mRNA_S-dermatodea_contig10543.381.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig10543.381.1
Unique Name	mRNA_S-dermatodea_contig10543.381.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig10543.381.1 vs. uniprot
Match: A0A6H5JDF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF5_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 5.820e-97
Identity = 312/741 (42.11%), Postives = 356/741 (48.04%), Query Frame = 1

Query:  331 LWRHECSRYASSSRIGYHPNHPSGRHPGSRPSSATTILLPFSATQGEQK--------QQRANSAVTSSSLPLTDEQTKYADDRDTGLERVGGRV----GARPSSAVPCLGNASHAVDGDGVSVTPHSRRGFSAS---GRGGGTTTAGSRGRGRVLGDKSG-----RRESPTRSSL---QQEETSFEDEGGAVYDDIYEDLDDEDDGELDNRISIMENRFSTAGRERPTSAVGLDGGAVPIGDAVGVQ---------RRIQGLTVPRSA--RRPPRVP-----------------------PQASHI--AAADAPTRTGGVRK-------------TGESRAARVIKTRPLSAPADGSLF---YTRG---CSDPMAALHARRIRLALSSAGSENYHSAVGGQGVGLETGTRQSQRESPAVRDVTTAVLSWDRHRDGGNRPVSSAT-------------------------TELATGSDAVD--TPPIPGGPNRSRPSSAAFRRWMEARPSARSAISAVSSARTLGLDDPELLHLQVEMESRRGGMSESTLARMEQHYNAVVQKND--PVRPHQLGRSKRGRPTSPRKVSAGAKSPRKGSSTGSGSKKSPRAKAPSSGRSSTPSKGKVTKKXXXXXXXXXXXPSKSRGRDNPALTPRRVYSSARAFIAEHFPSEERQAVSVLGLEQEQECLYASDALLRAGVSVSRETLRRALVIPTDRPLEACLAGLPLPMEGLRDKPFPLP 2232
            LWRHECSRYASSSRIGYHPNHPS  HP SRPSSA TIL PFSA +  Q+        QQRA+SA+   S P   +   Y   ++  +E   GR       RP SA+P L  A  A   D  S     +RG SAS   G  GG     +                 R  S TRS      Q+ +S E  GG    D        DDGEL+ RISIME+RFST GRERP SA   D G V  GD   +          RR      P S   +RPPR                         P   H+  +A  A TR G   +             +G+ +  RVI++RP SAPADGS       RG    +DPMA LH RR+RL +SS GS                              V TAV SWDR+ DGG RP+SSAT                         TE   G    +  TPP+    N SRPSSAAFR W++ARP ARSA+SAVSSARTLG+DDPEL+HLQ+EMESRRGGMSESTL RME HY AVV KN   P RP Q    +RGRP                                                XXXXXXXXXXX               +VY+SA AF+AEHFPSEE           EQEC  AS+AL RAG+SVS E LRRALVIPTDRPLE CLAGLP P EGLRD PFP P
Sbjct:    3 LWRHECSRYASSSRIGYHPNHPSASHPTSRPSSAATILRPFSAGRVPQQSNDHDHHQQQRASSALPPRSQPFGQDSGLYEAGQNRTIEEGAGRADLTPSVRPRSAIPRLQRADAAEPDDNNS---RPKRGVSASAARGNDGGVDATSTXXXXXXXXXXXXXXXXMRSASTTRSQSPVNNQDRSSVEGWGGDDVFDXXXXXXXXDDGELEARISIMESRFSTVGRERPVSAA--DDGDVTAGDGGNLDAERQRWSGARRTGAPDAPLSTATQRPPRAXXXXXXXXXXXXXXXXXQMFSRSRPARRHVTSSARAAGTRAGEDSREQQRLLFPLKTFVSGQKQPPRVIRSRPTSAPADGSSLPQERQRGDVAVNDPMAPLHTRRMRLQMSSGGSRP------------PAEXXXXXXXXXXXAGVKTAVPSWDRNVDGGTRPLSSATDGAPGAAXXXXXXAAVYDDNVADGDTEEGGGRFKPNEITPPMN---NHSRPSSAAFRGWIKARPGARSAVSAVSSARTLGMDDPELVHLQLEMESRRGGMSESTLVRMEDHYTAVVLKNTIVPRRPQQ----QRGRPAXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTAASGKVYTSAGAFMAEHFPSEE-----------EQECRKASEALSRAGLSVSSEALRRALVIPTDRPLETCLAGLPHPTEGLRDAPFPPP 696

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BLAST of mRNA_S-dermatodea_contig10543.381.1 vs. uniprot
Match: D8LKE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE2_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 2.020e-58
Identity = 228/664 (34.34%), Postives = 259/664 (39.01%), Query Frame = 1

Query:  310 SRRDSNALWRHECSRYASSSRIGYHPNHPSGRHPGSRPSSATTILLPFSATQGEQKQQ--------RANSAVTSSSLPLTDEQTKYADDRDTGLERVGGRV----GARPSSAVPCLGNASHAVDGDGVSVTPHSRRGFSASGRGGGTTTAGSRGRGRVLGDKSGRRESPTRSSLQQEETSFEDEGGAVYDDIYEDLDDEDDGELDNRISIMENRFSTAGRERPTSAVGLDGGAVPIGDAVGVQRRIQGLTVPRSARRPPRVPPQASHIAAADAPTRTGGVRKTGESRAARVIKTRPLSAPADGSLFYTRGCSDPMAALHARRIRLALSSAGSENYHSAVGGQGVGLETGTRQSQRESPAVRDVTTAVLSWDRH--------RDGGNRPVSSATTELATGSDAVDTPPIPGGPNRSRPSSAAFRRWMEARPSARSAISAVSSARTLGLDDPELLHLQVEMESRRGGMSESTLARMEQHYNAVVQKND--PVRPHQLGRSKRGRPTSPRKVSAGAKSPRKGSSTGSGSKKSPRAKAPSSGRSSTPSKGKVTKKXXXXXXXXXXXPSKSRGRDNPALTPRRVYSSARAFIAEHFPSEERQAVSVLGLEQEQECLYASDALLRAGVSVSRETLRRALVIPTDRPLEACLAGLPLPMEGLRDKPFPLPP 2235
            SRR+S  LWRHECSRYASSSRIGYHPNHPS  HP SRPSSA TIL PFSA +  Q+             SA+   S  L  E   Y   ++  +E   GR      ARP SA+P LG A  A   D  S T   +RG S                                                                                                                                                                                            S   +++  S  GG+G  +                                    +GG R   + TT              P   N SRPSSAAFR W++ARP ARSA+SAVSSARTLG+DDPEL+HLQ+EMESRRGGMSESTLARME HY AVV KN   P RP Q    +RGRP SPR                                            XXXXXXXXXXX               +VY+SA AF+AEHFPSEE+Q VS+LG+EQE+EC  ASDAL R G+SVS E LRRALVIPTDRPLE CLAGLP P EGLRD PFP PP
Sbjct:    6 SRRESMVLWRHECSRYASSSRIGYHPNHPSASHPTSRPSSAATILRPFSAGRVPQQSYDXXXXXXXXXXSALPPRSQTLGQESGLYEAGQNRTIEEGAGRADLAPSARPRSAIPRLGRADAAEPDDDSSRT---KRGVSXXXX--------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLNNQDRSSGEGGEGDDVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNTEEGGGRLKPNETT--------------PSMNNHSRPSSAAFRGWIKARPGARSAVSAVSSARTLGMDDPELVHLQLEMESRRGGMSESTLARMEDHYTAVVLKNTSAPRRPQQ----QRGRPASPRXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTAASGKVYTSAGAFMAEHFPSEEKQGVSLLGMEQEEECRNASDALSRVGLSVSNEALRRALVIPTDRPLETCLAGLPHPTEGLRDAPFPPPP 490

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BLAST of mRNA_S-dermatodea_contig10543.381.1 vs. uniprot
Match: A0A836C9T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T7_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.270e-9
Identity = 52/144 (36.11%), Postives = 72/144 (50.00%), Query Frame = 1

Query:    7 VTVLTNIAGAVSVDRAGIDAGLRLRSAPLPENRFSGLRAWPNIQRMSPPTDETLGALPRNRGAAAEQTHQLPSSSAAAAAVRAEGIKDGIRDALNRWALQTSRRDSNALWRHECSRYASSSRIGYHPNHPSGRHPGSRPSSATT 438
            VT++T+  GAV+VDR+       L    LP N ++   A P+     P     +  L   +  + E  H L S            I + I+  L RWAL  + R++  LW+ E +RY SSSR+G+HPNHP G   GSRP SA T
Sbjct:   32 VTIVTSYYGAVAVDRS-TQKPYTLEIPELPANTYAPYGAHPHRPPPQPTPPPAVHPLLSAKAPSQELLH-LDSQ-------HVLSIHESIKQELGRWALMRAEREARLLWKMEAARYGSSSRLGHHPNHPVG---GSRPVSAAT 163

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10543.381.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10543.381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JDF5_9PHAE	5.820e-97	42.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LKE2_ECTSI	2.020e-58	34.34	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836C9T7_9STRA	5.270e-9	36.11	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10543	contig	S-dermatodea_contig10543:908..5423 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	6
Model size	2235
Cds size	2235
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10543.381.1	prot_S-dermatodea_contig10543.381.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig10543 908..5423 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924162.5011055-CDS-S-dermatodea_contig10543:907..1215	1622924162.5011055-CDS-S-dermatodea_contig10543:907..1215	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 908..1215 +
1694079060.4588246-CDS-S-dermatodea_contig10543:907..1215	1694079060.4588246-CDS-S-dermatodea_contig10543:907..1215	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 908..1215 +
1622924162.516085-CDS-S-dermatodea_contig10543:1763..2814	1622924162.516085-CDS-S-dermatodea_contig10543:1763..2814	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 1764..2814 +
1694079060.4682763-CDS-S-dermatodea_contig10543:1763..2814	1694079060.4682763-CDS-S-dermatodea_contig10543:1763..2814	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 1764..2814 +
1622924162.527513-CDS-S-dermatodea_contig10543:3302..3611	1622924162.527513-CDS-S-dermatodea_contig10543:3302..3611	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 3303..3611 +
1694079060.4778402-CDS-S-dermatodea_contig10543:3302..3611	1694079060.4778402-CDS-S-dermatodea_contig10543:3302..3611	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 3303..3611 +
1622924162.5376496-CDS-S-dermatodea_contig10543:3999..4365	1622924162.5376496-CDS-S-dermatodea_contig10543:3999..4365	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 4000..4365 +
1694079060.4879577-CDS-S-dermatodea_contig10543:3999..4365	1694079060.4879577-CDS-S-dermatodea_contig10543:3999..4365	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 4000..4365 +
1622924162.5498831-CDS-S-dermatodea_contig10543:4780..4845	1622924162.5498831-CDS-S-dermatodea_contig10543:4780..4845	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 4781..4845 +
1694079060.497985-CDS-S-dermatodea_contig10543:4780..4845	1694079060.497985-CDS-S-dermatodea_contig10543:4780..4845	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 4781..4845 +
1622924162.5608747-CDS-S-dermatodea_contig10543:5287..5423	1622924162.5608747-CDS-S-dermatodea_contig10543:5287..5423	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 5288..5423 +
1694079060.507874-CDS-S-dermatodea_contig10543:5287..5423	1694079060.507874-CDS-S-dermatodea_contig10543:5287..5423	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10543 5288..5423 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig10543:908..5423+
coding sequence from alignment at S-dermatodea_contig10543:908..5423+

protein sequence of mRNA_S-dermatodea_contig10543.381.1

>prot_S-dermatodea_contig10543.381.1 ID=prot_S-dermatodea_contig10543.381.1|Name=mRNA_S-dermatodea_contig10543.381.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=745bp
PSVTVLTNIAGAVSVDRAGIDAGLRLRSAPLPENRFSGLRAWPNIQRMSP
PTDETLGALPRNRGAAAEQTHQLPSSSAAAAAVRAEGIKDGIRDALNRWA
LQTSRRDSNALWRHECSRYASSSRIGYHPNHPSGRHPGSRPSSATTILLP
FSATQGEQKQQRANSAVTSSSLPLTDEQTKYADDRDTGLERVGGRVGARP
SSAVPCLGNASHAVDGDGVSVTPHSRRGFSASGRGGGTTTAGSRGRGRVL
GDKSGRRESPTRSSLQQEETSFEDEGGAVYDDIYEDLDDEDDGELDNRIS
IMENRFSTAGRERPTSAVGLDGGAVPIGDAVGVQRRIQGLTVPRSARRPP
RVPPQASHIAAADAPTRTGGVRKTGESRAARVIKTRPLSAPADGSLFYTR
GCSDPMAALHARRIRLALSSAGSENYHSAVGGQGVGLETGTRQSQRESPA
VRDVTTAVLSWDRHRDGGNRPVSSATTELATGSDAVDTPPIPGGPNRSRP
SSAAFRRWMEARPSARSAISAVSSARTLGLDDPELLHLQVEMESRRGGMS
ESTLARMEQHYNAVVQKNDPVRPHQLGRSKRGRPTSPRKVSAGAKSPRKG
SSTGSGSKKSPRAKAPSSGRSSTPSKGKVTKKKKKGSTRRRKSPSKSRGR
DNPALTPRRVYSSARAFIAEHFPSEERQAVSVLGLEQEQECLYASDALLR
AGVSVSRETLRRALVIPTDRPLEACLAGLPLPMEGLRDKPFPLPP

