mRNA_S-dermatodea_contig1066.463.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: D7FYP5_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP5_ECTSI) HSP 1 Score: 265 bits (678), Expect = 1.550e-89 Identity = 126/139 (90.65%), Postives = 133/139 (95.68%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPPTECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQKV 420
TTGVTVNDEAVEMFNAFKLHRAPHDNR+F+YKIEND EI+VDTFGDKTKTYDDFTACLPP ECRYGVFDLDFTT DGR+ NKLIFISWSPD AKIKNKMVYAASKEAIK+AL+G+GIHLQATDQGELELDYIK QVQKV
Sbjct: 2 TTGVTVNDEAVEMFNAFKLHRAPHDNRYFIYKIENDAEIIVDTFGDKTKTYDDFTACLPPNECRYGVFDLDFTTRDGREANKLIFISWSPDTAKIKNKMVYAASKEAIKSALMGIGIHLQATDQGELELDYIKSQVQKV 140
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: A0A836CHD0_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD0_9STRA) HSP 1 Score: 175 bits (444), Expect = 7.110e-54 Identity = 84/140 (60.00%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKI-ENDCEIVVDTFGDKTKTYDDFTACLPPTECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQKV 420
+TG+ VNDE V FN FKL + P + R++VYKI +N EIV+DTFG++ TYDDF + LPP ECRYG+FDLD+ T DGR +KL+FI+W+PD A +KNKM+YA SKE+IK ALVGVG+HLQA D ELEL I VQ++
Sbjct: 2 STGIIVNDEVVTQFNLFKLKKEPCNYRYYVYKISDNGQEIVIDTFGERDATYDDFCSKLPPKECRYGLFDLDYDTKDGRSSSKLVFIAWTPDEAAVKNKMMYAGSKESIKGALVGVGVHLQACDASELELATILSSVQRI 141
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: A0A836C9C2_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C2_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.250e-52 Identity = 87/140 (62.14%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 7 TGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKI-ENDCEIVVDTFGDKTKTYDDFTACLPPTECRYGVFDLDFTT-LDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQKV 420
TGV+VND V FN FKL + P ++RF++YKI +N EIV+D FG + KTYDDF ACLPP ECRYG+FDL++TT + R KLI I+W+PD AKIKNKM+YA SK+A+K+ALVGVGIHLQATD ELEL YI V ++
Sbjct: 221 TGVSVNDAVVTQFNNFKLKKEPDNHRFYIYKISDNGAEIVIDQFGTREKTYDDFVACLPPNECRYGLFDLEYTTKTESRPVEKLILIAWTPDTAKIKNKMMYAGSKDALKSALVGVGIHLQATDASELELQYIINSVSRI 360
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: A0A067C057_SAPPC (ADF-H domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C057_SAPPC) HSP 1 Score: 163 bits (413), Expect = 3.920e-49 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPPT--ECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQK 417
++GV V+D+ V FN FKL +AP++ R+F+YKIE D EIV++ G++++TYDDF A L T ECRYG+ DLDFTT DGR +KL+FISWSPD A++K+KM+YA+SKEAIK LVGVGI+L ATD EL I+ V K
Sbjct: 2 SSGVGVSDDVVTEFNDFKLQKAPYNFRYFIYKIEGDSEIVIEHRGERSETYDDFAAKLNATTNECRYGLIDLDFTTKDGRPTSKLVFISWSPDTARVKSKMLYASSKEAIKRGLVGVGIYLSATDASELSFSSIQDGVSK 141
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: A0A1V9ZSG9_9STRA (Actin-depolymerizing factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSG9_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.190e-48 Identity = 81/140 (57.86%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPPT--ECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQK 417
++GV V+D+ V FN FKL RAP++ R+F+YKIEN E+V++ G++T+TY+DF L ECRYG+ DLDFTT DGR +KL+FISWSPD AKIK+KM+YA+SKEAIK LVGVGI+L ATD EL + I+ V K
Sbjct: 4 SSGVGVHDDVVTEFNDFKLQRAPYNFRYFIYKIENSSEVVIEHRGERTETYEDFATKLKSIGDECRYGLIDLDFTTKDGRPTSKLVFISWSPDTAKIKSKMLYASSKEAIKRCLVGVGIYLSATDASELSMAAIEDGVSK 143
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: A0A1V9ZGW8_9STRA (Actin-depolymerizing factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGW8_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.190e-45 Identity = 79/140 (56.43%), Postives = 106/140 (75.71%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPP--TECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQK 417
++GV V+D+ + FN FKL RAP++ R+F+YKIE+D EIV++ G+++++Y+DF L +ECRYG+ DLDFTT DGR +KL+FISWSPD +KIK+KMVYA+SKEAIK LVGVGI+L ATD EL I+ V K
