRLARSEGPCLPVHVQHALGLGNARALGLVANGILAARRAFE 220
            +LS+TCLHLASKYH+  +  + +FG+ ++   V  LG DISLSMG VLNASFRAN V+LQ+L CA+  ESPVV ACSEWV+LCLVLL HP   D +  + +  P            A+ P T    G   TP S+A  +     ST F     ++  +++    ++  DD +  +P               V  R S    LAL ++VLARRLAR+ G CLP  VQ  +GLG+  AL LV+ G+  ARRAFE
Sbjct:  195 LLSMTCLHLASKYHT-QDSVLEDFGSCVHRPEVHALGFDISLSMGAVLNASFRANAVSLQTLLCALSGESPVVKACSEWVSLCLVLLLHPYDVDSENETGASPPHGERVFSPSLSAATAPLTPAPGGPAETPGSQAPSSXXXXTSTPFTPAGASTTTAAAVAWSLRNPDDGKSVAPPAPHQQQQQHGKAGDVRGRFSRATVLALASLVLARRLARAGGACLPPRVQATMGLGDGDALLLVSEGLRLARRAFE 445          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1066.465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K008_9PHAE1.160e-3637.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYP4_ECTSI9.910e-3542.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1066contigS-dermatodea_contig1066:11672..14950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1066.465.1mRNA_S-dermatodea_contig1066.465.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1066 11672..14973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1066.465.1 ID=prot_S-dermatodea_contig1066.465.1|Name=mRNA_S-dermatodea_contig1066.465.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=842bp
MLSITCLHLASKYHSVYEEKVANFGTILNPQTVFNLGLDISLSMGTVLNA
SFRANPVTLQSLFCAIGKESPVVCACSEWVALCLVLLPHPRVGDGDLRSA
SQGPEASNPATSIGTIGTPSSKAAPRELASTIFPGMSFASLASSSPCDQI
KQQDDRRWSSPDVVWCRLSLALGAIVLARRLARSEGPCLPVHVQHALGLG
NARALGLVANGILAARRAFEEGEEEDMDGTVANVEREGNGGDGSGAFAGG
MAFGRLLDGAVAVDAASTTIEKTLLEWVTACEDDSPICQLNTADGDDPST
PEQGAHATLDSLPPDATLKRRGSGSIDDGSVDFVRGFSLAVEGVNTAGSD
NSMAYSSSCRSNSVSNTGTSTIEGKDGSNTGNESASSVSSSVRNGPTPSY
RSPSTSGSRRCEDSSFWTAYGGEKSLAGTSTSYDEEGSQSPYSPPSPLTM
SGIKAMRESIPWNLRTPADQCSSPYYQHDEEDPGAPLFFLSSDQEINGDD
DRLSPSPHRPLSPLVPLSTGCGILASQPGATDRGPAGRKRDAAENSNDCG
RKGSFAVNKRPKSTTSSESLSSQRLRLLRSASNPEEERDARCKIMIDRLV
VALELDCGCSFCNLRGGGDPKSRMGDGDEGVVKTNNPLPSTAAFSSCAQG
FTERTECMENRAATAGTSGRAKMDSSIDCRSQYLQEETATSGTRPVHDPL
LRLSAAEMSTHTPSGSGDDLSPKYGITKSTPNAHVTGVRLMPASANSGAP
DNSADSDGIGWAGSGIAGDTNSFGGVEAPLPEVTRALPSSCSSSYVSFAG
KSPQKMQDSATAMSARARPLPGCSSASARVGFTEWKRAPTH*
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