mRNA from alignment at S-dermatodea_contig10543:908..5423+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig10543.381.1 ID=mRNA_S-dermatodea_contig10543.381.1|Name=mRNA_S-dermatodea_contig10543.381.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4516bp|location=Sequence derived from alignment at S-dermatodea_contig10543:908..5423+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCGTCGGTGACAGTGTTGACCAATATCGCGGGAGCAGTGTCTGTTGACAG
GGCGGGCATCGACGCCGGGCTCCGGCTTCGCTCAGCGCCGCTGCCCGAGA
ATCGATTCAGCGGTCTTCGAGCCTGGCCAAATATACAGCGCATGTCTCCA
CCGACCGACGAGACTTTAGGCGCTCTGCCGCGAAACCGGGGGGCTGCGGC
TGAACAGACCCACCAACTGCCATCGTCCTCTGCAGCTGCGGCTGCGGTTC
GAGCGGAGGGCATCAAAGACGGCATCCGCGACGCTTTGAATCGATGGGCG
CTACAAACGTAAGTTGTTCTTGACTACTGTACACAATTGCTCGAGCACGA
CTGTGGCACCATTTAAAAACACCACGCATGAATCAGCCATAATAGGCTAG
GTCGCAAAACATCGCGAGCATAATAATCGCACAGCTATTATTTTTGTTGT
ACAACAATAGTAGTCCTGTTACAGTAGTCGTGACCATTGAAAAAGTGATC
ATAAACATACCACCAAAAGTATAGTAGATACAGGTATGATACAAGATGTG
TTTTACCGGCTGCCCCAAGCATACACTTCTAGATATCTACCTGTATGATA
GGTAGAACACGGCTTGATTAATCTTCAAGTTGCATTCCTGGTACGATATT
CACGAGGTGGTACTGCTGTAGCCGTCGTCATTAATATTTACTGCGCTTTA
GTCAACAAAAAGTAAATGTGTGAGAACTATCATCCTGACCGGCCCAAAAA
GCATCGAACTATGGCCACAACGACCGCCCTTGCATACCATGGACGTCGCT
GGTCGGGTCCGCGTATTTTTTTACCAACCACATCCCGCGACGCCTCATAT
CGGCAGGTCCCGTCGTGACTCCAATGCACTGTGGAGGCATGAGTGTTCGC
GTTACGCCTCCTCCTCCCGCATCGGGTACCATCCGAACCACCCGAGCGGG
AGGCATCCGGGATCCCGCCCGTCCTCGGCAACGACAATCCTTCTACCTTT
CTCGGCTACCCAGGGGGAACAAAAGCAACAACGGGCTAACTCTGCCGTGA
CCTCCAGCTCGCTACCGCTAACAGATGAGCAGACAAAATATGCCGACGAC
CGAGATACGGGCCTCGAACGGGTGGGAGGACGTGTGGGTGCGAGACCCAG
CTCTGCGGTTCCTTGTCTGGGCAACGCGTCGCATGCAGTCGATGGCGATG
GCGTGTCGGTAACCCCGCATTCAAGAAGAGGTTTCAGTGCTTCCGGTCGT
GGAGGTGGCACGACCACCGCCGGCTCGCGCGGCCGCGGGCGTGTTCTAGG
AGACAAGAGCGGGCGAAGAGAGAGCCCGACGCGATCGTCGTTGCAGCAGG
AAGAGACATCCTTCGAAGACGAAGGTGGGGCGGTCTACGACGACATCTAC
GAGGATCTTGACGACGAGGACGACGGTGAGCTGGACAACCGGATATCAAT
CATGGAGAACCGGTTCTCGACGGCGGGGAGAGAGAGGCCGACCTCCGCTG
TCGGCCTCGATGGCGGAGCCGTGCCGATCGGTGACGCAGTCGGCGTCCAA
CGCCGAATACAAGGGTTGACTGTCCCGCGCTCGGCGAGACGTCCGCCGCG
CGTACCACCACAAGCATCCCACATTGCTGCTGCAGATGCACCGACCAGGA
CGGGGGGCGTTCGCAAGACTGGCGAATCGCGAGCGGCGCGTGTGATTAAG
ACAAGGCCACTGTCGGCGCCGGCAGACGGTAGTCTCTTCTATACCCGCGG
CTGCAGCGACCCGATGGCGGCTCTTCACGCTCGGCGGATAAGGCTGGCAC
TGTCGTCGGCTGGTAGTGAGAACTATCACTCGGCGGTGGGGGGGCAGGGA
GTAGGGCTGGAGACTGGGACCCGACAGTCGCAGCGAGAAAGCCCCGCAGT
CAGAGACGTGAGGGGGAGTGTGTGTTTCTGTATGGTGGTATACTCACGCC
TCATTACTATTCCCGGGGCTGTCGTCGCCTTGATCCCCATTTCGGATTTT
CGGTCGCACACGAGGTCGATTTCTTCCCCAGTGTGGCTCACCTTCAGCGA
CGTATGGCAAATCCTTACAACGCGCCCCCCACTACAAATGCGCCAGCAGT
CGACGATCAGCAGCAAGCTCATGTTGCAAAGTCGCCCCTCTCCTGGGGGA
TTTTTACCTCTCCCGGTACATTTTCCTGTTTTTGTCCTCCGTCCCCCTTG
GTAGCAAACCCAACGCAAGGGTTATGCTTTTCCGCCAGTTGTAGCCCTTG
TGACAAGCAAGCAGCCTATGCTGGCAAAAGCCCGGCGCTTCGTTCCATGG
CGGATACACTGTTTTCCACCTAATTACCACGGCATGCGCCAATACGAATG
CCGTCAACTCGACCCCCCTTCGCCCACTCCTTCTCCGGTGTTCAGGTAAC
TACCGCCGTGCTTTCTTGGGACAGGCATAGAGACGGCGGAAACCGTCCAG
TCTCGAGCGCGACAACCGAACTCGCCACAGGCAGCGATGCAGTCGACACC
CCGCCCATACCAGGTGGACCAAACCGAAGTAGGCCTTCCTCGGCTGCCTT
CAGGCGCTGGATGGAGGCGCGGCCGAGTGCCCGCTCGGCGATTTCTGCCG
TCTCCTCTGCGAGAACCCTGGGCCTGGACGACCCCGAACTCCTGCACCTG
CAAGTCGAGATGGAGAGTCGGAGAGGAGGGATGTCAGAGTCAACGCTTGC
TCGGGTACGTGGATTGTAAGCACGCGTCGAGCAGGAGGGGGAGGGGGGGC
AAAACAAAATACTTACTTGTACGTGTTTCCAACCCCTTCGTCTCCGTCGA
CAATGGAGAATCATGTCAAATATAGTATTGGCCGCACAGTTCTTTTACGA
GTTTTTTGCGAAAGTGTGTCCTTTCGCGACTACGATGCACAGGTGGGGCG
GATCTTTTTATGTCCCTGCCCGACGGCGTGTTGGTAGCGCAGCTCGATGA
CCCTGTCCATCAACGGACCTGTTGGCCTCATGATCCTCTACGTTCAGAGC
ATGGTCCAGATTATCTCGACTCTCGTACCTCTTCTGCCATGTACCCCACG
GTTTTACGCGACTTCTTCTCATTACACACCACACGGGCGCAGATGGAACA
GCATTACAATGCCGTCGTTCAAAAGAACGACCCTGTTAGACCACATCAGC
TTGGTCGGAGCAAAAGAGGGCGGCCGACGTCGCCACGAAAGGTAAGCGCC
GGTGCCAAAAGTCCCAGAAAAGGTTCATCCACCGGTTCCGGCTCGAAGAA
GTCGCCTAGAGCGAAAGCCCCGTCGAGCGGCAGAAGCAGCACTCCAAGCA
AAGGCAAGGTGACAAAAAAGAAGAAGAAGGGTTCAACTCGGCGAAGGAAG
AGTCCAAGCAAGAGCAGGGGTAGAGATAATCCCGCACTGACGCCACGGAG
GGTGTACTCGTCGGCTCGGGCGTTTATCGCCGAACACTTTCCCTCAGAAG
AACGCCAGGTGTGGGGTTAGCGCCAGGAGTTGTTGGAAGTACGGTTCCAA
CACATACAGCGCTGTTCGAAGGCTCGTTCGGCGATAAACAATGGTGTTGC
GCTTGGCCCACGGGGCCCACCACGTGTGAAAGTACCATTGTTTGCTCCAG
CGCCGAAGGTTGGCTCTCGATGGGCACGCGGTGTAAGTGTAACCTTGCCG
TCAATACAATATCGCAGATCGTTTGTGTGTAGGTCTTTGTGCAGCTGGTT
CTGCTGCCTTTTGGCGAATACGACACACCGCCAAACGCGGGAAGGCGAGT
TTGCGCGCACCGTGCTTCAACCCACCCGCCTATCACCGCCCAAATCACCG
CTGCGTTCGCGCTTACCTGACGTCTAGGTGTGTATTTGTCATCGTTGATG
CACCTGACGTTTGGTATTTGCAGGCCGTGAGCGTTCTGGGTCTGGAGCAA
GAACAAGAGTGTCTCTACGCATCCGACGCTCTCTTAAGGTGAGAGGCATC
CACAGCTACCGTTTGCCAGCAAGTTATTAAAAGTCGCGCGATGGTTGACA
ACTGTTGTGGCTAAGGAGATCAGCCTCCTTTTGCACTTGAACTCTTCGCG
TGCACGGCTCGAGGGCGAGATGCCCGTTTAGACACAGTACTGCAAGGCGC
GTAGGAAAAAGTAACAACCTGGCAGACTTTGCATGCAAGCATAGCCGGTG
AAAACAGCTACCACCTATCGCTTACTACACGATACGCCACAAAACAAAAT
ACATCGTTTCCTCCATCCAAAATGTCCGACCTCACGACGCAATCGCAACG
CTCCCACCCGATCCGTGCCCTTGTCGCTCACAACCCTCTGTCTGGGAATC
ACTTCCTCCTTGGCCGGAATTCTGCCCGCCATGTGTACCAACCATCAACG
GTGACATAAATGGACAAAAACGAACTCAAGGGCCGGCGTGTCGGTTTCAC
GCGAGACGCTTCGTCGCGCCTTGGTCATCCCCACGGACCGCCCTTTGGAG
GCCTGCCTCGCAGGCCTCCCTCTCCCAATGGAAGGGCTCCGCGACAAGCC
TTTCCCGTTGCCACCG

Coding sequence (CDS) from alignment at S-dermatodea_contig10543:908..5423+

>mRNA_S-dermatodea_contig10543.381.1 ID=mRNA_S-dermatodea_contig10543.381.1|Name=mRNA_S-dermatodea_contig10543.381.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4470bp|location=Sequence derived from alignment at S-dermatodea_contig10543:908..5423+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCGTCGGTGACAGTGTTGACCAATATCGCGGGAGCAGTGTCTGTTGACAG
GGCGGGCATCGACGCCGGGCTCCGGCTTCGCTCAGCGCCGCTGCCCGAGA
ATCGATTCAGCGGTCTTCGAGCCTGGCCAAATATACAGCGCATGTCTCCA
CCGACCGACGAGACTTTAGGCGCTCTGCCGCGAAACCGGGGGGCTGCGGC
TGAACAGACCCACCAACTGCCATCGTCCTCTGCAGCTGCGGCTGCGGTTC
GAGCGGAGGGCATCAAAGACGGCATCCGCGACGCTTTGAATCGATGGGCG
CTACAAACCCGTCGGTGACAGTGTTGACCAATATCGCGGGAGCAGTGTCT
GTTGACAGGGCGGGCATCGACGCCGGGCTCCGGCTTCGCTCAGCGCCGCT
GCCCGAGAATCGATTCAGCGGTCTTCGAGCCTGGCCAAATATACAGCGCA
TGTCTCCACCGACCGACGAGACTTTAGGCGCTCTGCCGCGAAACCGGGGG
GCTGCGGCTGAACAGACCCACCAACTGCCATCGTCCTCTGCAGCTGCGGC
TGCGGTTCGAGCGGAGGGCATCAAAGACGGCATCCGCGACGCTTTGAATC
GATGGGCGCTACAAACGTCCCGTCGTGACTCCAATGCACTGTGGAGGCAT
GAGTGTTCGCGTTACGCCTCCTCCTCCCGCATCGGGTACCATCCGAACCA
CCCGAGCGGGAGGCATCCGGGATCCCGCCCGTCCTCGGCAACGACAATCC
TTCTACCTTTCTCGGCTACCCAGGGGGAACAAAAGCAACAACGGGCTAAC
TCTGCCGTGACCTCCAGCTCGCTACCGCTAACAGATGAGCAGACAAAATA
TGCCGACGACCGAGATACGGGCCTCGAACGGGTGGGAGGACGTGTGGGTG
CGAGACCCAGCTCTGCGGTTCCTTGTCTGGGCAACGCGTCGCATGCAGTC
GATGGCGATGGCGTGTCGGTAACCCCGCATTCAAGAAGAGGTTTCAGTGC
TTCCGGTCGTGGAGGTGGCACGACCACCGCCGGCTCGCGCGGCCGCGGGC
GTGTTCTAGGAGACAAGAGCGGGCGAAGAGAGAGCCCGACGCGATCGTCG
TTGCAGCAGGAAGAGACATCCTTCGAAGACGAAGGTGGGGCGGTCTACGA
CGACATCTACGAGGATCTTGACGACGAGGACGACGGTGAGCTGGACAACC
GGATATCAATCATGGAGAACCGGTTCTCGACGGCGGGGAGAGAGAGGCCG
ACCTCCGCTGTCGGCCTCGATGGCGGAGCCGTGCCGATCGGTGACGCAGT
CGGCGTCCAACGCCGAATACAAGGGTTGACTGTCCCGCGCTCGGCGAGAC
GTCCGCCGCGCGTACCACCACAAGCATCCCACATTGCTGCTGCAGATGCA
CCGACCAGGACGGGGGGCGTTCGCAAGACTGGCGAATCGCGAGCGGCGCG
TGTGATTAAGACAAGGCCACTGTCGGCGCCGGCAGACGGTAGTCTCTTCT
ATACCCGCGGCTGCAGCGACCCGATGGCGGCTCTTCACGCTCGGCGGATA
AGGCTGGCACTGTCGTCGGCTGGTAGTGAGAACTATCACTCGGCGGTGGG
GGGGCAGGGAGTAGGGCTGGAGACTGGGACCCGACAGTCGCAGCGAGAAA
GCCCCGCAGTCAGAGACGTCCCGTCGTGACTCCAATGCACTGTGGAGGCA
TGAGTGTTCGCGTTACGCCTCCTCCTCCCGCATCGGGTACCATCCGAACC
ACCCGAGCGGGAGGCATCCGGGATCCCGCCCGTCCTCGGCAACGACAATC
CTTCTACCTTTCTCGGCTACCCAGGGGGAACAAAAGCAACAACGGGCTAA
CTCTGCCGTGACCTCCAGCTCGCTACCGCTAACAGATGAGCAGACAAAAT
ATGCCGACGACCGAGATACGGGCCTCGAACGGGTGGGAGGACGTGTGGGT
GCGAGACCCAGCTCTGCGGTTCCTTGTCTGGGCAACGCGTCGCATGCAGT
CGATGGCGATGGCGTGTCGGTAACCCCGCATTCAAGAAGAGGTTTCAGTG
CTTCCGGTCGTGGAGGTGGCACGACCACCGCCGGCTCGCGCGGCCGCGGG
CGTGTTCTAGGAGACAAGAGCGGGCGAAGAGAGAGCCCGACGCGATCGTC
GTTGCAGCAGGAAGAGACATCCTTCGAAGACGAAGGTGGGGCGGTCTACG
ACGACATCTACGAGGATCTTGACGACGAGGACGACGGTGAGCTGGACAAC
CGGATATCAATCATGGAGAACCGGTTCTCGACGGCGGGGAGAGAGAGGCC
GACCTCCGCTGTCGGCCTCGATGGCGGAGCCGTGCCGATCGGTGACGCAG
TCGGCGTCCAACGCCGAATACAAGGGTTGACTGTCCCGCGCTCGGCGAGA
CGTCCGCCGCGCGTACCACCACAAGCATCCCACATTGCTGCTGCAGATGC
ACCGACCAGGACGGGGGGCGTTCGCAAGACTGGCGAATCGCGAGCGGCGC
GTGTGATTAAGACAAGGCCACTGTCGGCGCCGGCAGACGGTAGTCTCTTC
TATACCCGCGGCTGCAGCGACCCGATGGCGGCTCTTCACGCTCGGCGGAT
AAGGCTGGCACTGTCGTCGGCTGGTAGTGAGAACTATCACTCGGCGGTGG
GGGGGCAGGGAGTAGGGCTGGAGACTGGGACCCGACAGTCGCAGCGAGAA
AGCCCCGCAGTCAGAGACGTAACTACCGCCGTGCTTTCTTGGGACAGGCA
TAGAGACGGCGGAAACCGTCCAGTCTCGAGCGCGACAACCGAACTCGCCA
CAGGCAGCGATGCAGTCGACACCCCGCCCATACCAGGTGGACCAAACCGA
AGTAGGCCTTCCTCGGCTGCCTTCAGGCGCTGGATGGAGGCGCGGCCGAG
TGCCCGCTCGGCGATTTCTGCCGTCTCCTCTGCGAGAACCCTGGGCCTGG
ACGACCCCGAACTCCTGCACCTGCAAGTCGAGATGGAGAGTCGGAGAGGA
GGGATGTCAGAGTCAACGCTTGCTCGGGTAACTACCGCCGTGCTTTCTTG
GGACAGGCATAGAGACGGCGGAAACCGTCCAGTCTCGAGCGCGACAACCG
AACTCGCCACAGGCAGCGATGCAGTCGACACCCCGCCCATACCAGGTGGA
CCAAACCGAAGTAGGCCTTCCTCGGCTGCCTTCAGGCGCTGGATGGAGGC
GCGGCCGAGTGCCCGCTCGGCGATTTCTGCCGTCTCCTCTGCGAGAACCC
TGGGCCTGGACGACCCCGAACTCCTGCACCTGCAAGTCGAGATGGAGAGT
CGGAGAGGAGGGATGTCAGAGTCAACGCTTGCTCGGATGGAACAGCATTA
CAATGCCGTCGTTCAAAAGAACGACCCTGTTAGACCACATCAGCTTGGTC
GGAGCAAAAGAGGGCGGCCGACGTCGCCACGAAAGGTAAGCGCCGGTGCC
AAAAGTCCCAGAAAAGGTTCATCCACCGGTTCCGGCTCGAAGAAGTCGCC
TAGAGCGAAAGCCCCGTCGAGCGGCAGAAGCAGCACTCCAAGCAAAGGCA
AGGTGACAAAAAAGAAGAAGAAGGGTTCAACTCGGCGAAGGAAGAGTCCA
AGCAAGAGCAGGGGTAGAGATAATCCCGCACTGACGCCACGGAGGGTGTA
CTCGTCGGCTCGGGCGTTTATCGCCGAACACTTTCCCTCAGAAGAACGCC
AGATGGAACAGCATTACAATGCCGTCGTTCAAAAGAACGACCCTGTTAGA
CCACATCAGCTTGGTCGGAGCAAAAGAGGGCGGCCGACGTCGCCACGAAA
GGTAAGCGCCGGTGCCAAAAGTCCCAGAAAAGGTTCATCCACCGGTTCCG
GCTCGAAGAAGTCGCCTAGAGCGAAAGCCCCGTCGAGCGGCAGAAGCAGC
ACTCCAAGCAAAGGCAAGGTGACAAAAAAGAAGAAGAAGGGTTCAACTCG
GCGAAGGAAGAGTCCAAGCAAGAGCAGGGGTAGAGATAATCCCGCACTGA
CGCCACGGAGGGTGTACTCGTCGGCTCGGGCGTTTATCGCCGAACACTTT
CCCTCAGAAGAACGCCAGGCCGTGAGCGTTCTGGGTCTGGAGCAAGAACA
AGAGTGTCTCTACGCATCCGACGCTCTCTTAAGGCCGTGAGCGTTCTGGG
TCTGGAGCAAGAACAAGAGTGTCTCTACGCATCCGACGCTCTCTTAAGGG
CCGGCGTGTCGGTTTCACGCGAGACGCTTCGTCGCGCCTTGGTCATCCCC
ACGGACCGCCCTTTGGAGGCCTGCCTCGCAGGCCTCCCTCTCCCAATGGA
AGGGCTCCGCGACAAGCCTTTCCCGTTGCCACCGGGCCGGCGTGTCGGTT
TCACGCGAGACGCTTCGTCGCGCCTTGGTCATCCCCACGGACCGCCCTTT
GGAGGCCTGCCTCGCAGGCCTCCCTCTCCCAATGGAAGGGCTCCGCGACA
AGCCTTTCCCGTTGCCACCG