Sbjct: 2 SSGVGVHDDVISEFNDFKLQRAPYNFRYFIYKIEHD-EIVIEHRGERSESYEDFANKLLEIQSECRYGLIDLDFTTKDGRPTSKLVFISWSPDTSKIKSKMVYASSKEAIKRCLVGVGIYLSATDASELAFSAIEDGVSK 140
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: G4ZB87_PHYSP (ADF-H domain-containing protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=G4ZB87_PHYSP) HSP 1 Score: 153 bits (387), Expect = 3.500e-45 Identity = 75/140 (53.57%), Postives = 101/140 (72.14%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPP--TECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQK 417
++GV V+DE + FN FKL RAPHD R+F+YKI +D EIV+++ G +++Y D L +CRY + DLD TT DGR +K++F+SWSPD A+IK+KM+YA+SKEAIK L+GVGIHL ATD EL L+ I+ V K
Sbjct: 2 SSGVGVDDEVITQFNDFKLKRAPHDYRYFIYKIVDDSEIVIESTGPSSESYQDMADKLAQITNDCRYALVDLDLTTKDGRPTSKIVFLSWSPDTARIKSKMLYASSKEAIKRVLMGVGIHLTATDASELSLESIEDGVSK 141
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: K0SV25_THAOC (ADF-H domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SV25_THAOC) HSP 1 Score: 153 bits (386), Expect = 4.820e-45 Identity = 69/130 (53.08%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPPTECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELD 393
+TGV V+DE FN FKL + P+ R+F+Y+I+N EIV+ + GD++KTY+DF LP +CRYG+ D++F T DGR +K++FISW+PD A I+ KM+Y+ SKEA+K+ALVGVGIH+ ATD EL+ +
Sbjct: 2 STGVAVSDEVSTSFNKFKLGQEPYKLRYFIYEIKNKKEIVISSQGDRSKTYEDFVEELPENDCRYGLIDIEFETDDGRPTSKIVFISWNPDTASIRPKMLYSGSKEALKSALVGVGIHINATDHSELDFE 131
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: A0A484DQW3_BRELC (ADF-H domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQW3_BRELC) HSP 1 Score: 151 bits (382), Expect = 2.010e-44 Identity = 74/140 (52.86%), Postives = 100/140 (71.43%), Query Frame = 1
Query: 4 TTGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPPT--ECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELDYIKQQVQK 417
++GV V D+ + FN FKL RAPHD R+F+YKIE D EIV+++ G +++Y D L ECRY + DLD T+ DGR +K++F+SWSPD A+IK+KM+YA+SK+AIK LVGVGIHL ATD EL + I++ V K
Sbjct: 2 SSGVGVKDDVITQFNDFKLKRAPHDYRYFIYKIEEDSEIVIESTGLSSESYQDMADKLAQITDECRYALVDLDLTSKDGRPTSKIVFLSWSPDTARIKSKMLYASSKDAIKRVLVGVGIHLTATDASELSFESIEEGVSK 141
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Match: A0A7S1D6V8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6V8_CYCTE) HSP 1 Score: 149 bits (375), Expect = 2.260e-43 Identity = 69/129 (53.49%), Postives = 92/129 (71.32%), Query Frame = 1
Query: 7 TGVTVNDEAVEMFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPPTECRYGVFDLDFTTLDGRQGNKLIFISWSPDVAKIKNKMVYAASKEAIKAALVGVGIHLQATDQGELELD 393
TGV V D+ FN FKL R R+F+Y IEN IV++ G+++KTYDDF A LP +CRYG+ DL+F T DGR +K++FISW+PD A ++ KM+Y+ SKEAIK+ L GVGIH+ ATD EL+L+
Sbjct: 3 TGVIVGDDVSFAFNEFKLQRGDFKLRYFIYSIENKKTIVIEKQGERSKTYDDFVADLPENDCRYGLIDLEFETDDGRPTSKIVFISWNPDTASVRPKMLYSGSKEAIKSVLTGVGIHINATDYSELDLE 131 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1066.463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1066.463.1 >prot_S-dermatodea_contig1066.463.1 ID=prot_S-dermatodea_contig1066.463.1|Name=mRNA_S-dermatodea_contig1066.463.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=128bp MFNAFKLHRAPHDNRFFVYKIENDCEIVVDTFGDKTKTYDDFTACLPPTEback to top mRNA from alignment at S-dermatodea_contig1066:4703..5672- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1066.463.1 ID=mRNA_S-dermatodea_contig1066.463.1|Name=mRNA_S-dermatodea_contig1066.463.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=970bp|location=Sequence derived from alignment at S-dermatodea_contig1066:4703..5672- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1066:4703..5672- >mRNA_S-dermatodea_contig1066.463.1 ID=mRNA_S-dermatodea_contig1066.463.1|Name=mRNA_S-dermatodea_contig1066.463.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at S-dermatodea_contig1066:4703..5672- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |