prot_S-dermatodea_contig1055.386.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1055.386.1
Unique Nameprot_S-dermatodea_contig1055.386.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length405
Homology
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BLAST of mRNA_S-dermatodea_contig1055.386.1 vs. uniprot
Match: D8LE89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE89_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 4.950e-46
Identity = 189/413 (45.76%), Postives = 225/413 (54.48%), Query Frame = 0 
Query:   24 MKLDWLDKIMNAGVVRQTYPPPH---------AGIPLQASSTASASNXXXXXXXXEAATVHQASRVPR-----HASSTWLQGPLRDCARGGNDDGALARSLLDAGAATDQTDTAGRRPLHWAAMRGNASVCLAXXXXXXXXXXXXXXXXXXXXCAKDAAIVEILIDRIE------------RAPHQASAPAGXXXXXXXXXGAA----DGV-STVNAMNAYGSTALHRAAFHGREGCLIALLKGGAGVSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESAKAFDDSTPWSELATAESTHRPGHSGVARVSALLNMARARSAWGRRGWLLMLQAARRR-VSEGKADGEKSSDMSVEIQEAGVGRALGSSFFGAAIPEEFVSGNDNSDLTASVHRLLALGEGGCFRLVVSFL 404
            M + W + +++ G V+Q + P H         AG P+++     A+N        +A          +      AS TWLQ PLRDCAR  +DDGALARSLLDAGA T+  D+ GR PLHWA  RGN +V LAXXXXXXXXXXXXXXXXXXXX               E              P    APA           A     +GV S V+A N YGSTALHRAAF+GREG ++ALL+GGA V V      XXXXXXXXXXXXXXXXXXXXXXX ESA A D STPWS+LA A  T   G   VA+ + LLN AR   AW RRGWLLML+    R V E +A         +++   G          GA    E   G D + L   V++L+ +GE GCFRLVV FL
Sbjct:    9 MNMAWFNDMISKGFVKQRHLPQHTGGPPAAGHAGSPIESILNPDAANENRSPDSDQAXXXXXXXXXXQVQETGAASRTWLQSPLRDCARNADDDGALARSLLDAGAPTNFFDSTGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPPGNVPASLVAPALEAEELSWPMAAPMPQQNGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRXXXXXXXXXXXXXXXXXXXXXXXXESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKHNRGVFEAEA---------IDLDGRG----------GACSDMEDGQGEDFARL---VNQLVGIGEEGCFRLVVGFL 399
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1055.386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE89_ECTSI4.950e-4645.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 262..276
score: 39.6
coord: 124..139
score: 38.64
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 123..155
e-value: 0.15
score: 21.1
coord: 156..183
e-value: 1300.0
score: 4.0
coord: 213..242
e-value: 0.039
score: 23.1
coord: 246..275
e-value: 0.042
score: 23.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 123..155
score: 11.541
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 213..245
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 246..278
score: 11.14
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 70..189
e-value: 3.7E-19
score: 70.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 194..338
e-value: 8.4E-21
score: 76.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 92..285
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 96..176
e-value: 1.7E-8
score: 34.9
coord: 211..275
e-value: 1.0E-9
score: 38.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 92..283
score: 31.537
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 88..172
coord: 206..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1055contigS-dermatodea_contig1055:18163..21939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1055.386.1mRNA_S-dermatodea_contig1055.386.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1055 17102..21955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1055.386.1 ID=prot_S-dermatodea_contig1055.386.1|Name=mRNA_S-dermatodea_contig1055.386.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=405bp
MVVSVALQGSNKEDQVRSVMNVQMKLDWLDKIMNAGVVRQTYPPPHAGIP
LQASSTASASNSGAAPSTGEAATVHQASRVPRHASSTWLQGPLRDCARGG
NDDGALARSLLDAGAATDQTDTAGRRPLHWAAMRGNASVCLALLDAGADG
GAPDRTGKTPLHCAKDAAIVEILIDRIERAPHQASAPAGAGQGQGASAGA
ADGVSTVNAMNAYGSTALHRAAFHGREGCLIALLKGGAGVSVVGKSGRTA
LHLACRNAHPGCVKILLAWGADESAKAFDDSTPWSELATAESTHRPGHSG
VARVSALLNMARARSAWGRRGWLLMLQAARRRVSEGKADGEKSSDMSVEI
QEAGVGRALGSSFFGAAIPEEFVSGNDNSDLTASVHRLLALGEGGCFRLV
VSFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom