prot_S-dermatodea_contig1006.45.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1006.45.1
Unique Nameprot_S-dermatodea_contig1006.45.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length187
Homology
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BLAST of mRNA_S-dermatodea_contig1006.45.1 vs. uniprot
Match: A0A6H5JSR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR7_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.920e-64
Identity = 126/188 (67.02%), Postives = 156/188 (82.98%), Query Frame = 0 
Query:    1 QVPLAIQSEQLLRGRKVFEEVSSFAKEKVQVEEKTAHAVLRAGRLGAP-ESEISGGSLQRGLVALRRFCALESRQHSILARQMQEQFQQPLEQAMGRHADLVMRAKLGVQRSVQVVQESEGRLTKAKRQLTRAQGEETAHGEALKRGRLDARANRKDLDWLAAKAARASDSARHAEATVVGERHQLLQ 187
            QVPL++QSEQL RGRKVFEE+SS+AK+K Q+E+ TA  +LRAG+LGA  E+E++GGSLQ+GL+ LR F A ESRQHS LARQMQEQF QPLEQAM RHA+LVMRAK+GVQRS Q+VQE+E RL KAKRQ+TRA G+E    ++L +G  D R+++KD+DWL  KA+RA++S RHAEA V GERH LLQ
Sbjct:   34 QVPLSMQSEQLSRGRKVFEELSSYAKDKFQIEDMTARGLLRAGQLGAAAENEVAGGSLQQGLLILRHFSATESRQHSKLARQMQEQFYQPLEQAMARHAELVMRAKVGVQRSAQLVQETETRLAKAKRQVTRALGDEKGQRDSLTKGINDGRSSQKDIDWLMGKASRAAESVRHAEALVAGERHILLQ 221
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BLAST of mRNA_S-dermatodea_contig1006.45.1 vs. uniprot
Match: D7G383_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G383_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 7.930e-37
Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 0 
Query:    1 QVPLAIQSEQLLRGRKVFEEVSSFAKEKVQVEEKTAHAVLRAGRLGAPESEISGGSLQRGLVALRRFCALESRQHSILARQMQEQFQQPLEQAMGRHADLVMRAKLGVQRSVQVVQESEGRLTKAKRQLTRAQGEETAHGEALKRGRLDARANRKDLDWLAAKA 164
            QVPL++QSEQL RGRKVFEE+SS+AK+K Q+E+ TA  +LRAG+LGA                                   + +F QPLEQAM RHA+LVMRAK+GVQRS Q+VQE+E RL KAKRQ+TRA G+E    ++L +G  D R+++KD+DWL  KA
Sbjct:   34 QVPLSMQSEQLSRGRKVFEELSSYAKDKFQIEDMTARGLLRAGQLGAAA---------------------------------ENEFYQPLEQAMARHAELVMRAKVGVQRSAQLVQETETRLAKAKRQVTRALGDEKGQRDSLTKGINDGRSSQKDIDWLMGKA 164
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1006.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSR7_9PHAE1.920e-6467.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G383_ECTSI7.930e-3750.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 8..181
e-value: 1.9E-12
score: 49.0
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 12..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1006contigS-dermatodea_contig1006:12526..23246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1006.45.1mRNA_S-dermatodea_contig1006.45.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1006 12526..23247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1006.45.1 ID=prot_S-dermatodea_contig1006.45.1|Name=mRNA_S-dermatodea_contig1006.45.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=187bp
QVPLAIQSEQLLRGRKVFEEVSSFAKEKVQVEEKTAHAVLRAGRLGAPES
EISGGSLQRGLVALRRFCALESRQHSILARQMQEQFQQPLEQAMGRHADL
VMRAKLGVQRSVQVVQESEGRLTKAKRQLTRAQGEETAHGEALKRGRLDA
RANRKDLDWLAAKAARASDSARHAEATVVGERHQLLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf